Basic Information

Gene Symbol
-
Assembly
GCA_017607455.1
Location
JAANHZ010000501.1:667180-670113[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.77 4.6e+02 0.1 0.0 22 46 226 252 216 252 0.77
2 5 4e-14 2.4e-11 42.6 0.5 1 45 258 304 258 305 0.95
3 5 7.2e-09 4.3e-06 25.8 0.5 2 43 312 357 311 360 0.95
4 5 9.1e-09 5.4e-06 25.4 0.0 1 45 366 411 366 412 0.92
5 5 1.3e-10 7.5e-08 31.4 0.1 4 44 422 462 420 464 0.96

Sequence Information

Coding Sequence
ATGAGCGAATTGGACGAGTTGGACCTCTTGGATATCCAAGCTGATATTCAGGCTCTTGATGAAGTTTTAGCTTGGtctgcgaaaaaaaaatctcagcAACATGTTAGCAACAATCAACAATCTGACGTTTCATCGAATGTCGACGTTGAGAACGACGATGACTGTGTCAACTATCTCCAAGTGAATCAAGAAATTGAAAACTCTCTAAATGCTTACGAGATTAATACAAGATTGATTTCGGGCTTGACGATAGCTAAGAAGAAATTGACTGCTCTGTTGGAAGAGTGTGAGCAGAAGATAAGTCTACTGGACGAGAAGTTGAAGAAATCCACGGATGAGTCGAGCTCAAATTTCAAATTGGCAATCAGTAATGCTGGTATACCATACTTCAAAGACAAGGATTATTTCGGTGCTCCCAAGAATATTGATACTAAGCGAAAGGAAGCTGCCGGTGAGGTGTTCCttttgaatttgaaaaagCCTAACCGTTGGTCAGGAAAAGACAGAGAAATGCTTTTAAGTGCCATAAACAATCAAGCTATCGAATCTGTATTGTCTGGAGGATTCAACAAAGAAATTGATGAGTCGACATCTAATGATCAAACTAAGAAAACTACATTAGTGATTCCCAGAAACTTTAATGAGATGGTGGGGCCGTTGGGTGCGAGAGAATTCGATTGGCACAAGATTTCTGTTATGGATTTCGACAATAAACATTCACCAGGTGAATGCAGGGCTATGTGGAATGTTTACCTGCATCCTGCTTTCAAGAAAAGTGAATGGACAAATGCAGAAGATAAGAAACTGCTGAAATGTATTAGAGAATATAAATGTCAAGATTGGGATGCTATTGCGCAAAAATTAGGCACAAACCGTAGCGCGTATCAATGTTTTATCAGATATAATACTATCAAAAAAGTACCGTTAGCTGGACAACCATGGACCAGACAGGAGGACAaacatcttataaaaattataaacgcaATCAAGATCGGAGACTATATTTCTTGGTCCGATGTTGCTAATCATTTTCGACACAGAACCAAGCAACAAATTTACGTACGATGGACGTATAGGAAAGCACCGCATTTGATAAAAGGTAGATTCAGTCGTCAGGAAACATTAACTCTCCTGAAAGCGGTGCAGAAGTATGGCATggacttttgtaaaatttcaacCACCGTAATGTCACATCGAACTTCGGTACAACTCCAAGAGCGTTACCATACGGTGGTATCCAATATCTATAATCGATACAATATTTGGACACTCAATGATGATATGATGTTAATTAATCTACAGTTGCAATATAGTAATGATTGGTCCAGAATAGCCAAGTATTTTTCTGATAAGACAAGAACACAAGTAAGACACCGATATAACgcattactaaaatatatagcaaAGGGTGTCAGTCTTGAAACTATACCTAGACTGCCTCTTACAATTtccaataaaagaaattttattaataaaaaatcatcatcCAATAAAACACTAAAaagacatattaaaaattcaatatttgagATGCAACctgttgtaaatatttttgatattcaatTAAGATTATATGAAGCTCTTTGTTTTCCACtttcaattaaatctaataattcTGAAGAACTTTACAACATTGAACAGCTTATACgtgatactaaaaaattatacaacacattaaatttattaaacgccAATCTTGATATTCCAGATGATTTTCTGAATTATGTGCAGTtgaataataaagagaaacaacttttaatttctttaaaagaatatttaaacgtAAGACATGTACAGAGTAATGAACTGATAGAAAGATATAGTATACGAATGTTCGGTTGTGCCCCACAAGTTAAtgaagatgatttttttataccacCACTTCCATTTGATGGACATGTAAGGctcagaaaaataattaaaaatcaaaaaaatactataaactataatttagccattaatgaaaaatttcttattgatGTACCTGCAGATTTCTCTATAATTCCCTCCGTAtttccttttattaatattgaggAAGAAATTCAGTTTCACAAATTTGGTCAGTTCTTAACAAGTGACTACCACAATTTTTTAgagcaaaaaaatttagatttatataaatcaataaaatgtatcttttCTGATAAATCAGAGGTAAGTTTGGAAGCTTATGAACAATCGAAATTAAACAAGTTTAACAAGGAAACTACTAGTGTCAAAGAAGACGTTGAAGATGTAAATATGGATAATATAATTCCGCCAAATCAAGCGACTTTGATAggtataaagaatttatttctttggaAATTATTGTACGACTATCAACACGAATCTCATCTACGATGTGAATTGATGGCAtcaattgaaaatgaattaaaatcaaaacgtAATGCGACAAATTCTGAATTTATGGAAATGGAAAGCGCCGAATATCAGCTACTGCGAGTTCGCCTACGGCAATTATTTGAACTTCCAATAGGTTTGTCGAACACTATACTGGAAGTGCAAGGGCCAgaagcaatatttttaaaagataaaccGACTCAtcgaattatttcaacaaaaagaAAGTTTGAAGACGATAGTGAAGATgaaaatacagaaataaatcctttagaactaaataaaaaaaataattcaaacgtTCCAACTGATAGCAATTCTCAACTCAACTTGGACATTGCATTGACAAACCTTCCTAGAGTACGTAGCTGTAAAAtagttaagaaaaaatataaaatcactaGAAAA
Protein Sequence
MSELDELDLLDIQADIQALDEVLAWSAKKKSQQHVSNNQQSDVSSNVDVENDDDCVNYLQVNQEIENSLNAYEINTRLISGLTIAKKKLTALLEECEQKISLLDEKLKKSTDESSSNFKLAISNAGIPYFKDKDYFGAPKNIDTKRKEAAGEVFLLNLKKPNRWSGKDREMLLSAINNQAIESVLSGGFNKEIDESTSNDQTKKTTLVIPRNFNEMVGPLGAREFDWHKISVMDFDNKHSPGECRAMWNVYLHPAFKKSEWTNAEDKKLLKCIREYKCQDWDAIAQKLGTNRSAYQCFIRYNTIKKVPLAGQPWTRQEDKHLIKIINAIKIGDYISWSDVANHFRHRTKQQIYVRWTYRKAPHLIKGRFSRQETLTLLKAVQKYGMDFCKISTTVMSHRTSVQLQERYHTVVSNIYNRYNIWTLNDDMMLINLQLQYSNDWSRIAKYFSDKTRTQVRHRYNALLKYIAKGVSLETIPRLPLTISNKRNFINKKSSSNKTLKRHIKNSIFEMQPVVNIFDIQLRLYEALCFPLSIKSNNSEELYNIEQLIRDTKKLYNTLNLLNANLDIPDDFLNYVQLNNKEKQLLISLKEYLNVRHVQSNELIERYSIRMFGCAPQVNEDDFFIPPLPFDGHVRLRKIIKNQKNTINYNLAINEKFLIDVPADFSIIPSVFPFINIEEEIQFHKFGQFLTSDYHNFLEQKNLDLYKSIKCIFSDKSEVSLEAYEQSKLNKFNKETTSVKEDVEDVNMDNIIPPNQATLIGIKNLFLWKLLYDYQHESHLRCELMASIENELKSKRNATNSEFMEMESAEYQLLRVRLRQLFELPIGLSNTILEVQGPEAIFLKDKPTHRIISTKRKFEDDSEDENTEINPLELNKKNNSNVPTDSNSQLNLDIALTNLPRVRSCKIVKKKYKITRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00015969;
90% Identity
iTF_00015305;
80% Identity
-