Alep009367.2
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- bab1
- Assembly
- GCA_963942555.1
- Location
- OZ012612.1:18531375-18549907[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 2.2e-14 53.7 0.0 1 43 75 118 75 120 0.95 2 2 9.2 1e+04 -2.9 2.3 6 15 194 203 192 204 0.88
Sequence Information
- Coding Sequence
- ATGCCACTTGTAATAATAAACACGATGAGTATTTATAACAAGCCCATTGAAAAAGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGACAGCTATCAGTATCAACTTCAATCACTTTGGCAAAAATGTTGGAATACGAATTCTGGACTTGTTCATAATCTGCGCTTTCGTGAACGTGGACCATTGAAATCATGGAGGCCTGAGACTATGGCTGAGGCGATTTTCAGTGTACTCAAAGAGGGATTGTCATTGAGTCAAGCAGCAAGAAAATATGATATTCCATATCCAACATTCGTTCTGTACGCGAATCGTGTACACAACATGCTTGGACCCAGCTCCGATGGCGGAGCCGATTTACGGCCAAAAGGACGAGGAAGGCCCCAGAGGATTCTACTTGGTGTATGGCCTGACGAGCATATCCGTGGTGTTATCAGAGCCGTTGTATTCCGTGACGGTTCTATCGTCAAGGACGAGCCAAATCCAATGTATCCAAGCCTAGCGAATTACGCGTGCAATGGGCCAGAAGGGGCGGTGAGCCCTGGTGCCGCTGCGGCTGCTGCGGTTGCAGCGGTCGCCCAAGGACTTCGACATCAAATGTGCAACATGGTAGCAGCAGCCCAGTCCCATCAACACGACATGATAGCTACAAACTTATCAGCGAACTTCCAAGCGGCCGTTCAAGTTAGCCAACATCACTTAAACAATAACAGTGGCTcaagcaacaacaacaacacaAATAATAATCGTAATTCCCCATTGATCCTTGGACTACCAAGTCCTGGATCGGGTGGACCACCAGAGAGTCCAATGGAGGGTAGTCCACTTGCTAGTCCATTAGCACCACTTATGGATCCAGCACACATACCAAGCAGTGTTGAAGTTGGTATTGGTGTCAGTGGTATGACATACAAGCCACAACGTAGCTATGTAAGTCCTAGGccagaaaatttatttcaagagGACATTGCCGATCTTGTTAAGAGTTCACATGGACACAAGGATAAGGACAAAGTGCCAGTTAAAATTGAACCATTGACTGATTCAAGGAGCGAgcagtaa
- Protein Sequence
- MPLVIINTMSIYNKPIEKAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCNMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSGSSNNNNTNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPQRSYVSPRPENLFQEDIADLVKSSHGHKDKDKVPVKIEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_00905338;
- 80% Identity
- iTF_00046051; iTF_00047884;