Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055680.1:32648546-32652762[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.7 2.6e+02 2.9 7.7 2 23 243 265 242 265 0.96

2 20 0.52 50 5.1 7.2 1 23 315 337 315 337 0.98

3 20 0.2 19 6.4 2.1 1 23 386 408 386 408 0.98

4 20 0.03 2.8 9.0 0.3 1 20 462 481 462 483 0.93

5 20 0.00024 0.023 15.6 1.5 1 23 523 545 523 545 0.97

6 20 0.00082 0.079 13.9 0.1 1 23 593 615 593 615 0.97

7 20 0.00079 0.076 14.0 0.1 1 23 621 643 621 643 0.97

8 20 2e-06 0.0002 22.1 0.2 2 23 687 709 687 709 0.96

9 20 0.003 0.28 12.2 0.5 3 23 718 739 716 739 0.95

10 20 9.1e-06 0.00087 20.1 0.3 2 23 747 769 746 769 0.96

11 20 6.4e-05 0.0061 17.4 0.3 1 23 777 799 777 799 0.96

12 20 0.13 12 7.0 0.2 1 20 860 879 860 879 0.96

13 20 0.00059 0.057 14.4 0.1 2 23 899 920 898 920 0.96

14 20 0.00064 0.061 14.3 0.7 1 23 934 956 934 956 0.97

15 20 0.0019 0.18 12.8 5.5 3 23 978 999 976 999 0.91

16 20 0.033 3.2 8.9 2.0 2 23 1051 1073 1050 1073 0.93

17 20 0.0053 0.51 11.4 1.5 3 23 1104 1125 1102 1125 0.92

18 20 0.001 0.096 13.6 0.0 1 23 1132 1156 1132 1156 0.97

19 20 0.69 66 4.7 4.2 2 23 1162 1184 1161 1184 0.94

20 20 0.02 1.9 9.5 1.1 2 23 1214 1236 1214 1236 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.7	2.6e+02	2.9	7.7	2	23	243	265	242	265	0.96
2	20	0.52	50	5.1	7.2	1	23	315	337	315	337	0.98
3	20	0.2	19	6.4	2.1	1	23	386	408	386	408	0.98
4	20	0.03	2.8	9.0	0.3	1	20	462	481	462	483	0.93
5	20	0.00024	0.023	15.6	1.5	1	23	523	545	523	545	0.97
6	20	0.00082	0.079	13.9	0.1	1	23	593	615	593	615	0.97
7	20	0.00079	0.076	14.0	0.1	1	23	621	643	621	643	0.97
8	20	2e-06	0.0002	22.1	0.2	2	23	687	709	687	709	0.96
9	20	0.003	0.28	12.2	0.5	3	23	718	739	716	739	0.95
10	20	9.1e-06	0.00087	20.1	0.3	2	23	747	769	746	769	0.96
11	20	6.4e-05	0.0061	17.4	0.3	1	23	777	799	777	799	0.96
12	20	0.13	12	7.0	0.2	1	20	860	879	860	879	0.96
13	20	0.00059	0.057	14.4	0.1	2	23	899	920	898	920	0.96
14	20	0.00064	0.061	14.3	0.7	1	23	934	956	934	956	0.97
15	20	0.0019	0.18	12.8	5.5	3	23	978	999	976	999	0.91
16	20	0.033	3.2	8.9	2.0	2	23	1051	1073	1050	1073	0.93
17	20	0.0053	0.51	11.4	1.5	3	23	1104	1125	1102	1125	0.92
18	20	0.001	0.096	13.6	0.0	1	23	1132	1156	1132	1156	0.97
19	20	0.69	66	4.7	4.2	2	23	1162	1184	1161	1184	0.94
20	20	0.02	1.9	9.5	1.1	2	23	1214	1236	1214	1236	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCGGAACATGGAAAACGCGTGCAGGCTCTGCCTCTCCGTCGACGAGGCCAAGTCGTCGGTGTTCGGGATGCAGGACTCCCCGGTATCGTTGGCGGCCAAGATCCAGGCCTGCCTGTCGATCCAGATTTTATCCACGGACAGATTATCGACACAGATATGTGCACAGTGTGTTAGGAATGTGAATCAGTGGCACAATTATAAGGAAGCTTGTTTACGTTCCCAAGAAAAATTGCAGCAGTGGTTGGAGAAGCATTTGCAGTCGAGTCCGATGGTTGTAACTATCAAGGACGAACCTGTGGATCTAGATTTCTGTGAAGATAATATTGAGGTTATTTCGGAAACTACCGTTGAATCGGACTTGGAGTCGAATACTCTAGATCACAGTGTAAACAATGTAGAAAGCGATATTCACACTCATGTAATAACAGACGAGGAAGCGGATGTACAGAAAGATCAGCCAGTATTGACGAAAGATACGGATGTCCCTTTGAAACCCGAGCCCCAAGACGAGTATGATACTGACTGTACCATAGAAATAGAGTCTGTTACTGGCAGCGAGCTTGTACCGAATCCCCTTTCGAATAAAGAAGATAGGGTCATGGAGGCTGATTCTACGCAGAAGTCTAATACGTCTGGCTCGCCGAATAAGAAGAAGATCAGGCGGGGTCCACACACACACTTCCGAGGGGCTCGCGTCTACAAGCAGAAGTGTGTGCACTGTCAAATACATCTGCATTCGAAGTACTCTTACACCAAGCACATGGAGAGATTCCACACGGAGAAGCCGAATGGCAATACTGGATCTGCGGAGCTGGAGGACGCCGAGGAGCTGGTCGAGGATGTGGAGGATGAATTGATGAGTATGGAGAAGGATGCTCCCCTGACGCAAGTACAGCAAAATATCATTAGCCAATTGAAAACGTTCTCCTGCCATTCGTGCAAGCAAACGTTCCACGATCGGAGAAGCACTCTCTCCCACATCCGCCAGCACATGCCCGATCTGAGGCCGTACACGTGTATCGCGTGTCTGACGGAGTTCCCGGATCGATCGATGTACAAGTTACATTGCGGGGCGTCCTTCGAGTGCGCGATGAAAATTGCGTTGGTCGTGCCGAATCACGGCGAGGAGAAGTACTTTACATGTAACATGTGCCTGCGCTCGATGCAAAACCGAAAGCAATTGCTTAGCCACCTATCGAAACACTCTGACAAACAGTACGAAGAACTAATCTCCCCGTCGCGATCCCCCCCTAAGTTAAAGCCAATAACCCCCCTTCCCTCTCCTAAACGAGAAGTGAAAAAACCTCTGCCCGATGCTCCGATCATTCCCCATCCTTACAAAAACGGCGATCCCGCGCACAATCACATCTGCGATCTGTGCGGCATGATATACAGGTACAAGCCGAACATGTTCAAGCACAGAGATCTGTGCCAACGTCTGTTACCGGAGGTCCGTACCTCTTACAAGTGTGTCCACTGCGGTATGACCTACTTAGTGTTCAAAAAGTTCCACAATCATATCACCTTCGAGCACAAGAAGAGAGACTTCGCGTGCTCGGAGTGTAACGCCAAGTTCAGATCGCCCAGCGACTTCTTGACCCACCACGAGACGCATCGATTTGCCCGCAATAAAAAACAGTCCCTAAACTCCGAAAGCGAATCGGGGAAATCAGCGCTGAACATGCCGACCCCTATCAAAGACTGGGACACGTTCGAGGCGGAGGTGAACGCGGGAAAGATACCGGACGGTAATCAGTACAGTTGCGCCCTGTGCAACCTGGAATTTGCAACGAGGGCAGAATTGACGGAGCACAGGAACCTCCATCTCAAAGTGAAGATCTATTCCTGCGTGATTTGTCGCAGCATGTTTAGCAGCGCGGGTGCCCTGGAGATCCACATGAAGGATCACGGTATAGAGGATCCGAACGAGCGAAACGCGAATAGCTCGTGCGTGGAATATGGCAGCGTGGAGGAAGATTCCCGTGATTCAGCCACGGCAAACGCCAGCGCGACCTCCGACCCCGGCACGAACAAGAACGAGTGCGACGTGTGCGGCAAGGTCTTCTCGAATATCGCGAACGTCAAAAGACACATGAGGAACATCCATCGGCCGGGCATCGTCCACGTCAACTGCACCGACTGTTCGCGCGTGTTCAAGACCAAGGAGTTACGCGACCGGCACGTGATAACCGAGCACAAGAACAAGAAGGCGACGCTACAGTGTCCCCAATGCCCAAAGAGCTTCGTGTTCCAAGCGAATCTGAACCTGCACTTCAAGACCgcgcacagcgagaagccgcAGGGCGGTCATAAATGCGACATCTGCGGAAAGGCCTTCATCGAGGAAGCGTCTCTGAAGATACACAGGAGCTGGCACAGCAGAGTGAACTCGCGGTTGAGCATACGATTCAGAGTGGGCGAGGATCAGAAGCCTCAGATCAAGCCGCCGATCGCGCCCAAAGAGGAGCAGGTGTTTAACACCAGCTCCGATCGGCCAGCCAGAGCGCGGAAGTCGTTCCCGAACCCGCCGACCTCCGCGGCGAAGCCGCAGGGCAACTTCCAGTGTCAAGTTTGCAACGACAAGTTCAACGACGTGACAGAGCTGAGGGAACACTTGTGGGACGTGCACTGCGCCCGCAACAAGGCCGAGAGGAGTTTCATGGTGAACGAGCTGCAGTGCGAGATCTGCACGAACGTCTTCCCCGACAAACAGACGCTGGCCATGCACATGCAGTGGCACAAAGCCTACCCCATCCTCAGCGACATCAAGAACCCGAGCTTCCCGTGCGACGTTTGCGGGAAACTGTACAGCTCGAGAAAGGTGCTGATGAGACACAAGAAGCTCCACAAAGCCACGAGCGTGGCCGTCGCCAAGTGCCAATCGGAGGCCACGAAGCCCAGCCAGTGCCTGTGCAACGTCTGCCACAAGATGTTCAGCAGCAACCAGTCGCTGCAACGTCACAAGTACAACTTGCACAGCGAGATGTTCAATCGGTACCGTCCGCAGCTAATGCTCAATAGCTCGCGAAGATCGTCCCAGGAGGAGCCGAAGGCCAAGAAGGTGAAgctggaggtggaggaggaccAGAAGGGACCGTTCAATGTGAAGGCCACGGGCAAGAAGTCGGTGATGTGCCACGTCTGCAGAAAGTTCTTCCCGAACATGAGCGTGCTGTACAAGCACAAGCAGCTCACGCACAACAAGTCCCGcgtggtgaagaacatcgtgaAGGCGACGTTAGCCACCAACGAATGCGTCCCGCTGGCTGGTAACGAGGGCAAGGTCTGCTGCAACATCTGCTACAAGGAGTTCCCCGGCCTCTCGAATCTTCGCCAGCACTTCACCGTGAAACACAAGAACGCTCCGCTCAAGTACGCCTGCCCGGCGTCTGGCTGCAAGCTCACGTTCCCCACCCCCGTGGCTTTGAAGAATCACGAGATCACCCATAAAAGCATGATCTGCAATTGCAACCTGTGCGGCCGGCACATGTTCAGCAGATCAGCGATGACGGATCACATGCTCAGGTCCCACAACACTATCTACGACGCGGAGAAGAGCAAAAACTTCCACAGGGAGGCGGACCTGGCCGCGTACGTAGTGCACGGCGCTGTGGACGCCACCTGCCCCGAGTGCAAGATCAAGTATCCCAACAACAAATCCATGAAGATCCACTACTTCAAGTTCCACGAGAACGCCGGCCAGATATAG
Protein Sequence: MDEVVELRNMENACRLCLSVDEAKSSVFGMQDSPVSLAAKIQACLSIQILSTDRLSTQICAQCVRNVNQWHNYKEACLRSQEKLQQWLEKHLQSSPMVVTIKDEPVDLDFCEDNIEVISETTVESDLESNTLDHSVNNVESDIHTHVITDEEADVQKDQPVLTKDTDVPLKPEPQDEYDTDCTIEIESVTGSELVPNPLSNKEDRVMEADSTQKSNTSGSPNKKKIRRGPHTHFRGARVYKQKCVHCQIHLHSKYSYTKHMERFHTEKPNGNTGSAELEDAEELVEDVEDELMSMEKDAPLTQVQQNIISQLKTFSCHSCKQTFHDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPNHGEEKYFTCNMCLRSMQNRKQLLSHLSKHSDKQYEELISPSRSPPKLKPITPLPSPKREVKKPLPDAPIIPHPYKNGDPAHNHICDLCGMIYRYKPNMFKHRDLCQRLLPEVRTSYKCVHCGMTYLVFKKFHNHITFEHKKRDFACSECNAKFRSPSDFLTHHETHRFARNKKQSLNSESESGKSALNMPTPIKDWDTFEAEVNAGKIPDGNQYSCALCNLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYGSVEEDSRDSATANASATSDPGTNKNECDVCGKVFSNIANVKRHMRNIHRPGIVHVNCTDCSRVFKTKELRDRHVITEHKNKKATLQCPQCPKSFVFQANLNLHFKTAHSEKPQGGHKCDICGKAFIEEASLKIHRSWHSRVNSRLSIRFRVGEDQKPQIKPPIAPKEEQVFNTSSDRPARARKSFPNPPTSAAKPQGNFQCQVCNDKFNDVTELREHLWDVHCARNKAERSFMVNELQCEICTNVFPDKQTLAMHMQWHKAYPILSDIKNPSFPCDVCGKLYSSRKVLMRHKKLHKATSVAVAKCQSEATKPSQCLCNVCHKMFSSNQSLQRHKYNLHSEMFNRYRPQLMLNSSRRSSQEEPKAKKVKLEVEEDQKGPFNVKATGKKSVMCHVCRKFFPNMSVLYKHKQLTHNKSRVVKNIVKATLATNECVPLAGNEGKVCCNICYKEFPGLSNLRQHFTVKHKNAPLKYACPASGCKLTFPTPVALKNHEITHKSMICNCNLCGRHMFSRSAMTDHMLRSHNTIYDAEKSKNFHREADLAAYVVHGAVDATCPECKIKYPNNKSMKIHYFKFHENAGQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00089015;
90% Identity: iTF_00087373; iTF_00088246; iTF_00089015; iTF_00086571; iTF_00084736;
80% Identity: -