Ates016439.2
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- bab1
- Assembly
- GCA_963565655.1
- Location
- OY751428.1:3041694-3047908[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-18 1.3e-14 53.7 0.0 1 43 74 117 74 119 0.95 2 2 3.5 6.2e+03 -2.9 2.3 6 15 193 202 191 203 0.88
Sequence Information
- Coding Sequence
- ATGCCTCCACATATTAGGAAAGTTGTTTCCCTTTTCTGGTGCTTGTTTATGgcCAAGTTGTTGGAGTCTTCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGACAGCTACCAGTATCAACTGCAATCGCTCTGGCAAAAGTGTTGGAACACTAATTCTGGACTTGTTCATAATCTGCGCTTTCGTGAACGTGGACCATTGAAGTCATGGAGGCCTGAGACTATGGCTGAGGCGATTTTTAGTGTACTCAAGGAGGGATTGTCATTAAGTCAAGCAGCAAGAAAATATGATATTCCATATCCAACATTCGTTCTGTATGCGAATCGTGTACACAACATGCTTGGACCCAGCTCCGATGGCGGAGCCGATTTACGGCCAAAAGGACGAGGAAGACCCCAGAGGATTCTACTTGGTGTATGGCCTGACGAGCACATCCGTGGTGTTATCAGAGCCGTTGTATTCCGTGACGGTTCCATCGTCAAGGACGAGCCAAATCCAATGTATCCAAGCCTAGCGAATTACGCGTGCAATGGGCCAGAAGGGGCGGTGAGCCCTGGTGCCGCTGCGGCTGCTGCGGTTGCAGCGGTCGCCCAAGGTCTTCGGCATCAAATGTGCAACATGGTAGCAGCAGCCCAGTCGCATCAGCACGACATGATAGCTACAAACTTATCAGCGAACTTCCAAGCGGCCGTTCAAGTTAGCCAACATCACTTAAACAATAACAGTGGCTCaagcaacaacaacaacacaAATAATAATCGCAATTCACCTCTGATCCTCGGTCTGCCGAGTCCTGGCTCGGGTGGACCACCAGAGAGTCCAATGGAGGGCAGTCCTCTAGCTAGTCCACTAGCACCACTGATGGATCCAGCGCACATACCAAGCAGCGTTGAAGTTGGAATTGGCGTGAGTGGTATGACATACAAGCCGCAACGTAGCTACGTAAGTCCTAGACcagagaatttatttcaagagGACATTGCCGATCTTGTGAAGAGTTCTCATGGACACAAGGACAAGGACAAAGTGCCAGTTAAGATTGAACCATTGACTGATTCAAGGAGCGAGCAGTaa
- Protein Sequence
- MPPHIRKVVSLFWCLFMAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCNMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSGSSNNNNTNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPQRSYVSPRPENLFQEDIADLVKSSHGHKDKDKVPVKIEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_00378657;
- 80% Identity
- iTF_00046876;