Acoo006384.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- -
- Assembly
- GCA_001594045.1
- Location
- NW:739326-745154[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.97 6e+02 -0.2 0.0 22 46 226 252 220 252 0.76 2 5 2e-12 1.3e-09 37.2 0.4 1 45 258 304 258 305 0.95 3 5 3.2e-08 2e-05 23.8 0.5 2 43 312 357 311 360 0.95 4 5 2.9e-09 1.8e-06 27.1 0.0 1 45 366 411 366 412 0.92 5 5 1.4e-10 8.8e-08 31.3 0.1 4 44 422 462 420 464 0.96
Sequence Information
- Coding Sequence
- ATGAGTGAATTTGACGACTTGGACCTCTTGGATATCCAAGCTGATATTCAGGCTCTTGATGAAGTTTTAGCTCTGTCtgcgaaaaaaaaatcccAGCAACATGTTAGCAGCAATCAACAATCTGATGTTCCGTCGAATGTCGACGCTGAGGATGACGATGACTGTGTCAACTATCTCCAAGCGAATCAAGAAATTGAAAAGTCTCTAAACgcttatgaaattaatacaagATTGATTTCGGGCTTGACAATAGCTAAGAAGAAATTGACTGCTCTGTTAGAAGAGTGTGAGCAGAAGATAAGGCTACTGGACGAGAAGTTGAAGAAATCCACGGATGAGTCGAGTTCAAATTCCAAATTGGCAATCAGTAATGCTGGTATACCATATTTCAAAGACAAGGATTATTTCGGTGCTCCCAAGAATATTGATACTAAGCGAAAGGAAGCTGCTGGTGAAGTGTTCcttttgaatttgaaaaagCCTAATCGTTGGTCAGGAAAAGACAGAGAAATGCTTTTAAGTGCCATAAACAATCAAGCTATCGAATCTGTATTGTCTGGAGGATTCAACAAAGAAATTGACGAGTCGACATCTAATGATCAAACTAAGAAAACTACATTAGTGATTCCCAGAAACTTTAACGAGATGGTGGGACCGTTGGGTGTGAGAGAATTCGATTGGCACAAGATTTCTGTTAtggattttgataataaacatTCACCAGGCGAATGCAGGGCTATGTGGAATGTCTACCTGCATCCTGCTTTCAAGAAAAGTGAATGGACAAATGCAGAAGATAAGAAATTGCTGAAatgtattatagaatataaatgtcAAGATTGGGATGCTATTGCGCAAAAATTAGACACAAATCGTAGCGCGTATCAATGTTTTATCAGATATAATACTATCAAAAAAGTACCATTAGCTGGACAACCATGGACCAGGCAGGAGGACAAACatcttgcaaaaattataaacgcaATCAAGATCGGAGATTATATCTCTTGGTCCGATGTTGCTAATCATTTTCGGCACAGAACCAAGCAACAAATTTATGTACGATGGACGTATAGGAAAGCACCGCATTTGAGAAAAGGTAGATTCACTCATCAGGAAACATTAACTCTCCTGAAAGCGGTGCAGAAGTATGGCATGGACTTCTGTAAAATTTCAACCACTGTAATGTCACATCGAACTTCGGTACAACTCCAAGAGCGTTATCATACGGTGGTATCCAATATCAATAATCGATACAATATTTGGACGCTCAATGATGATATGATGTTAATTAATCTACAGTTGCAATATAGTAACGATTGGTCCAGAATagccaaatatttttctgataaaacAAGAACACAAGTAAGACATCGATATAACGCATTACTAAAGTATATAGCAAAGGGTGTCAGTCTTGAAACTATACCTAGACTGCCCCCTACAATtcccaataaaaaaaattttattaataaaaaatcatcaccCAATAAAGCACCAAAAagacatattaaaaatgcaatatttgaGATACAATctgttgtaaatatttttgatattcagTTAAGATTATATGAAGTTCTTTGTTTTCCACTTTCAATTAAACCtaataattctgaaaaacTTTACAGCATTGAACAGCTTATACgtgatactaaaaaattatacaacacattaactttattaaacgCCAATCTTGATATTCCAGATGATTTTCTGAATTATGTGCAGTTGAATAACAAAGAGAAAcaacttttaatttctttaaaaaaatatttaaatgtaagacATATACAGAGTAATGAactgatagaaaaatatagtacACGAATGTTCGGTTGTGCCTCACAAGTTAATGAaggtgatttttttataccacCACTTCCATTTGATGGACATGTAAAgctcagaaaaataattaaaaatcaaaaaaacacatctataaattataatttagccattaatgaaaaatttcttattgatgTACCTACAGATTTCTCTATAATTCCCTCCGTATTTCCTTTTGTTAATATTGAGGAAGAAATTCAGTTTTACAAATTTGGTCAATTCTTAACAAGTGATTACCATAATTTTTtagagcaaaaaaatttagatttatataaatcaataaaatgtatcttttCTTTTGCTGAAAAAACACAGATGTCAAAAGAAACTTTATTAGAACACAATAAACTGAATGTGAATTCAGAAATCAGTTCGGAAGATTACGAACAAGTGgaattaaataagttaaagaAAGCTGATAAATCAGAGGTAAGTTTGGAAGCTTACGAACAATCGAAATTAAACAAGTTTAACAAGGAAACTACGAGTGTCAAGGAAGACGTTGAAGATGTAAATATGGGTAATATAATTCCACCAAATCAAGCGACTTTGACAggtatgaagaatttatttctttggaaATTACTGTACGACTATCAACACGAATCTCATCTACGATGTGAATTGATGGCATCATTTGGAAatgaatcaaaatcaaaacGTAATGCGACAAATTCTGAATTTATGGAAATGGAGAGCGCCGAATATCAGCTGCTACGAGTTCGCTTACGGCAATTATTTGAACTTCCAATAGGTTTGTCAAATACTATACTGGAAGTGCAAGGACCagaagcaatatttttaaaagataagtCGACTCATCgaattatttcaacaaaaagaAAGTTTGAAGACGATAGTGAAGAcgaaaatacagaaataaatcCTTTGGaactaaataaaagaaacaattcaAACGTTTCGACTGATAGCAATTCTCAACTCAACTTGGACATTGCATTGACAAATCTTCCTAGAGTACGTAGCtgtaaaatagttaaaaaatataaaatcactaGAAAATAA
- Protein Sequence
- MSEFDDLDLLDIQADIQALDEVLALSAKKKSQQHVSSNQQSDVPSNVDAEDDDDCVNYLQANQEIEKSLNAYEINTRLISGLTIAKKKLTALLEECEQKIRLLDEKLKKSTDESSSNSKLAISNAGIPYFKDKDYFGAPKNIDTKRKEAAGEVFLLNLKKPNRWSGKDREMLLSAINNQAIESVLSGGFNKEIDESTSNDQTKKTTLVIPRNFNEMVGPLGVREFDWHKISVMDFDNKHSPGECRAMWNVYLHPAFKKSEWTNAEDKKLLKCIIEYKCQDWDAIAQKLDTNRSAYQCFIRYNTIKKVPLAGQPWTRQEDKHLAKIINAIKIGDYISWSDVANHFRHRTKQQIYVRWTYRKAPHLRKGRFTHQETLTLLKAVQKYGMDFCKISTTVMSHRTSVQLQERYHTVVSNINNRYNIWTLNDDMMLINLQLQYSNDWSRIAKYFSDKTRTQVRHRYNALLKYIAKGVSLETIPRLPPTIPNKKNFINKKSSPNKAPKRHIKNAIFEIQSVVNIFDIQLRLYEVLCFPLSIKPNNSEKLYSIEQLIRDTKKLYNTLTLLNANLDIPDDFLNYVQLNNKEKQLLISLKKYLNVRHIQSNELIEKYSTRMFGCASQVNEGDFFIPPLPFDGHVKLRKIIKNQKNTSINYNLAINEKFLIDVPTDFSIIPSVFPFVNIEEEIQFYKFGQFLTSDYHNFLEQKNLDLYKSIKCIFSFAEKTQMSKETLLEHNKLNVNSEISSEDYEQVELNKLKKADKSEVSLEAYEQSKLNKFNKETTSVKEDVEDVNMGNIIPPNQATLTGMKNLFLWKLLYDYQHESHLRCELMASFGNESKSKRNATNSEFMEMESAEYQLLRVRLRQLFELPIGLSNTILEVQGPEAIFLKDKSTHRIISTKRKFEDDSEDENTEINPLELNKRNNSNVSTDSNSQLNLDIALTNLPRVRSCKIVKKYKITRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00015969;
- 90% Identity
- iTF_00015305;
- 80% Identity
- -