Llea021421.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- -
- Assembly
- GCA_949152455.1
- Location
- OX424480.1:5473141-5475434[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-08 2.4e-05 24.6 0.0 1 44 18 61 18 62 0.93 2 3 6.5 3.6e+03 -1.5 0.0 14 23 142 150 135 152 0.70 3 3 8 4.5e+03 -1.8 0.1 28 41 648 662 640 664 0.72
Sequence Information
- Coding Sequence
- ATGCCTCGCAAATACGTAAGAAAGGTTGGAGTTCGTCCACGAGCTGAATGGACACAAGAGGCATTAATAGCTGCTATGAATGAAATGTCGAGAGGCATTCTTGGTGTCAACGAAATATCTCGTAGATATGGGATTCCATCTAGAACATTAAGGAGaagatttgaaaacaaaaacactgAAAAACAGACATTAGgaaaaCACCCTCTTCTTGATTTTGAAAACGAAAAACGTTTAGTGAACCACATACAGAAATTAGAAAAAGCTGGTTTCCCTCCAACCCGAGACATGATACGAAGATTGGCATTCGAGTTCGCTGAGAAACTGGGTAAAGAAACTAATTTTGATAAGGAGACTCGAAAGGCTGGGCCGCATTGGTTAAGATCATTTTTAGAACGTAATACAGAGCTAAGTATTCGTCAGGCAGAAGGCTTATCAGTTGCAAGAGCACAGGGATTAAATCGAGATGAAGTTAACAAAATGTTTGAACTACTGCTTAAAGTGATGACAGAGCATGATTTACTGGATAAACCGGATAGGATTTACAATATAGATGAGACAGGCGTCCAATTAAATAACTCTACTGGAAAAGTTATTGCTACAAGAGGCGCAAAATTAGTCCATTCTATTACTTCTGGTGAAAAAGGTGAAACACTATCGGTAATAGCGTGCTGTAATGCTGTAGGAAACTTTCTCCCCCCTGTAGTCATCATCAAAGGAGTAAACAAGAAACCAGAATTTCAGGATGGGCTCCCACCCGGATCAGAAGTCTATATGAATAGAAAATCCACGTACGTGAATGCGGAACTATTTCACAAGTGGCTGAAAGAACACCTTGTACCCAAAAAACCAATAGGAAAGATTATTTTGCTTCTGGATGGTCATTCTTCTCACACGAATGCAATAGATATGCTTCAAACTGCCGAAGaaaatgatataattttattttgtctacCCAGTCACACCACTCAAGCACTTCAACCACTGGATCGCAGTTTCTTTAAGCCTTTTAAAACATTCTTTGCAGCTGAAACAAGAAATTGGGTAGTGTCACACAAGGAACGAAAGATTAATCGATTAGTTGCAGGAAAACTCATTGGGAATGCGTGGACCAGAGCGGCCACGAGTTCTAATGCGATTTCGGGATTTAGGGCTTGTGGTATTTACCCTTTCAATCCTTCTGCAGTTCCAGAGAGCTTTTTTGCAATATCGGACATTTCTTTGAATAACCGACGGTCTGTAGAAAACAATGCAGTTCAAAATGATGCTCCAGAACAGGAACAAGATTCACCTAACAGATTAACTCCTGTAGTTGATAGAGTCCTTTCTAACATTACTCCTATTTATAtggatattttttatacaaatgaaGAAGCTTTTGAACAGGAACCAGGTCCACCCAATGTACAAACTCTGGGAGTCGGCCTAAATCTATCCAACATATCTCCTTGTAATACGGATCAACCAGATAGGAGACTTTCAAATTCCAGCCCATCAATTCTTTCACAGAATAACAACATTATCAACATGGATGAACTAGAAACACCAAGCAAATATTTGCAAGAATGTTCGCCGGTGCCAATTGTTCCGGTTCCATTTCATAAGAGGGGAAAACAATCAGCtgcaattttaaatacaaaGGAAAATATCGAATCGAAGAAATCTAAAGTTAAAGGTAAAGCTACTCCAGGAATacgttgtaaaaataaacatcgACCAGCTAAAGCTGATGTACAGAAAAAAGTGTTAAGACCTGTAGTCAAGTTTCCAAAAAAAGTTCAAGCCAAATGTattaagaaaacaaaagaaattagCGAATCAAGTGATGAAATGACAATCTCGGATATTTCTTATGAAACTGATTCAGACATCGACCAGGGCCGACCAAGTGAAGCTGATCGGCACAAAAACAATCGAAGATCTCAAGCTAAGCTTCAAAGGAAAGTTCCAGCAAAAACTATTAAGAAAAGACGAATAGAACACAAGGAATCTAGTGATGAAATGTCCATCTCAAATAATTCAAATGAATCTGAGTCAGACGCATACAATGATTCGGAATGCAAAGAATGCTTTGAAGAATATAAAAAGACCAAATCAACTGCAGATTGGATACAATGTGTAATGTGTAAAATATGGCTACATGAGGATTGTACCACGTACGGCGACTATTGTAATAAATGCGGTAGGATTAAACGAATGAATACGAAAAATACAACGTAG
- Protein Sequence
- MPRKYVRKVGVRPRAEWTQEALIAAMNEMSRGILGVNEISRRYGIPSRTLRRRFENKNTEKQTLGKHPLLDFENEKRLVNHIQKLEKAGFPPTRDMIRRLAFEFAEKLGKETNFDKETRKAGPHWLRSFLERNTELSIRQAEGLSVARAQGLNRDEVNKMFELLLKVMTEHDLLDKPDRIYNIDETGVQLNNSTGKVIATRGAKLVHSITSGEKGETLSVIACCNAVGNFLPPVVIIKGVNKKPEFQDGLPPGSEVYMNRKSTYVNAELFHKWLKEHLVPKKPIGKIILLLDGHSSHTNAIDMLQTAEENDIILFCLPSHTTQALQPLDRSFFKPFKTFFAAETRNWVVSHKERKINRLVAGKLIGNAWTRAATSSNAISGFRACGIYPFNPSAVPESFFAISDISLNNRRSVENNAVQNDAPEQEQDSPNRLTPVVDRVLSNITPIYMDIFYTNEEAFEQEPGPPNVQTLGVGLNLSNISPCNTDQPDRRLSNSSPSILSQNNNIINMDELETPSKYLQECSPVPIVPVPFHKRGKQSAAILNTKENIESKKSKVKGKATPGIRCKNKHRPAKADVQKKVLRPVVKFPKKVQAKCIKKTKEISESSDEMTISDISYETDSDIDQGRPSEADRHKNNRRSQAKLQRKVPAKTIKKRRIEHKESSDEMSISNNSNESESDAYNDSECKECFEEYKKTKSTADWIQCVMCKIWLHEDCTTYGDYCNKCGRIKRMNTKNTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00794357;
- 90% Identity
- iTF_00037739;
- 80% Identity
- -