Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482667.1:33810972-33815227[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.7 2.3e+02 2.8 7.7 2 23 243 265 242 265 0.96

2 20 0.029 2.4 9.1 4.9 1 23 315 337 315 337 0.98

3 20 0.2 17 6.4 2.1 1 23 386 408 386 408 0.98

4 20 0.03 2.5 9.0 0.3 1 20 462 481 462 483 0.93

5 20 0.00024 0.02 15.6 1.5 1 23 523 545 523 545 0.97

6 20 0.00083 0.07 13.9 0.1 1 23 593 615 593 615 0.97

7 20 0.0008 0.067 14.0 0.1 1 23 621 643 621 643 0.97

8 20 2.1e-06 0.00017 22.1 0.2 2 23 687 709 687 709 0.96

9 20 0.003 0.25 12.2 0.5 3 23 718 739 716 739 0.95

10 20 9.2e-06 0.00077 20.1 0.3 2 23 747 769 746 769 0.96

11 20 6.5e-05 0.0054 17.4 0.3 1 23 777 799 777 799 0.96

12 20 0.13 11 7.0 0.2 1 20 871 890 871 890 0.96

13 20 0.0006 0.05 14.3 0.1 2 23 910 931 909 931 0.96

14 20 0.00036 0.03 15.0 0.7 1 23 945 967 945 967 0.97

15 20 0.00091 0.077 13.8 5.1 3 23 991 1012 989 1012 0.91

16 20 0.033 2.8 8.9 2.0 2 23 1064 1086 1063 1086 0.93

17 20 0.0054 0.45 11.4 1.5 3 23 1117 1138 1115 1138 0.92

18 20 0.001 0.085 13.6 0.0 1 23 1145 1169 1145 1169 0.97

19 20 0.7 58 4.7 4.2 2 23 1175 1197 1174 1197 0.94

20 20 0.011 0.94 10.3 0.9 2 23 1227 1249 1227 1249 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.7	2.3e+02	2.8	7.7	2	23	243	265	242	265	0.96
2	20	0.029	2.4	9.1	4.9	1	23	315	337	315	337	0.98
3	20	0.2	17	6.4	2.1	1	23	386	408	386	408	0.98
4	20	0.03	2.5	9.0	0.3	1	20	462	481	462	483	0.93
5	20	0.00024	0.02	15.6	1.5	1	23	523	545	523	545	0.97
6	20	0.00083	0.07	13.9	0.1	1	23	593	615	593	615	0.97
7	20	0.0008	0.067	14.0	0.1	1	23	621	643	621	643	0.97
8	20	2.1e-06	0.00017	22.1	0.2	2	23	687	709	687	709	0.96
9	20	0.003	0.25	12.2	0.5	3	23	718	739	716	739	0.95
10	20	9.2e-06	0.00077	20.1	0.3	2	23	747	769	746	769	0.96
11	20	6.5e-05	0.0054	17.4	0.3	1	23	777	799	777	799	0.96
12	20	0.13	11	7.0	0.2	1	20	871	890	871	890	0.96
13	20	0.0006	0.05	14.3	0.1	2	23	910	931	909	931	0.96
14	20	0.00036	0.03	15.0	0.7	1	23	945	967	945	967	0.97
15	20	0.00091	0.077	13.8	5.1	3	23	991	1012	989	1012	0.91
16	20	0.033	2.8	8.9	2.0	2	23	1064	1086	1063	1086	0.93
17	20	0.0054	0.45	11.4	1.5	3	23	1117	1138	1115	1138	0.92
18	20	0.001	0.085	13.6	0.0	1	23	1145	1169	1145	1169	0.97
19	20	0.7	58	4.7	4.2	2	23	1175	1197	1174	1197	0.94
20	20	0.011	0.94	10.3	0.9	2	23	1227	1249	1227	1249	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGTGGAGTTGCGGAACATGGAAAACGCGTGCAGGCTCTGCCTCTCCACCGACGAGGCCAAGTCGTCGGTGTTCGGGATGCAGGACTCCCCGGTATCGTTGGCGGCCAAGATTCAAGCCTGCCTGTCGATCCAGATTTTATCCACGGACAGATTATCGACACAGATATGTGCGCAGTGTGTTAAGAATGTGAATCAGTGGCACAATTATAAGGAAGCTTGTTTGCGTTCCCAAGAAAAATTGCAGCAGTGGTTGGAGAAGCATCTGCAGTCGAGTCCGATGGTTGTAACTATCAAGGACGAACCTGTGGATCTAGATTTCTGCGAAGATAATATTGAGGTTATTTCGGAAACTACTATCGAATCGGACGTGGAGTCGAACACTCTAGAGCACAGTGTAAACAATGTAGAAAGCGATATTCTCACTCATGTACTGACAGACGAGGAAGCGGACGTACAGAAAGCTCAGCCAGTATTGACGAAAGATACGGATGTCCCTTTGAAGCTGGAGCCCCAAGACGAGTATGATACCGACTGTACCATAGAAATAGAGTCTGTTACTGGCAGCGAACTTGTACCGAATCCCCTCTCGAATAAAGAAGATAGGGTGATGGAGGCCGATTCTACGCAGAAGTCTAATATGTCTGGCTCGCCGAATAAAAAGAAGCTGAGGCGGGGTCCACACACACACTTCCGAGGGGCTCGTGTCTACAAGCAGAAGTGCGTGCACTGTCAAATACATCTGCACTCGAAGTACTCTTACACCAAGCACATGGAGAGATTCCACACGGAGAAGCCAAATGGCGATGCTGGATCTGCGGAGCTGGAAGACGCCGAGGAGCTGGTGGAAGATGTGGAGGATGAGTTGATGAGTATGGAGAAGGATGCTCCCCTGACGCAAGTACAGCAAAATATTATTAGCCAATTGAAAACGTTCTCTTGCCATTCCTGCAAgcaaacgttcaacgatcggaGAAGCACTCTCTCCCACATCCGCCAGCACATGCCCGATCTGAGGCCGTACACGTGTATCGCGTGTTTGACGGAGTTCCCGGATCGATCGATGTACAAGTTGCACTGCGGGGCGTCCTTCGAGTGCGCGATGAAAATTGCGTTGGTCGTGCCGAATCACGGTGAGGAGAAGTACTTTACATGTAACATGTGCCTGCGTTCTATGCAGAACCGAAAGCAATTGCTTAGCCACCTATCGAAACACTCTGACAAACAGTACGAAGAACTAATCTCCCCGTCGCGTTCCCCCCCTAAATTAAAGCCAATAACCCCCCTTCCCTCTCCTAAGCGAGAAGTGAAAAAACCTCTGCCCGATGCCCCGATCATACCCCGTCCTTACAAAAACGGCGATCCCGCGCACAATCACATCTGCGATCTGTGCGGCATGATATACAGATACAAGCCGAACATGTTCAAGCACAGAGATCTGTGCCAACGTCTGTTACCGGAGGTCCGTACCTCTTACAAGTGTGTCCACTGCGGCATGACCTACCTAGTGTTCAAAAAGTTCCATAATCATATCACCTTCGAGCACAAGAAGAGAGACTTCGCGTGCTCGGAGTGTAACGCCAAGTTCAGATCGCCCAGCGACTTCTTGACCCACCACGAGACGCATCGCTTTGCCCGCAATAAAAGACAGTCCCTGGACTCGCAAAGCGAATCGGGGAAACAGGCGCTGAACATGACGAGCCCTATCAAAGACTGGGACACGTTCGAGGCGGAGGTGAACGCGGGAAAGATACCGGACGGTAATCAGTACAGTTGCGCCCTGTGCAACCTGGAATTTGCCACCAGGGCAGAACTGACGGAGCACAGGAACCTCCACCTGAAGGTGAAGATCTATTCCTGCGTCATTTGTCGCAGCATGTTTAGCAGCGCGGGTGCCCTGGAGATCCACATGAAGGATCACGGTATAGAGGATCCGAACGAGCGAAACGCGAATAGCTCGTGCGTGGAATACGGCAGCGTGGAGGAAGATTCGCGCGATTCAGCCGCGGCGAACGCCAGCGCGACCTCCGACCCCGGTACGAACAAGAACGAGTGCGACGTGTGCGGCAAGGTCTTCTCGAACATCGCGAACGTCAAGAGACACATGAGGAACATCCACCAGCCGGGCATCGTCCACGTCAACTGCACCGACTGTTCGCGCGTGTTCAAGACCAAGGAGTTACGCGACCGGCACGTGATAACCGAGCACAAGAACAAGAAGCCGATGCTCCAGTGTCCCCAGTGCCCAAAGAGCTTCGTGTTCCAAGCGAATCTGAACCTGCACTTCAAGACCGCGCACAGCGAGAAGCCGCAAGGCGGTCACAAATGCGACATCTGCGGAAAGGCCTTCATCGAGGAAGCGTCTCTGAAGATACACAGGAGCTGGCACAGCAGAGTGAACTCGCGGTTGAGCATACGATTCAAAGTGGGCGAGGATCGGAAGCCGCAGGTCAAGCCTCAGATCAAACCGCCGACCAAGCCACCGATCAAGCCGCCGATCGTGCCCAAAGAGGAGCAGGAGTTCAACACCAGCTCCGATCGGCCAGCAAGAGCGCGGAAGTCGTTCCCGAACCCGCCGACCTCTGCGAAGCCGCAGGGCAACTTTCAGTGTCAAGTTTGCAACGACAAGTTCAACGACGTGACGGAGCTGAGGGAACACCTGTGGGACGTGCACTGCGCCCGCAACAAGGCCGAGAGGAATTTCATGGTGAACGAGCTGCAGTGCGAGATCTGCACGAACGTCTTCCCCGACAAACAGACGCTGGCCATGCACATGCAGTGGCACAAGGCCTACCCCATCCTCAGCGACATCAAGAACCCGAGCTTCCCGTGCGACATCTGCGGGAAACTGTACAGCTCGAGAAAGGTGCTGATGAGACACAAGAAGCTCCACAAAGCCACCAGCGCGGCCGCCGCCAAGTGCCAATCGGAGGCCACGAAAGGCTCGCCTAGCCAGTGCCTGTGCAACGTCTGCCACAAGGTGTTCAGCAGCAACCAGTCGCTGCAACGTCACAAGTACAACTTGCACAGCGAGATGTTCAATCGGTACCGCCCGCCGCTAATGCTGAATAGCTCGCGAAGATCGTCCCAGGAGGAGCCGAAGGCCAAGAAGGTGAAGCTTGAGGTGGAGGAGGAGCAGAAGGAACCGTTCAACGTGAAGGCCACCGGCAAGAAGTCGGTGATGTGCCACGTCTGCCGAAAGTTCTTCCCGAACATGAGCGTGCTGTACAAGCACAAGCAGCTCACGCACAACAAGTCCCGCGTGGTGAAGAACATCGTGAAGGCGACGATAGCCACCAACGAGTGCGTCCCGCTGGCTGGTAACGAGGGCAAGGTCTGCTGCAACATCTGCTACAAGGAGTTCCCCGGCCTCTCGAATCTTCGCCAGCACTTCACCGTGAAACACAAGAACGTCCCGCTCAAGTACGCCTGCCCGGCGACCGGCTGCAAGCTCACGTTCCCCACCCCGGTGGCTTTAAAGAATCACGAGATCACGCATAAAAGCATGATCTGCAATTGCAACCTGTGCGGCCGGCACATGTTCAGCAGATCAGCGATGACGGATCACATGCTCAGGTCCCACAACACTATCTACGACGCGGAGAAGAGCAAAAACTTCCACAGGGAGGCGGACCTGGCCGCGTACGTGGTGCACGGCGCCGTGGACGCAACCTGCCCCGAGTGCAACATCAAGTATCCCAACAACAAATCCATGAAGATCCACTACTTCAAGTTCCACGAGAACGCCGGCCAGATATAG
Protein Sequence: MDEVVELRNMENACRLCLSTDEAKSSVFGMQDSPVSLAAKIQACLSIQILSTDRLSTQICAQCVKNVNQWHNYKEACLRSQEKLQQWLEKHLQSSPMVVTIKDEPVDLDFCEDNIEVISETTIESDVESNTLEHSVNNVESDILTHVLTDEEADVQKAQPVLTKDTDVPLKLEPQDEYDTDCTIEIESVTGSELVPNPLSNKEDRVMEADSTQKSNMSGSPNKKKLRRGPHTHFRGARVYKQKCVHCQIHLHSKYSYTKHMERFHTEKPNGDAGSAELEDAEELVEDVEDELMSMEKDAPLTQVQQNIISQLKTFSCHSCKQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPNHGEEKYFTCNMCLRSMQNRKQLLSHLSKHSDKQYEELISPSRSPPKLKPITPLPSPKREVKKPLPDAPIIPRPYKNGDPAHNHICDLCGMIYRYKPNMFKHRDLCQRLLPEVRTSYKCVHCGMTYLVFKKFHNHITFEHKKRDFACSECNAKFRSPSDFLTHHETHRFARNKRQSLDSQSESGKQALNMTSPIKDWDTFEAEVNAGKIPDGNQYSCALCNLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYGSVEEDSRDSAAANASATSDPGTNKNECDVCGKVFSNIANVKRHMRNIHQPGIVHVNCTDCSRVFKTKELRDRHVITEHKNKKPMLQCPQCPKSFVFQANLNLHFKTAHSEKPQGGHKCDICGKAFIEEASLKIHRSWHSRVNSRLSIRFKVGEDRKPQVKPQIKPPTKPPIKPPIVPKEEQEFNTSSDRPARARKSFPNPPTSAKPQGNFQCQVCNDKFNDVTELREHLWDVHCARNKAERNFMVNELQCEICTNVFPDKQTLAMHMQWHKAYPILSDIKNPSFPCDICGKLYSSRKVLMRHKKLHKATSAAAAKCQSEATKGSPSQCLCNVCHKVFSSNQSLQRHKYNLHSEMFNRYRPPLMLNSSRRSSQEEPKAKKVKLEVEEEQKEPFNVKATGKKSVMCHVCRKFFPNMSVLYKHKQLTHNKSRVVKNIVKATIATNECVPLAGNEGKVCCNICYKEFPGLSNLRQHFTVKHKNVPLKYACPATGCKLTFPTPVALKNHEITHKSMICNCNLCGRHMFSRSAMTDHMLRSHNTIYDAEKSKNFHREADLAAYVVHGAVDATCPECNIKYPNNKSMKIHYFKFHENAGQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00089015;
90% Identity: iTF_00085617;
80% Identity: -