Aexc016972.1
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_950005045.1
- Location
- OX465423.1:2770238-2779424[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-80 6.1e-76 257.1 26.5 1 297 26 315 26 317 0.89 2 2 0.64 3.4e+04 -4.7 16.4 1 49 314 361 314 389 0.71
Sequence Information
- Coding Sequence
- ATGGACATGAATCTCCCAAATCTTGTCCGCTGGGGACATACCCATGACTCAACGTGTGAAGGACCAGATTTACAAGCAGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCGGAGGCGCGGGAGATACGTATGCGGGAGCTGGAGAGGCAGCAGCGAGAACAGGAGGACCATGCCGACAAGGCGTACGATATGTATGCGGGAAAGACACCAGAGACGGTGGGACGCCGCGGCGCTACGAGGCTGACGGCGCTCAGCCCGGCCGTGCACTCTCCCAGGCGAAGCTCTGAAGACTCCATCGATGATGGCTTCAGCATCAAAGACCTAAGACACGAGTTAAAGGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTTGATAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACCGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAAAGAAAAATGCTCATCATTCGAGCGTTTAAAGCGCGAGCACGAGTCTGTGTCCCGCGAGCTGAGCGCAGCTCGGGACGCAGTACGTGCGCGGGACGCGGCCGCCGCCAGCGCGGGCTTCGCCTTCGTGGACGCGGCCGCCCTGGAGCCCGGACAGCGGGACTCCGCCGGGGCCGCCGTGGGGGAGGTGCCCGAGCTGGCGCTCGTCACTCACCAGGCGGAGCAGCTGCTTAATGATGCGGGAGAGGGGACTCTTGACGTGCGGTTGCAAAAGCTGCTGAGTTCGAAGCAGGCGCTGGAGTCAGAGGTGCGCAAACTGAAGCTGCAGCTGAACGAGGAGCGAGCCGCACGTCAGAACGGAGTCACCAACCATCACGACCAGGAGTACGAGAATGAACTGGAGACAGTCCGCAAGGCGGTGTCGGAGGCGAAGGGCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTCGGGGCGGCGCACGTCGCGCGGCTGGAGGCACAGCTGGCGAGGCTCAGGGCGCGGCAGGAGCACCAGGATGAACATGAGGAACAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCTCGGGAAGCACTGAACCGGGTTGAGGAGTTGGAAACAGAAAACAGTCACCTCACGAAACGACTGGACAAGCTCAAGAACGCGAAGTCGGCTCTCCTCAAAGACCTGTGA
- Protein Sequence
- MDMNLPNLVRWGHTHDSTCEGPDLQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSIDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVSRELSAARDAVRARDAAAASAGFAFVDAAALEPGQRDSAGAAVGEVPELALVTHQAEQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALGAAHVARLEAQLARLRARQEHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041796;
- 90% Identity
- iTF_01362447; iTF_00071452;
- 80% Identity
- -