Alot018194.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- -
- Assembly
- GCA_947364205.1
- Location
- OX376219.1:17859690-17865278[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 6.1e-07 29.5 0.0 1 42 18 59 18 62 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGCAAATATATTAGAAAGGTTGGAGTTCGTCCACGAGCTGAATGGACGCAAGAGGCATTAATAGCTGCAATAGACGAAATTTCGAGAGGCATTCTAGGAATTAACGAAATATCTCGTAGATATGGGATTCCCTCAAGAACATTGAGGCGAAGATTCGCTAACAAAAATACGGAAAAACTGACATTAGGAAAACACCCACTTCTTGATTTTGTAAACGAAAAACGTTTGGTGAGTCATATACAGAAATTAGAAAAAGCTGGTTTCCCTCCAACCCGGGACATGATTCGAAGATTAGCTTTCGAGTTTGCTGAAAAACTGGGTAAAGAAACCCATTTTGATAAAGAGACTCGAAAGGCTGGGCCGCATTGGTTAACATCATTTTTAGAACGTAATAAAGAGTTAAGTATTCGTCAGGCAGAAGGCTTATCAGTTGCAAAGGGATTAAATCGAGATGAAGTTAACAAAATGTTTGAACTACTGCTTAAAGTAATGACAGAGCATGACTTACTGGATAAACCGGATAGGATTTACAATGTAGATGAGACAGGTGTCCAGTTAAATAACTCTACTGGAAAAGTCATAGCTACAAGAGGCGCAAGAGTAGTCCATTCTATAACTTCTGGTGAAAAAGGTGAAACTTTATCAGTAATAGCATGCTGCAATGCTGTGGGGAACTTTCTTCCCCCAGTAGTCATCATTAAAGGAGTAAACAAGAAACCAGAATTTCAGGATGGGCTCCCACCTGGATCAGAAGTCTATATGAATAGAAAATCCGCGTACGTGAATGCTGAATTATTTCACAAGTGGCTGAAAGAACATCTTGTACCTAAAAAACCAATAGGAAAGATTATTTTGATTCTGGATGGTTATTCATCTCACACGAATGCTATAGATATGCTTCAAACTGCCGAAGAAAATGATATAATTTTATTTTGCCTACCCAGCCACACCACTCAAGCGCTGCAACCACTGGATCGCAGTTTTTTTAAGCCTTTTAAAACATTCTTTGCTGCTGAAACACAAAATTGGGTAGTGTCACACAAGGAACGAAAGATTAATCGATTAGTTGCAGGAAAACTTATTGGGAATGCGTGGACCCGAGCAGCCACGAGTTCCAATGCGATTTCGGGATTTAGGGCTTGTGGTTTTTACCCTTTCAATCCCTCTGCAGTTCCAGAGAGCTTTTTTGCAATATCTGACATTTCTTTGAGTAATCAAAGGCCTACAGAAGACAATGCAGGTGAAAATGATGCACCAGAACCGGAACAAGTTTCATCTAATAGATCAAGTCCTGTAGTTGATCGAGTTCTTTCTAACGTTACTCCTAATTATATGGATATTTATTATAGAAATGAAGAAGCTCTTGAGCAGGAACCAGGTCCATTCAATGTACAAACTCTGGAAGTCGGTCTAAATCTATCCAACGTTTCTCCTTGTAATACGGATCAACCAGATAGGAGATTTTCTAATTCAAGCCCATCAATTCTTTCACAGAATAATAATATTATCAACATTGAGGAACTAGAAACACCAAGCAAATATTTGCAAGAATCTTCGCCGGTGCCAATTGTTCCGGTTCCATTTCATAAGAGAGGAAAACAATCAGCTGCAATTTTAAACAGTAAAGAAAATATTGAAGCGAAGAAATCTAAAGTTAAAGGTAAAGCTACTCCAGGAATACGTTGTAAAAATAAATGTCGAACAGCTACAGCTGATGTACAGAAGAAAGTGTTACGAACTGCAGTCAAGTTTCCAAAGAAGATTCCAGCCAAATGTATTAAGAAAAGAAAGGGCATTAGAGAATCTAGTGATGAAATGACCATCTCGGATATTTCTAATGAATCTGATTCAGATATCGACCAGGCGAGAGCAGGTGAAATTGTTCTACATAAAAAAAAACAGAGATCTCAAGCTAAGATTCAGAGTAAAGTTCCAGCAAAAAATAATAAGAAAAGACGAATAGAATACAAGGAGTCGAGTGATGAAATATCGATCTCAAATAATTCGGATGAATCTGAGTCAGAGGCATACAAGGATTGGGAATGCAAAGAATGCTCTGAAGAATATAAAAAGACCAAATCAACTGCAGATTTGATACAATGTTTAATGTGTAAAAAATGGCTACATGAGGATTGTACCATGTACGGCGACTATTGCAATAAATGCGTTCCGCCTCTGTACCGAGGACCAGGCTCCTCTTATGGTCCCAGTTCATCTGCTGGAGTTCAAGATGTAGAATAA
- Protein Sequence
- MPRKYIRKVGVRPRAEWTQEALIAAIDEISRGILGINEISRRYGIPSRTLRRRFANKNTEKLTLGKHPLLDFVNEKRLVSHIQKLEKAGFPPTRDMIRRLAFEFAEKLGKETHFDKETRKAGPHWLTSFLERNKELSIRQAEGLSVAKGLNRDEVNKMFELLLKVMTEHDLLDKPDRIYNVDETGVQLNNSTGKVIATRGARVVHSITSGEKGETLSVIACCNAVGNFLPPVVIIKGVNKKPEFQDGLPPGSEVYMNRKSAYVNAELFHKWLKEHLVPKKPIGKIILILDGYSSHTNAIDMLQTAEENDIILFCLPSHTTQALQPLDRSFFKPFKTFFAAETQNWVVSHKERKINRLVAGKLIGNAWTRAATSSNAISGFRACGFYPFNPSAVPESFFAISDISLSNQRPTEDNAGENDAPEPEQVSSNRSSPVVDRVLSNVTPNYMDIYYRNEEALEQEPGPFNVQTLEVGLNLSNVSPCNTDQPDRRFSNSSPSILSQNNNIINIEELETPSKYLQESSPVPIVPVPFHKRGKQSAAILNSKENIEAKKSKVKGKATPGIRCKNKCRTATADVQKKVLRTAVKFPKKIPAKCIKKRKGIRESSDEMTISDISNESDSDIDQARAGEIVLHKKKQRSQAKIQSKVPAKNNKKRRIEYKESSDEISISNNSDESESEAYKDWECKECSEEYKKTKSTADLIQCLMCKKWLHEDCTMYGDYCNKCVPPLYRGPGSSYGPSSSAGVQDVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00794357;
- 90% Identity
- iTF_01532963; iTF_00037731; iTF_00037732; iTF_01533867; iTF_01192624; iTF_00237429; iTF_00037730; iTF_01029188; iTF_01532964; iTF_01029189; iTF_01532965; iTF_00037734; iTF_00037735; iTF_00037736; iTF_00037737; iTF_00123309; iTF_00038704; iTF_00906075; iTF_00072112; iTF_00281121; iTF_00123304; iTF_00123305; iTF_00667369; iTF_00123306; iTF_00123307; iTF_01531915; iTF_00726254; iTF_01093010; iTF_01026037; iTF_01531927; iTF_01026043; iTF_01026044; iTF_01026048; iTF_00622769; iTF_00622770; iTF_00622771; iTF_01534769; iTF_01026036; iTF_00448981; iTF_01440953; iTF_00745596; iTF_00745595; iTF_00928606; iTF_01440958; iTF_00928607;
- 80% Identity
- -