Basic Information

Gene Symbol
-
Assembly
GCA_017607565.1
Location
JAANIB010005291.1:579443-582322[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.82 4.7e+02 0.1 0.0 22 46 226 252 216 252 0.77
2 5 4.6e-13 2.6e-10 39.3 0.6 1 45 258 304 258 305 0.95
3 5 1.2e-07 7.1e-05 21.9 0.5 2 43 312 357 311 360 0.94
4 5 9.8e-09 5.6e-06 25.4 0.0 1 45 366 411 366 412 0.92
5 5 7.1e-11 4e-08 32.3 0.0 3 44 421 462 420 464 0.95

Sequence Information

Coding Sequence
ATGAGCGAATTGGACGAGTTGGACCTCTTGGATATCCAAGCTGATATTCAGGCTCTTGATGAAGTTTTAGCTTGGtctgcgaaaaaaaaatcccAGCAACATGTTAGCAGCAATCAACAATCTGACGTTTCATCGAATGTCGACGCTGAGAACGACGATGACTGTGTCAACTATCTCCAAGCGAATCAAGAAATTGAAAACTCTCTAAATGCTTACgagattaatacaaaattgatttCGGGCTTAACGATAGCTAAGAAGAAATTGACTGCTCTGTTGGAAGAGTGTGAGCAGAAGATAAATCTACTGGACGAGAAGTTGAAGAAATCCACGGATGAGTCGAGCTCAAATTTCAAATTGGCAATCAGTAATGCTGGTATACCATACTTCAAAGACAAGGATTATTTCGGTGCTCCCAAGAATATTGATACTAAGCGAAAGGAAGCTGCCGGTGAGGTGTTCCttttgaatttgaaaaagCCTAATCGTTGGTCAGGAAAAGACAGAGAAATGCTTTTAAGTGCCATAAACAATCAAGCTATCGAATCTGTACTGTCTGGAGGATTCAACAAAGAAATTGACGAGTCGACATCTAATGATCAAACTAAAAAAACTACATTAGTGATTCCCAGAAACTTTAACGAGATGGTGGGGCCGTTGGGTGCGAGAGAATTCGATTGGCACAAGATTTCTGTTATGGATTTCGACAATAAACATTCACCAGGCGAATGCAGGGCTATGTGGAATGTTTACTTGCATCCTGCTTTTAAGAAAAGTGAATGGACAAATGCAGAAGATAAGAAACTGCTGAAATGTATTAGAGAATATAAATGTCAAGATTGGGATGCTATTGCGCAAAAATTAGACACAAACCGTAGCGCGTATCAATGTTTTATCAGATATAATACTATCAAAAAAGTACCGTTAGCTGGACAACCATGGACCAGGCAGGAGGACAAAcatcttacaaaaattataaacgcaATAAGGATCGGAGACTATATTTCTTGGTCCGATGTTGCTAATCATTTTCGGCACAGAACCAAGCAACAAATTTACGTACGATGGACGTATAGGAAAGCACCGCATTTGAGAAAAGGTAGATTCTCTCGTCAGGAAACATTAACTCTCCTGAAAGCGGTGCAGAAGTATGGCATggacttttgtaaaatttcaacCACCGTAATGTCACATCGAACTTCGGTACAACTCCAAGAGCGTTACCATACGGTGGTATCCAATATCTATAATCGATACAATGTTTGGACACTCAATGATGATATGATGTTAATTAATCTACAGTTGCAATATAGTAACGATTGGTCCAGAATAGCCAAGTATTTTTCTGATAAGACAAGAACACAAGTAAGACACCGATATAACgcattactaaaatatatagcaAAGGGTGTCAGTCTTGAAACTATACCTAGACTGCCTCTTACAATTcctaataaaagaaattttattaataaaaaatcatcatcCAATAAAACACTAAAaagacatattaaaaattcaatatttgagATGCAACctgttgtaaatatttttgatattcaatTAAGATTATATGAAGCTCTTTGTTTTCCACtttcaattaaatctaataattcTGAAGAACTTTACAATATTGAACAGCTTATATgtgatactaaaaaattatacaacacattaaatttattaaacgccAATCTTGATATTCCAGATGATTTTCTGAATTATGTGCAGTtgaataataaagagaaacaacttttaatttctttaaaagaatatttaaacgtAAGACATACAGAGTATGAACAGAGTAATGAACTGAGAATAGAAAGATATAGTATACGAATGTTCGGTTGTGCCCCACAAATTAAtgaagatgatttttttataccacCACTTCCATTTGATGGACATGTAAAGctcagaaaaataattaaaaatcaaaaaaatactataaactataatttagccattaatgaaaaatttcttattgatGTACCTGCAGATTTCTCTATAATTCCCTCCGTATTTccttttgttaatattgaGGAAGAAATTCAGTTTCACAAATTTGGTCAATTCTTAACAAGTGACTACCACAATTTTTTAgagcaaaaaaatttagatttatataaatcaataaaatgtatcttttcTGATAAATCAGAGGTAAGTTTGGAAGCTTATGAACAATCGAAATTAAACAAGTTTAACAAGGAAACTACTAGTGTCAAAGAAGACGTTGAAGATGTAAATATGGATAATATAATTCCGCCAAATCAAGCGACTTTGATAggtataaagaatttatttctttggaAATTACTGTACGACTATCAACACGAATCTCATCTACGATGTGAATTGATGGCAtcaattgaaaatgaattaaaatcaaaacgtAATGCGACAAATTCTGAATTTATGGAAATAGAGAGCGCCGAATATCAGCTGCTGCGAGTTCGCCTACGACAATTATTTGAACTTCCAATAGGTTTGTCGAACACTATATTAGAAGTGCAAGGGCCAgaagcaatatttttaaaagataaaccGACTCAtcgaattatttcaacaaaaagaAAGTTTGAAGACGATAGTGAAGAtgaaaatacagaaataaatcCTTTggaactaaataaaaaaaataattcaaacgtTCCGACTGATAGTAATTCTCAACTCAACTTGGACATTGCATTGACAAACCTTCCTAGAGTACGTAGCTGTAAAAtagttaagaaaaaatataaaatcactAGAAAA
Protein Sequence
MSELDELDLLDIQADIQALDEVLAWSAKKKSQQHVSSNQQSDVSSNVDAENDDDCVNYLQANQEIENSLNAYEINTKLISGLTIAKKKLTALLEECEQKINLLDEKLKKSTDESSSNFKLAISNAGIPYFKDKDYFGAPKNIDTKRKEAAGEVFLLNLKKPNRWSGKDREMLLSAINNQAIESVLSGGFNKEIDESTSNDQTKKTTLVIPRNFNEMVGPLGAREFDWHKISVMDFDNKHSPGECRAMWNVYLHPAFKKSEWTNAEDKKLLKCIREYKCQDWDAIAQKLDTNRSAYQCFIRYNTIKKVPLAGQPWTRQEDKHLTKIINAIRIGDYISWSDVANHFRHRTKQQIYVRWTYRKAPHLRKGRFSRQETLTLLKAVQKYGMDFCKISTTVMSHRTSVQLQERYHTVVSNIYNRYNVWTLNDDMMLINLQLQYSNDWSRIAKYFSDKTRTQVRHRYNALLKYIAKGVSLETIPRLPLTIPNKRNFINKKSSSNKTLKRHIKNSIFEMQPVVNIFDIQLRLYEALCFPLSIKSNNSEELYNIEQLICDTKKLYNTLNLLNANLDIPDDFLNYVQLNNKEKQLLISLKEYLNVRHTEYEQSNELRIERYSIRMFGCAPQINEDDFFIPPLPFDGHVKLRKIIKNQKNTINYNLAINEKFLIDVPADFSIIPSVFPFVNIEEEIQFHKFGQFLTSDYHNFLEQKNLDLYKSIKCIFSDKSEVSLEAYEQSKLNKFNKETTSVKEDVEDVNMDNIIPPNQATLIGIKNLFLWKLLYDYQHESHLRCELMASIENELKSKRNATNSEFMEIESAEYQLLRVRLRQLFELPIGLSNTILEVQGPEAIFLKDKPTHRIISTKRKFEDDSEDENTEINPLELNKKNNSNVPTDSNSQLNLDIALTNLPRVRSCKIVKKKYKITRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2