Sfru021714.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- lrrfip2
- Assembly
- GCA_011064685.1
- Location
- JANIPB010002199.1:337751-341989[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-79 1.8e-75 254.4 25.0 1 297 8 302 8 304 0.91 2 2 3 2.3e+04 -5.5 17.2 1 49 301 348 301 374 0.73
Sequence Information
- Coding Sequence
- atgttgcgccaaaatgtgttaGCGGAACAAAGGTTGGCAGCGCGGCGGGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGCGCCAGCAGCGCGAACAGGAGGACCATGCTGACAAAGCATATGATATGTATGCCGGCAAGACACCAGAGTCAGTGGGTCGCCGCGGTGGCACGCGACTGGCGTCCCTCAGCCCGGCCGTGCACTCGCCTCGCCGCAGCTCCGAAGACTCCATGGATGACGCGTTCAGCGTCAAAGATCTTAGGCACGAGTTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTACAGCGAGAGCACAGAGAGAAATGCTCATCATTCGAGCGTTTGAAGCGGGAGCACGAGTCAGTGACTCGCGAGCTGAGCGCGGCGCGGGACGCGGTGCGGGCGCGGGACGCGGCGGCCGCGGCCGCGGGCTTCGCCTTCGTGGACGCCGCGTCGCTGGACGCCGCCGCCCGGGACGCCGCGGGCGCCGCCCCCGCCGGGGCCGCCGTGGGCGCCGTGCCCGCGCTGGCGCTGCTCACACAGGCCGCGCATCAACTCCTCGACACCGCCGGCGAGGGCACGCTCGACGTACGGTTGCAGAAGCTGCTGAGCTCTAAGCAGGCGCTGGAGTCCGAGGTTCGCAAACTGAAGCTACAGCTGAACGAGGAGCGTGCCGCCAGGCAGAATGGTGTCACCAACCACCACGACCAGGAGTACGAGAATGAACTGGAGACAGTGCGCAAGGCGGTGTCGGAGGCGAAGGGGCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCCGCCCATGTCGCGCGGCTCGAGGCGCAGCTGGCGCGGCTGCGGGCAAGGCAGGACCACCAGGACGAACACGAGGAACAACTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCTCGAGAAGCGCTCAACCGGGTTGAGGAGTTGGAGACTGAGAACAGCCACCTGACGAAGCGACTCGACAAACTCAAGAACGCGAAGTCTGCTCTGCTGAAAGACCTGTGA
- Protein Sequence
- MLRQNVLAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPESVGRRGGTRLASLSPAVHSPRRSSEDSMDDAFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAAAGFAFVDAASLDAAARDAAGAAPAGAAVGAVPALALLTQAAHQLLDTAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041796;
- 90% Identity
- iTF_00040839;
- 80% Identity
- -