Aara005154.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_016920715.1
- Location
- NC:77851669-77855247[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.93 5.7e+03 -3.0 1.4 14 19 224 229 224 229 0.86 2 18 0.096 5.9e+02 0.1 0.5 4 10 260 266 259 266 0.95 3 18 2.7e-08 0.00017 21.0 17.9 1 19 274 291 274 291 0.99 4 18 1.5 8.9e+03 -3.7 1.3 5 10 316 321 316 321 0.93 5 18 3.4e-06 0.021 14.3 14.7 1 19 327 346 327 346 0.97 6 18 1.6 1e+04 -3.8 0.7 6 10 371 375 370 375 0.86 7 18 2.3e-07 0.0014 18.0 19.1 1 19 381 399 381 399 0.99 8 18 1.9 1.2e+04 -4.1 0.7 6 10 425 429 424 431 0.58 9 18 1.6e-06 0.0095 15.4 13.7 1 18 435 452 435 453 0.97 10 18 3.1e-07 0.0019 17.6 17.9 1 18 487 504 487 505 0.98 11 18 9.9e-10 6e-06 25.6 13.6 1 18 514 531 514 532 0.97 12 18 2 1.2e+04 -4.4 1.1 5 10 560 565 560 565 0.78 13 18 0.0061 37 3.9 11.8 9 18 578 587 570 588 0.91 14 18 0.087 5.3e+02 0.2 5.1 3 12 601 610 590 610 0.86 15 18 0.00014 0.87 9.1 4.7 1 12 681 692 681 692 0.97 16 18 0.74 4.5e+03 -2.7 1.5 15 19 705 709 704 709 0.84 17 18 0.0014 8.7 5.9 11.6 4 18 722 736 720 737 0.93 18 18 1.6e-06 0.01 15.3 13.2 1 17 794 812 794 814 0.86
Sequence Information
- Coding Sequence
- ATGGCCAGTCGCAACCGTAACCGGGTCGCTCCGAAAGAGCAAAACGCGTGGAACATTCCGGTGCAAACGAAATCCGAATCCGACCGACAGCCGGCGCGAAAACCATCCACTGCAAACGTTTCCAAGGGCGgtgcagcggcggcggcggccacaTCGGAACCGGCCGGTATGAGCAGCTCCAAGATTCCGCTACCCTCCAGCATGTTGAAAAAGTCGCAGGAAAAGTTCAACCAGGTACAGCGGCAGCACGCCGAAACGGCCAAGAAGTATGCGGCCGAGTACGTGTcgagcgaggaggaggaggagggcgaGGACGCGAGCGGACAGGAAGCGAGTGCAGCAGCCTCGAACGATGCGGCCACGCGAAACATTCTCGGGGACGTGCTGAAGAACTACCACGGCGCCGAGGCGGACGTGGGCAAAACGCAGGAGTATTTGCAGCATCTGCTCGAATCGCGCAATGCCGTCTGCCTGATCTGCATCGAGACGGTGAAACGTGCGGACAGGATCTGGTCCTGCGCCGCGTGCTACACGTTCTTTCACCTCATGTGCATCCAGCGATGGGCTAATGATAGCATGTCGATGAAGCGCATCAATCACGAGCAGCAGGAGGGCTACTACAACAACCGGGGGGAGTACATACCGAAGCCGGCGCTCGACGTGCACTGGGACTGCCCGAAGTGTCGCCGGGAGTACGAGCCGGAGGCGATACCGCGCCATTACGAGTGCTTCTGCGGCAAGGAGCGGGAACCGAACGCCCATCCCTGGCTGATTCCGCACTCGTGCGGTGAGCCGTGCGAGAAGCAGCTTAATCCGGCCTGTGGCCATACCTGCCGGCTCCTGTGTCATCCGGGGCCGTGTCCGCCGTGTCCGCAGACGGTGAATGTGTCGTGCCGTTGCGGAAGTTCGCCCGTGAAAACGATCCGCTGTGCGCAGAAATCGTGGACTTGCGCAAGGAAGTGTAAAAGAAAACTAGCCTGTGGGATACACGAGTGCGGTGCCCAGTGTCACGACGCTGGCCAGTGTCCACCGTGCCAGAACCGCAGCAAGCAGCCGTGCCTATGTGGCGCACAGACCAAAGAGGTTAACTGTCACGAATCGCGCTGGCAGTGTGACAGTGTGTGCAATAAACCGTTCCCCTGCGGGTTGCACCACTGTGAGGGCGTGTGTCATGCTGGACCGTGCGGTCCCTGTCCCCTCGGGCTGCCACGCTCGTGTCCGTGCGGCAAGACGGAAACTCGCGCCGCCTCCTGCTCAGAGCGCATCGGCACGTGCGGTGACACGTGCGAGAAGGTGCTTGCTTGCGGACAGCATCTCTGCCCGGAACGGTGCCACCAGGGCGCGTGTGGCAACTGTCTGGAGCTCGTGCCGAAGGTGTGTCGGTGTGGCTCGACCAAGAAACCGATCGTGTGTCACCGGGAAGCGATCTGCGAGGGTCGCTGCAAGCGGACGCGCACCTGCGGCAAACACCAGTGCAATCGGAAGTGTTGCGATGGCCAATGTCCGCCCTGTGATAGGGTGTGCGGGAAGACGCTACCGTGCGGGAAGCACAAGTGCAGCTCGCTCTGCCACCAGGGCCCGTGCTATCCTTGCAATCAGAAATCCACGATCAAGTGTCGCTGTGGCGGTACCGTGGCCGAGGTGGCATGCGGTCGGGAAAGGAAAGCGAACGCACCGAAGTGCAAGCTACCGTGCCGGACTGCCTCCAAGTGTCACCATCCGAACACGCACACCTGCCACCCCGGGGACTGTCCGGCGTGCGTGCTGCCCTGCGGCCAGCCGAACGATACGACCAACTGCGAGCATCCGTGCCGGGCCAAGTGTCACGATGCGGTGCAGGTGGTGACGCGGGAGAAAAACTTCAAACCCGTCGGCCCGTGGGACGTGCCGAAGGAGACGGTCGAGGTGAAAACGCTGCCCCATCCGGCCTGCACCGTGAAGGTGCCGGTCATGTGTCTCGGTGGTCACGAAACGGCCGACTGGCCCTGCTCCAGCTCGAAACCATCGTCCTGCGGGCGGCAGTGCGGTCGGTTGCTGAAGTGCGGCGTACATCGCTGCCCGCTCGCCTGCCACAAGGTGACGCACCGGGCCAGCACGACGCAGGATTCGCGCTGTGAGCCATGCTCGGCCGGCTGCACGCTGCCCCGGCCGGAGGGTTGCGTTCACTCGTGCGCGCTGCGCTGCCACAAGCCGCCGTGCGATCCGTGCCTGGTGTCGATCAAGTCACAGTGCTACTGCGGCCTGACGCAGGTGTTTTACAAATGCCACGAGTTTTACCCCACCGGCATGGAGGGGAAGGAACCGGAAGAGTTGGCCGAGCTGGCACGGCGGCGCGAGTCGTTTCTTAGCTGTGGTCAAAAGTGTATTAAAAACTTCCCTTGTGGGCATCGCTGCACCTCCATCTGCCATCCCGGGCGCTGTCCGAATCCGGAGCAGTGCTCGAAGAAGGTAAAGGTGGCGTGCAAATGTGGCCAGCGAAAGGTGGAGGTAAGCTGCAAGGTGGCGCGTGCCACACCGACGCTCGACTGCGACCAGCAGTGTGAAGCCGTCCGGGCCCAGAagcaggaggagcaggagcgcAAGGAGCGGGAAGCACGGGCAGAGGAAGAGCTGCAGAATCAGCGCGAGCTGGAGGAGTACGAGCGCAAGTTTGGCAAGCGGAAGCACCGCGAACGGAAGCGGCACCAGGTGCAGCAGGAGGAAAAGGGAACGCATTGGGCGGTTTACGTAGCGCCAGTAGTGGCTGTGTTGATAGGTGTAGCATTGTACTTTCTGTTTGTGCAATAA
- Protein Sequence
- MASRNRNRVAPKEQNAWNIPVQTKSESDRQPARKPSTANVSKGGAAAAAATSEPAGMSSSKIPLPSSMLKKSQEKFNQVQRQHAETAKKYAAEYVSSEEEEEGEDASGQEASAAASNDAATRNILGDVLKNYHGAEADVGKTQEYLQHLLESRNAVCLICIETVKRADRIWSCAACYTFFHLMCIQRWANDSMSMKRINHEQQEGYYNNRGEYIPKPALDVHWDCPKCRREYEPEAIPRHYECFCGKEREPNAHPWLIPHSCGEPCEKQLNPACGHTCRLLCHPGPCPPCPQTVNVSCRCGSSPVKTIRCAQKSWTCARKCKRKLACGIHECGAQCHDAGQCPPCQNRSKQPCLCGAQTKEVNCHESRWQCDSVCNKPFPCGLHHCEGVCHAGPCGPCPLGLPRSCPCGKTETRAASCSERIGTCGDTCEKVLACGQHLCPERCHQGACGNCLELVPKVCRCGSTKKPIVCHREAICEGRCKRTRTCGKHQCNRKCCDGQCPPCDRVCGKTLPCGKHKCSSLCHQGPCYPCNQKSTIKCRCGGTVAEVACGRERKANAPKCKLPCRTASKCHHPNTHTCHPGDCPACVLPCGQPNDTTNCEHPCRAKCHDAVQVVTREKNFKPVGPWDVPKETVEVKTLPHPACTVKVPVMCLGGHETADWPCSSSKPSSCGRQCGRLLKCGVHRCPLACHKVTHRASTTQDSRCEPCSAGCTLPRPEGCVHSCALRCHKPPCDPCLVSIKSQCYCGLTQVFYKCHEFYPTGMEGKEPEELAELARRRESFLSCGQKCIKNFPCGHRCTSICHPGRCPNPEQCSKKVKVACKCGQRKVEVSCKVARATPTLDCDQQCEAVRAQKQEEQERKEREARAEEELQNQRELEEYERKFGKRKHRERKRHQVQQEEKGTHWAVYVAPVVAVLIGVALYFLFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104083;
- 90% Identity
- iTF_00096068;
- 80% Identity
- -