Amel012693.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- nfxl1
- Assembly
- GCA_000473525.2
- Location
- KI920971.1:8744-11865[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.93 7.3e+03 -3.1 1.4 14 19 226 231 226 231 0.86 2 18 0.096 7.5e+02 0.1 0.5 4 10 262 268 261 268 0.95 3 18 2.7e-08 0.00021 21.0 17.9 1 19 276 293 276 293 0.99 4 18 1.5 1.1e+04 -3.7 1.3 5 10 318 323 318 323 0.93 5 18 3.5e-06 0.027 14.3 14.7 1 19 329 348 329 348 0.97 6 18 1.6 1.3e+04 -3.8 0.7 6 10 373 377 372 377 0.86 7 18 2.4e-07 0.0018 18.0 19.1 1 19 383 401 383 401 0.99 8 18 1.9 1.5e+04 -4.1 0.7 6 10 427 431 426 433 0.58 9 18 1.6e-06 0.012 15.4 13.7 1 18 437 454 437 455 0.97 10 18 3.1e-07 0.0024 17.6 17.9 1 18 489 506 489 507 0.98 11 18 9.9e-10 7.7e-06 25.6 13.6 1 18 516 533 516 534 0.97 12 18 1.8 1.4e+04 -4.0 0.9 5 10 562 567 562 568 0.68 13 18 0.0061 48 3.9 11.8 9 18 580 589 572 590 0.91 14 18 0.088 6.8e+02 0.2 5.1 3 12 603 612 592 612 0.86 15 18 0.00014 1.1 9.1 4.7 1 12 683 694 683 694 0.97 16 18 0.74 5.8e+03 -2.7 1.5 15 19 707 711 706 711 0.84 17 18 0.0014 11 5.9 11.6 4 18 724 738 722 739 0.93 18 18 1.6e-06 0.013 15.3 13.2 1 17 796 814 796 816 0.86
Sequence Information
- Coding Sequence
- ATGGCCAGTCGCAACCGTAACCGGGTCGCTCCGAAAGAGCAAAACGCGTGGAACATTCCGGTGCAAACGAAATCCGAAACCGACCGACAGCCGGCGCGAAAACCATCCACTGCAAACGGTTCCAAGGGCGGTGCAGCGGCGGCGGCGGCGGCCACATCCGAACCGGCCGGTATGAGCAGCTCCAAGATTCCGCTACCCTCCAGCATGTTGAAAAAGTCGCAGGAAAAGTTCAACCAGGTACAGCGGCAGCACGCCGAAACGGCCAAGAAGTATGCGGCCAAGTACGTGTCGAGCGAGGAAGAGGAGGAGGAGGGCGTGGACGGGAGCGGACAGGAAGCGGGTGCAGCAGCCTCAAACGATGCGGCCACGCGAAACATTCTCGGAGACGTGCTGAAGAACTACCACGGCGCCGAGGCGGACGTGGGCAAAACACAGGAGTATTTGCAGCATCTGCTCGAATCGCGCAATGCCGTGTGCCTGATCTGCATCGAGACGGTGAAACGTGCGGACAGGATCTGGTCCTGCGCCGCGTGCTACACGTTCTTTCACCTCATGTGCATCCAGCGGTGGGCTAATGATAGCATGTCGATGAAGCGCATCAATCACGAGCAGCAGGAGGGCTACTACAACAACCGGGGGGAGTACATACCGAAACCGGCGCTCGACGTGCACTGGGACTGCCCGAAGTGTCGCCGGGAGTACGAGCCGGAGGCGATACCGCGCCATTACGAGTGCTTCTGCGGCAAGGAGCGGGAACCGAACGCCCATCCCTGGCTGATTCCGCACTCGTGCGGTGAGCCGTGCGAGAAGCAGCTTAATCCGGCGTGCGGCCACACCTGCCGCCTTCTGTGCCATCCGGGGCCGTGTCCGCCGTGTCCGCAGACGGTGAATGTGTCGTGCCGTTGCGGAAGTTCGCCCGTGAAAACGATCCGCTGTGCGCAGAAATCGTGGACTTGCGCAAGGAAGTGTAAAAGAAAACTAGCCTGTGGGATACACGAGTGCGGTGCCCAGTGTCACGACGCTGGCCAGTGTCCACCGTGCCAGAACCGCAGCAAGCAGCCGTGCCTATGTGGCGCACAAACCAAAGAGGTCAACTGTCACGAATCGCGCTGGCAATGTGACAGCGTGTGCAATAAACCGTTCCCCTGCGGGTTGCACCACTGTGAGGGAGTGTGTCATGCTGGACCGTGCGGTCCCTGTCCCCTCGGGCTGCCACGCTCGTGTCCGTGCGGCAAGACGGAAACTCGCGCCGCCTCCTGCTCGGAGCGCATCGGCACGTGCGGTGACACGTGCGAGAAGGTGCTTGCCTGCGGACAGCATCTCTGCCCGGAACGGTGCCACCAGGGCGCGTGCGGCAACTGTCTGGAGCTCGTGCCGAAGGTGTGTCGGTGCGGCTCGACCAAGAAACCGATCGTGTGTCACCGGGAAGCGATCTGCGAGGGTCGCTGCAAGCGGACGCGCACCTGCGGCAAGCACCAGTGCAATCGGAAGTGTTGCGATGGCCAATGTCCGCCCTGTGATAGGGTGTGCGGGAAGACGCTACCGTGCGGGAAGCACAAGTGCAGCTCGCTCTGCCACCAGGGACCGTGCTATCCTTGCAATCAGAAATCCACGATCAAGTGTCGCTGTGGCGGTACCGTGGCCGAGGTGGCATGTGGTCGGGAAAGGAAGGCTAACGCACCGAAGTGCAAGCTACCGTGCCGGGCTGCCTCCAAGTGTCACCATCCGAACACGCACACCTGCCACCCCGGGGACTGTCCGGCGTGCGTGCTGCCCTGCGGCCAGCCGAACGATACGACCAACTGCGAGCATCCGTGTCGGGCAAAGTGTCACGATGCGGTGCAGGTGGTGACGCGGGAGAAAAACTTCAAACCCGTCGGCCCGTGGGACGTGCCGAAGGAGACGGTCGAGGTGAAAACGCTGCCCCATCCGGCCTGCACCGTGAAGGTGCCGGTCATGTGTCTCGGTGGTCACGAAACGGCCGACTGGCCCTGCTCCAGTTCGAAACCATCGTCCTGCGGGCGGCAGTGCGGCCGGTTGCTGAAGTGCGGTGTACACCGCTGCCCGCTCGCCTGCCACAAGGTGACGCACCGGGCCAGCACGACGCAGGATTCGCGCTGTGAGCCGTGCTCGGCCGGCTGCACGCTGCCCCGGCCGGAGGGTTGCGTTCACTCGTGCGCGCTGCGCTGCCACAAGCCGCCGTGCGATCCGTGCCTGGTGTCGATCAAGTCACAGTGCTACTGCGGCCTGACGCAGGTGTTTTACAAATGCCACGAGTTTTACCCCACCGGCATGGAGGGGAAGGAACCGGAAGAGTTGGCCGAGCTGACACGGCGGCGCGAGTCGTTTCTTAGCTGTGATCAAAAGTGTATTAAAAACTTCCCTTGTGGGCATCGCTGCACCTCCATCTGCCATCCCGGGCGCTGTCCGAATCCGGAGCAGTGCTCGAAGAAGGTAAAGGTGGCGTGCAAATGTGGCCAGCGAAAGATGGAGGTAAGCTGCAAGGTGGCGCGCGCCACACCGACCGCGCTCGACTGCGACCAGCAGTGTGAAGCCGTCCGGGCCCAGAAGCAGGAAGAGCAGGAGCGCAAGGAGCGGGAAGCACGGGCAGAGGAAGAACTGCAGAATCAGCGCGAGCTGGAGGAGTACGAGCGCAAGTTTGGCAAGCGAAAGCACCGCGAACGGAAGCGGCACCAGGTGCAGCAGGAGGAAAAGGGAACGCATTGGGCGGTTTACGTAGCGCCAGCAGTGGCTGTGTTGATAGGTGTAGCATTGTACTTTCTGTTTGTGCAATAA
- Protein Sequence
- MASRNRNRVAPKEQNAWNIPVQTKSETDRQPARKPSTANGSKGGAAAAAAATSEPAGMSSSKIPLPSSMLKKSQEKFNQVQRQHAETAKKYAAKYVSSEEEEEEGVDGSGQEAGAAASNDAATRNILGDVLKNYHGAEADVGKTQEYLQHLLESRNAVCLICIETVKRADRIWSCAACYTFFHLMCIQRWANDSMSMKRINHEQQEGYYNNRGEYIPKPALDVHWDCPKCRREYEPEAIPRHYECFCGKEREPNAHPWLIPHSCGEPCEKQLNPACGHTCRLLCHPGPCPPCPQTVNVSCRCGSSPVKTIRCAQKSWTCARKCKRKLACGIHECGAQCHDAGQCPPCQNRSKQPCLCGAQTKEVNCHESRWQCDSVCNKPFPCGLHHCEGVCHAGPCGPCPLGLPRSCPCGKTETRAASCSERIGTCGDTCEKVLACGQHLCPERCHQGACGNCLELVPKVCRCGSTKKPIVCHREAICEGRCKRTRTCGKHQCNRKCCDGQCPPCDRVCGKTLPCGKHKCSSLCHQGPCYPCNQKSTIKCRCGGTVAEVACGRERKANAPKCKLPCRAASKCHHPNTHTCHPGDCPACVLPCGQPNDTTNCEHPCRAKCHDAVQVVTREKNFKPVGPWDVPKETVEVKTLPHPACTVKVPVMCLGGHETADWPCSSSKPSSCGRQCGRLLKCGVHRCPLACHKVTHRASTTQDSRCEPCSAGCTLPRPEGCVHSCALRCHKPPCDPCLVSIKSQCYCGLTQVFYKCHEFYPTGMEGKEPEELAELTRRRESFLSCDQKCIKNFPCGHRCTSICHPGRCPNPEQCSKKVKVACKCGQRKMEVSCKVARATPTALDCDQQCEAVRAQKQEEQERKEREARAEEELQNQRELEEYERKFGKRKHRERKRHQVQQEEKGTHWAVYVAPAVAVLIGVALYFLFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104083;
- 90% Identity
- iTF_00096068;
- 80% Identity
- -