Aalt022126.2
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- bab1
- Assembly
- GCA_963921955.1
- Location
- OY998112.1:5541509-5553887[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 1.8e-14 53.8 0.0 1 43 62 105 62 107 0.95 2 2 5.8 5.7e+03 -2.2 1.8 6 15 181 190 179 192 0.88
Sequence Information
- Coding Sequence
- ATGAGCCAACTTTGCGCCAAGTTGTTGGAGTCTTCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGACAGCTACCAGTATCAACTTCAATCACTTTGGCAAAAATGTTGGAATACTAATTCTGGACTTGTTCATAATCTGCGCTTTCGTGAACGTGGACCATTGAAATCATGGAGGCCTGAGACTATGGCTGAGGCGATTTTCAGTGTACTCAAAGAGGGATTGTCATTGAGTCAAGCAGCaagAAAATATGATATTCCATATCCAACATTCGTTCTGTACGCGAATCGTGTACACAACATGCTTGGACCCAGCTCCGATGGCGGAGCCGATTTACGGCCAAAAGGACGAGGAAGGCCCCAGAGGATTCTACTTGGTGTATGGCCTGACGAGCACATCCGTGGTGTTATCAGAGCCGTTGTATTCCGTGACGGTTCTATCGTCAAGGACGAGCCAAATCCAATGTATCCAAGCCTAGCGAATTACGCGTGCAATGGGCCAGAAGGGGCGGTGAGCCCTGGTGCCGCTGCGGCTGCTGCGGTTGCAGCGGTCGCCCAAGGACTCCGACATCAAATGTGCAACATGGTAGCAGCAGCCCAGTCCCATCAACACGACATGATAGCTACAAATTTATCAGCGAACTTCCAAGCGGCCGTTCAAGTTAGCCAACATCACTTAAACAATAACAGTGGCTCAAGCAACAACAACAATACAAATAATAATCGCAATTCACCTTTGATCCTTGGACTACCAAGTCCTGGCTCGGGTGGACCACCAGAGAGCCCAATGGAGGGTAGTCCATTGGCTAGTCCACTAGCACCACTTATGGATCCAGCACACATACCAAGCAGCGTTGAAGTTGGTATTGGTGTCAGTGGTATGACATACAAGCCACAACGTAGCTATGTAAGTCCTAGGccagaaaatttatttcaagagGACATTGCTGATCTTGTTAAGAGTTCACATGGACACAAGGATAAGGACAAAGTGCCAGTTAAAATTGAACCATTGACTGATTCAAGGAGCGAGCAGTaa
- Protein Sequence
- MSQLCAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCNMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSGSSNNNNTNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPQRSYVSPRPENLFQEDIADLVKSSHGHKDKDKVPVKIEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_00905338;
- 80% Identity
- iTF_00046876;