Basic Information

Gene Symbol
-
Assembly
GCA_001594055.1
Location
NW:221941-226708[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3 2.3e+03 -1.9 0.0 3 17 163 177 161 178 0.88
2 6 0.8 6.1e+02 -0.1 0.0 22 46 225 251 219 251 0.75
3 6 4.2e-13 3.2e-10 39.2 0.6 1 45 257 303 257 304 0.95
4 6 1.4e-07 0.00011 21.6 0.8 4 43 313 356 311 359 0.96
5 6 4.3e-12 3.3e-09 36.0 0.0 1 45 365 410 365 411 0.95
6 6 9.6e-10 7.4e-07 28.5 0.0 3 43 420 460 419 463 0.95

Sequence Information

Coding Sequence
ATGAGCGAATTTGACGATTTGGACCTATTGGATATCCAAGCTGATATTCAGGCTCTTGATGAAGCTTTAGCCTTGTctgcgaaaaaaaaatcccAGCAATATGTTAGCTGTAATCAACAATCTGACGTTTCATCGAATGTCGGCGCTGAGGACGATGATGACCATGTCAACTATCTCCATGCGAATCaggaaattgaaaattctcTAAACGCTTACGAGATTAATACAAGATTGATCTCAGGTTTGACGATAGCTAAGAAGAAATTGACTACTCTGTTGGAAGAGTGTGAGCAGAAGCTAAGGCTACTGGATGAGAAGTTGATGAAATCCACGGATGAATCGAGCTCAAATTCCAAATTGGCAATCAGCAATGCCGGTATACCATACTTCAAGGACAAGGATTATTTCAGTGCTCCCAAGAATATTGATACTAAGCGAAAGGAAGCTGCTAGTGAGGTGTTTCttttgaatttgaaaaagCCGAGCCGCTGGTCAGGAAAAGACAgagaaatacttttaaatgccATAAACAATCAAGCTATTGAATCTGTACTGTCTAGAGGAGTCAACAAAGAAATTGACGAGTCGATATCTGATCAAATTAAGAAAACTAAATTAGTAATTCCTAGAAATTTTAACGAGATAGTGGGCCCGTTGGGTGCGAAAGAATTCGATTGGCACAAGATTTCTGTTATGGATTTCGATAATAAACATTCACCAGGCGAATGCAGGGCTATGTGGAATGTCTACCTACATCCTGCTTTCAGGAAAAGTGAATGGACAAATGCAGAAGATAAGAAACTGTTGAAATGTATCAgagaatataaatgtcaagATTGGGATGCTATTGCACAAAAATTAGACACAAACCGTAGCGCGTATCAATGTTTTATCAGATATAATACTATCAAAAAAGTACCGTTAGCTGGACAATTCTGGACCAGGCAGGAGGACAAACATCTtacaaaagttataaatacaatCAAGATCGGAGATTACATTTCTTGGTCCGACGTTGCTAATCATTTTCGGCACAGAACCAAGCAACAAATTTACGTACGGTGGACGTATAGGAAAGCACCGCATTTGAGAAAAGGTAGATTCACTCATCAGGAAACATTGACTCTCCTGAAAGCGATGCAGAAGTATGGCACGGACTTCTCTAAAATTTCAAGCACCGTAATGCCACATCGAACTTCGGTACAACTCCAAGAACGTTACCAAACGGTGGTGTCCAATATCAATAATCGGTACAATGTTTGGACACTCAACGAtgatataatgttaattaatctaCAGTTGCAGTACAGTAATGATTGGTCCGGAATATCCAAGCATTTTTCTGATAAAACAAGAACACAAGTAAGACATCGATACATCgcattactaaaatatatagcgAAGGGTATCAGTCTTGAAACTATACCTAGACGACCCCTTACAATTCCCAatagaagaaattttattaataaaaaatcatccaATAAAGcatcaaaaatacatattagaaatgtaatatttgagaTGCctgttgtaaatatttttgatattcagTTAAGATTGTATGAAGCTTTTTGTTTTCCACTTTCAATTAAACCTAATAGTTCTGAAGAACTTTACGACATTGAACAGCTTAGGCGtgatactaaaaaattacactacacattgaatttattaaacgcCAATCTTGATATTCCAGATGATTTTCTGAATTATGTGCAGTTGAATAACAAAGAGAAACAACTTTTGGtttctttaaaagaatatttaaacgtAAAACATGTACAGAATAATGacctaatagaaaaatatagcaTACGAATGTTCGGTTGTGCTGTAGAAGTTAATGAAGGGGACTTTTTTATACCACCACTTCCATTTGATGGACATGTAAAgctcagaaaaataattaaaaatcaaaagaacacgtctataaactataatttaggcattaatgaaaaatttcttattgatGTACCTGCAGATTTCTCTATGACTCCCTCTGTATTTCCTTTTGTTGGTATTGAGGAAGAAATTCAGTTTCACAAATTTGGTCAGTTCTTAACAAGTGATTACCACAATTTTTTAGAgcaaaatttagatttatataaatcaataaaatgtatcttttcTTTTGCTAAAACACAGATTTCAAAAGAGACTTTATTAGAACACAATAAACTGAATGTGAATTCAGAGACAAGTTCGGAAGATTGCAAACAAGTGgaattaaataagttaaagGAAGCTGGTAGATCAGAAGTAAGTTTGGAAGCTTACGAACAATTGGAATTAAACAAGTTTAATAAGGAAACTATTACTGTCAAAGAAGACAAAGAAGATGAAGATGTAAATATGGGTAATATAATTTCGCCAAATCAAGCGACTTTAATAGGTATGAAGAACTTGTTTCTTTGGAAATTACTGTACGATTATCAACACGAATCTCATGTACGATGTGAATGGATGGCATCATTTGGAAATGAATCAAAATCAGAAGGTATTGCGACAAATTCTGAATTTACGGGAATGGAGAGTACCGAATACCAGCTGCTGCGAGCTCGCCTACGGCAATTATTTGAACTTCCAATAGGTTTGTCGAACACTATACTGGAAGTGCAAGGGCCAGaagcgatatttttaaaagataagcAGACTCGTCgaattatttcaagaaaaagaaagtttgaAGACGATGTGTGTGAAAATACAGAGATAAATCCTTTGaaactaaataaaagaaatgactCAAACGTTTCGGCTGATAGCAATTCTCAACTCAATTTGAACATTACGTCGGGAAACCATTCTAGAATGCGTAGCTGTAAAAtagttaagaaaaaatttaaaatcactaGAAAATAA
Protein Sequence
MSEFDDLDLLDIQADIQALDEALALSAKKKSQQYVSCNQQSDVSSNVGAEDDDDHVNYLHANQEIENSLNAYEINTRLISGLTIAKKKLTTLLEECEQKLRLLDEKLMKSTDESSSNSKLAISNAGIPYFKDKDYFSAPKNIDTKRKEAASEVFLLNLKKPSRWSGKDREILLNAINNQAIESVLSRGVNKEIDESISDQIKKTKLVIPRNFNEIVGPLGAKEFDWHKISVMDFDNKHSPGECRAMWNVYLHPAFRKSEWTNAEDKKLLKCIREYKCQDWDAIAQKLDTNRSAYQCFIRYNTIKKVPLAGQFWTRQEDKHLTKVINTIKIGDYISWSDVANHFRHRTKQQIYVRWTYRKAPHLRKGRFTHQETLTLLKAMQKYGTDFSKISSTVMPHRTSVQLQERYQTVVSNINNRYNVWTLNDDIMLINLQLQYSNDWSGISKHFSDKTRTQVRHRYIALLKYIAKGISLETIPRRPLTIPNRRNFINKKSSNKASKIHIRNVIFEMPVVNIFDIQLRLYEAFCFPLSIKPNSSEELYDIEQLRRDTKKLHYTLNLLNANLDIPDDFLNYVQLNNKEKQLLVSLKEYLNVKHVQNNDLIEKYSIRMFGCAVEVNEGDFFIPPLPFDGHVKLRKIIKNQKNTSINYNLGINEKFLIDVPADFSMTPSVFPFVGIEEEIQFHKFGQFLTSDYHNFLEQNLDLYKSIKCIFSFAKTQISKETLLEHNKLNVNSETSSEDCKQVELNKLKEAGRSEVSLEAYEQLELNKFNKETITVKEDKEDEDVNMGNIISPNQATLIGMKNLFLWKLLYDYQHESHVRCEWMASFGNESKSEGIATNSEFTGMESTEYQLLRARLRQLFELPIGLSNTILEVQGPEAIFLKDKQTRRIISRKRKFEDDVCENTEINPLKLNKRNDSNVSADSNSQLNLNITSGNHSRMRSCKIVKKKFKITRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00015969;
90% Identity
-
80% Identity
-