Basic Information

Insect: Andrena marginata
Gene Symbol: -
Assembly: GCA_963932335.1
Location: OZ010660.1:4741051-4745339[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.8 2.3e+02 2.8 7.7 2 23 243 265 242 265 0.96

2 20 0.03 2.4 9.0 4.9 1 23 315 337 315 337 0.98

3 20 0.21 17 6.4 2.1 1 23 386 408 386 408 0.98

4 20 0.031 2.5 9.0 0.3 1 20 462 481 462 483 0.93

5 20 0.00025 0.02 15.6 1.5 1 23 523 545 523 545 0.97

6 20 0.00085 0.07 13.9 0.1 1 23 593 615 593 615 0.97

7 20 0.00082 0.067 14.0 0.1 1 23 621 643 621 643 0.97

8 20 6.9e-07 5.6e-05 23.6 0.2 2 23 687 709 687 709 0.96

9 20 0.0031 0.25 12.1 0.5 3 23 718 739 716 739 0.95

10 20 2.4e-06 0.0002 21.9 0.5 1 23 746 769 746 769 0.98

11 20 6.7e-05 0.0055 17.4 0.3 1 23 777 799 777 799 0.96

12 20 0.13 11 7.0 0.2 1 20 879 898 879 898 0.96

13 20 0.00062 0.051 14.3 0.1 2 23 918 939 917 939 0.96

14 20 0.00067 0.055 14.2 0.7 1 23 953 975 953 975 0.97

15 20 0.00094 0.077 13.8 5.1 3 23 999 1020 997 1020 0.91

16 20 0.034 2.8 8.8 2.0 2 23 1072 1094 1071 1094 0.93

17 20 0.0055 0.45 11.3 1.5 3 23 1125 1146 1123 1146 0.92

18 20 0.001 0.086 13.6 0.0 1 23 1153 1177 1153 1177 0.97

19 20 0.71 59 4.7 4.2 2 23 1183 1205 1182 1205 0.94

20 20 0.012 0.95 10.3 0.9 2 23 1235 1257 1235 1257 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.8	2.3e+02	2.8	7.7	2	23	243	265	242	265	0.96
2	20	0.03	2.4	9.0	4.9	1	23	315	337	315	337	0.98
3	20	0.21	17	6.4	2.1	1	23	386	408	386	408	0.98
4	20	0.031	2.5	9.0	0.3	1	20	462	481	462	483	0.93
5	20	0.00025	0.02	15.6	1.5	1	23	523	545	523	545	0.97
6	20	0.00085	0.07	13.9	0.1	1	23	593	615	593	615	0.97
7	20	0.00082	0.067	14.0	0.1	1	23	621	643	621	643	0.97
8	20	6.9e-07	5.6e-05	23.6	0.2	2	23	687	709	687	709	0.96
9	20	0.0031	0.25	12.1	0.5	3	23	718	739	716	739	0.95
10	20	2.4e-06	0.0002	21.9	0.5	1	23	746	769	746	769	0.98
11	20	6.7e-05	0.0055	17.4	0.3	1	23	777	799	777	799	0.96
12	20	0.13	11	7.0	0.2	1	20	879	898	879	898	0.96
13	20	0.00062	0.051	14.3	0.1	2	23	918	939	917	939	0.96
14	20	0.00067	0.055	14.2	0.7	1	23	953	975	953	975	0.97
15	20	0.00094	0.077	13.8	5.1	3	23	999	1020	997	1020	0.91
16	20	0.034	2.8	8.8	2.0	2	23	1072	1094	1071	1094	0.93
17	20	0.0055	0.45	11.3	1.5	3	23	1125	1146	1123	1146	0.92
18	20	0.001	0.086	13.6	0.0	1	23	1153	1177	1153	1177	0.97
19	20	0.71	59	4.7	4.2	2	23	1183	1205	1182	1205	0.94
20	20	0.012	0.95	10.3	0.9	2	23	1235	1257	1235	1257	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCGGAACATGGAAAACGCGTGCAGGCTCTGCCTCTCCACCGACGAGGCCAAGTCGTCGGTGTTCGGGATGCAGGACTCCCCGGTATCGTTGGCGGCCAAGATCCAGGCCTGCCTGTCGATCCAGATTTTATCCACGGACAGATTATCCACACAGATATGTGCACAGTGTGTTAGGAATGTGAATCAGTGGCACAATTATAAGGAAGCTTGTTTGCGTTCCCAAGAAAAATTGCAGCACTGGTTGGAGAAGCATTTGCAGTCGAGTCCGatgGTTGTAACTATCAAGGACGAACCTGTGGATCTAGATTTCTGCGAGGATAATATTGAGGTTATTTCGGAAACTACCATTGAATCTGACTTGGAGTCGACTACTTTGGAGCACAGTGTGAACAATGTAGAAAGCGATATTGTCACTCATGTACTGACAGACGAGGAAACGGATGTACAGAAAGCTCAGCCAGTATTGACGAAAGATACGGATGTCTCTTTGAAGCCGGAGCCCCAAGACGAGTATGATACCGACTGTACCATAGAAATAGAGTCTGTTACTGGCAGCGAACTTGTACCGAATCCCCTCTCGAATAAGGAAGATAGGGTCATGGAGGCTGATTCTACGCAGAAGTCTAATACGTCTGGCTTGCCGAATAAGAAGAAGATCAGGCGTGGTCCGCACACACACTTCCGAGGGGCTCGCGTCTACAAGCAGAAGTGCGTGCACTGTCAGATACATCTGCACTCTAAGTACTCTTACACCAAGCACATGGAGAGATTCCACACGGAGAAGCCGAATGGCGATACTGGATCTGCGGAGCTTGAAGACGCCGAGGAGCTGGTGGAAGATGTGGAGGATGAATTGATGAGTATGGAGAAGGATGCTCCCCTGACGCAAGTACAGCAAAATATTATTAGCCAATTGAAAACGTTCTCTTGCCATTCCTGCAAGCAAACGTTCAACGATCGGAGAAGCACTCTCTCACACATCCGCCAGCACATGCCCGATCTGAGGCCGTACACGTGTATCGCGTGTTTGACGGAGTTCCCGGATAGATCGATGTACAAGTTGCATTGCGGGGCGTCCTTCGAGTGCGCGATGAAAATTGCGTTGGTGGTGCCGAATCACGGTGAGGAGAAGTACTTTACATGTAACATGTGCCTGCGTTCGATGCAGAACCGAAAGCAATTGCTTAGCCACCTATCGAAACACTCTGACAAACAGTACGAAGAACTAATCTCCCCGTCGCGTTCCCCCCCTAAATTAAAGCCAATAACCCCCCTTCCCTCTCCTAAGCGAGAAGTGAAGAAACCCCTGCCCGATGCTCCGATCATTCCCCGTCCTTACAAAAACGGCGATCCCGCGCACAATCACATCTGCGATCTGTGCGGCATGATATACAGATACAAGCCGAACATGTTCAAGCACAGAGATCTGTGCCAACGTCTGTTACCAGAGGTCCGTACCTCTTACAAGTGTGTCCACTGCGGCATGACCTACCTAGTGTTCAAAAAGTTCCATAATCATATCACCTTCGAGCACAAGAAGAGAGACTTCGCGTGCTCGGAGTGTAACGCCAAGTTCCGATCGCCCAGCGACTTCTTGACCCACCACGAGACGCATCGCTTTGCCCGCAATAAAAGACAGTCCCTAGACTCGCAAAGCGAATCGGGGAAACAGGGGCTGGGCATGCCGACCCCTATCAAAGACTGGGACACGTTCGAGGCGGAGGTGAACGCGGGAAAGATACCGGACGGTAATCAGTACAGTTGCGCCCTGTGCAACCTGGAATTTGCCACGAGGGCAGAACTGACGGAGCACAGGAACCTTCACCTCAAAGTGAAGATCTATTCCTGCGTGATTTGTCGCAGCATGTTTAGCAGCGCGGGTGCCCTGGAGATCCACATGAAGGATCACGGTATAGAGGATCCAAACGAGCGAAACGCGAATAGCTCGTGCGTGGAATACGGCAGCGTGGAGGAAGATTCGCGTGATTCAGCCACGGCGAACACCAGCGCGACCTCCGACCCCGGCACGATCAAGAACGAGTGCGACGTGTGCGGCAAGGTATTCTCGAATCTCGCGAACGTCAAGAGACACATGAGGAACATCCATCAGCCGGGCATCGTCCACGTCAACTGCACCGACTGTTCGCGCGTGTTCAAGACCAAGGAGTTACGCGACCGGCACGTGATAACCGAGCACAAGAACAAGAAAGCGATGTTCCAGTGTCCCCAATGCCCAAAGAGCTTCGTGTTCCAAGCGAATCTGAACCTGCACTTCAAGACCGCGCACAGCGAGAAGCCGCAGGGCGGTCACAAATGCGACATATGCGGGAAGGCGTTCATCGAGGAAGCGTCTCTAAAGATACACAGGAGCTGGCACAGCAGAGTGAACTCGCGGTTGAGCATACGATTCAAAGTGGGCGAGGATCAGAAGTCGCAGATCAAGCCGCAGATCAAGCCGCAGATCAAGCCTCAGATCAAGCCGCCGATCAAGCCGCCGATCAAGCCGCCGATCGTGCCCAAAGAGGAGCAGGAGTTCAACACCAGCTCCGATCGGCCAGCAAGAGCGCGGAAATCGTTCCCGAACCCGCCGACCTCCGCGAAGCCGCAGGGCAACTTCCAGTGTCAAGTTTGCAACGACAAGTTCAACGACGTGACAGAGCTGAGGGAACACTTGTGGGACGTGCACTGCGCCCGCAACAAGGCCGAGAGGAATTTCATGGTGAACGAGCTGCAGTGCGAGATCTGCACGAACGTTTTCCCCGACAAACAGACGCTGGCCATGCACATGCAGTGGCACAAGGCCTACCCCATCCTCAGCGACATAAAGAACCCGAGCTTCCCGTGCGACGTTTGCGGGAAACTGTACAGCTCGAGAAAGGTGCTGATGAGACACAAGAAGCTCCACAAAGCCACTAGCGCGGCCGCCGCCAAGTGCCAATCGGAGGCCGCGAAGCCCTCGCCCAGCCAGTGCCTGTGCAACGTCTGCCACAAGGTGTTCAGCAGCAACCAGTCGCTGCAACGTCACAAGTACAACTTGCACAGCGAGATGTTCAATCGGTACCGCCCGCAGCTAATGCTCAATAGCTCGCGAAGATCGTCCCAGGAGGAGCCGAAGGCGAAGAAGGTGAAgctggaggtggaggaggaccAGAAGGTACCGTTCAATGTGAAGGCTACCGGCAAGAAGTCGGTGATGTGCCACGTCTGCAGAAAGTTCTTCCCGAACATGAGCGTGCTGTACAAGCATAAACAGCTCACGCACAATAAGTCCCGGGTGGTGAAGAACATCGTGAAGGCGACGATAGCCACCAACGAATGCGTCCCGCTGGCTGGTAACGAGGGCAAGGTCTGCTGCAACATCTGCTACAAGGAGTTCCCCGGCCTATCGAATCTTCGCCAGCACTTCACCGTGAAACACAAGAACGCCCCGCTCAAGTACGCCTGCCCGGCGACTGGCTGCAAGCTCACGTTCCCCACCCCCGTCGCTTTGAAGAATCACGAGATCACGCATAAAAGCATGATCTGCAATTGCAACCTGTGCGGCCGGCACATGTTCAGCAGATCAGCGATGACGGATCACATGCTCAGGTCCCACAACACTATCTACGACGCGGAGAAGAGCAATAACTTCCACAGGGAGGCGGACTTGGCCGCGTACGTGGTGCACGGCGCTGTGGACGCCACCTGCCCCGAGTGCAACATCAAGTACCCCAACAACAAATCCATGAAGATCCACTACTTCAAGTTCCACGAGAACGCCGGCCAGATATAG
Protein Sequence: MDEVVELRNMENACRLCLSTDEAKSSVFGMQDSPVSLAAKIQACLSIQILSTDRLSTQICAQCVRNVNQWHNYKEACLRSQEKLQHWLEKHLQSSPMVVTIKDEPVDLDFCEDNIEVISETTIESDLESTTLEHSVNNVESDIVTHVLTDEETDVQKAQPVLTKDTDVSLKPEPQDEYDTDCTIEIESVTGSELVPNPLSNKEDRVMEADSTQKSNTSGLPNKKKIRRGPHTHFRGARVYKQKCVHCQIHLHSKYSYTKHMERFHTEKPNGDTGSAELEDAEELVEDVEDELMSMEKDAPLTQVQQNIISQLKTFSCHSCKQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPNHGEEKYFTCNMCLRSMQNRKQLLSHLSKHSDKQYEELISPSRSPPKLKPITPLPSPKREVKKPLPDAPIIPRPYKNGDPAHNHICDLCGMIYRYKPNMFKHRDLCQRLLPEVRTSYKCVHCGMTYLVFKKFHNHITFEHKKRDFACSECNAKFRSPSDFLTHHETHRFARNKRQSLDSQSESGKQGLGMPTPIKDWDTFEAEVNAGKIPDGNQYSCALCNLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYGSVEEDSRDSATANTSATSDPGTIKNECDVCGKVFSNLANVKRHMRNIHQPGIVHVNCTDCSRVFKTKELRDRHVITEHKNKKAMFQCPQCPKSFVFQANLNLHFKTAHSEKPQGGHKCDICGKAFIEEASLKIHRSWHSRVNSRLSIRFKVGEDQKSQIKPQIKPQIKPQIKPPIKPPIKPPIVPKEEQEFNTSSDRPARARKSFPNPPTSAKPQGNFQCQVCNDKFNDVTELREHLWDVHCARNKAERNFMVNELQCEICTNVFPDKQTLAMHMQWHKAYPILSDIKNPSFPCDVCGKLYSSRKVLMRHKKLHKATSAAAAKCQSEAAKPSPSQCLCNVCHKVFSSNQSLQRHKYNLHSEMFNRYRPQLMLNSSRRSSQEEPKAKKVKLEVEEDQKVPFNVKATGKKSVMCHVCRKFFPNMSVLYKHKQLTHNKSRVVKNIVKATIATNECVPLAGNEGKVCCNICYKEFPGLSNLRQHFTVKHKNAPLKYACPATGCKLTFPTPVALKNHEITHKSMICNCNLCGRHMFSRSAMTDHMLRSHNTIYDAEKSNNFHREADLAAYVVHGAVDATCPECNIKYPNNKSMKIHYFKFHENAGQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00089015;
90% Identity: iTF_00085617;
80% Identity: -