Tcor006429.1
Basic Information
- Insect
- Trachymyrmex cornetzi
- Gene Symbol
- -
- Assembly
- GCA_001594075.1
- Location
- NW:81552-89094[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.75 6.4e+02 0.0 0.0 22 46 226 252 216 252 0.77 2 5 4.9e-13 4.2e-10 39.0 0.5 1 45 258 304 258 305 0.95 3 5 2.9e-08 2.5e-05 23.7 0.5 2 44 312 358 311 360 0.95 4 5 3.3e-10 2.8e-07 30.0 0.0 1 45 366 411 366 412 0.93 5 5 3.7e-11 3.1e-08 33.0 0.1 3 44 421 462 420 464 0.95
Sequence Information
- Coding Sequence
- ATGAGCGAATTTGATGACTTGGAGCTCTTGGATATCCAAGCTGATATTCAAGCTCTTGATGAAGTTTTAGCCTTGTCTGCGAAAAAAAAATCTCAGCAACATGTTAGCAGCAATCAACAATCTGACGTTTCGTCGAATGTCGACGCTGAGGACGATGATGATTATGTCAACTATCTCCAAGCGAATCAAGAAATTGAAAAGTCTCTAAACGCTTACGAGATTAATACAAGATTGATCTCGGGCTTGACGATAGCTAAGAAGAAATTGACTGATCTGCTGGAAGAGTGTGAGCAGAAGATAAGGCTACTGGACGAGAAGTTGAAGAAGTCCACAGATGAGTCGAGCTCAAATTCCAAATTGGCAATCAGCAATGCTGGTATACCATACTTCAAAGACAAGGATTATTTCAGTGCTCCCAAGAATATCGATACTAAGCGAAAGGAAGCTGTTGGTGAGGTGTTCCTTTTGAATTTGAAAAAGCCTAACCGCTGGTCAGGAAAAGACAGAGAAATGCTTTTAAGTGCCATAAACAATCAAGCTATCGAATCTGTACTGTCTGGAGGATTCAACAAAGAAATTAACAAGCCGACATCTGATAATCAAactaagaaaattaaattagtgCTTCCCAGAAACTTTAACGAGATGGTGGGGCCGTTGGGTGCGAGAGAATTCGATTGGCACAAGATTTCCGTTATGGATTTCGATAATAAACATTCACCAGGCGAATGCAGGGCTATGTGGAATGTCTATCTGCATCCTGCTTTCAAGAAAAGTGAATGGACAAATGTAGAAGATAAGAAACTGCTGAAATGTATTAGAGAATATAAATATCAAGATTGGGATGCTATTGCGCAAAAATTAGACACAAACCGTAGCGCGTATCAATGTTTTATCAGATATAATACTATCAAAAAAGTACCGTTAGCTGGACAACCATGGACCAGGCAGGAGGACAAAcatcttacaaaaattataaacgcAATCAAGATCGGAGACTATATTTCTTGGTCCGATGTTGCTAATCATTTTCGGCACAGAACCAAGCAACAAATTTACGTACGATGGATGTATAGGAAAGCTCCGCATTTGAGAAAAGGTAGATTCACTCATCAGGAAACATTAACTCTTCTGAAAGCGGTGCAGAAGTATGGCACGGACTTCTGTAAAATTTCAACCATCGTAATGTCACATCGAACTTCGGTACAACTTCAAGAGCGTTACCATACGGTGGTGTCCAATATCAATAATCGGTACAATGTTTGGACGCTCAATGATGATatgatgttaattaatttacagtTGCAATACAGTAACGATTGGTCCAAAATAGCCAAGTATTTTTCTGATAAGACAAGAACACAAGTAAGACACCGATATAACGCATTACTAAGATATACAGCAAAAGGTGTCAGTCTTGAAACTATACCTAGACCGCCTCCTACAATTctcaataaaagaaattttattaataaaaaatcatcatcTAATAAAGCACCAAAAAGacatattaaaaatgcaatatttgaTATGCAACctgttgtaaatatttttgatgttCAGTTAAGATTATATGAAGCTCTTTGTTTTCCACTTTCAATTAAACCTAATAATTCTGAAGAACTTTACAGCATTGAACAGCTTATACGTGATACTAAAAAATTACACAgcacattaaatttattacatgcCAATCTTGATATTCCAGATGATTTTCTGAATTATGTGCAGTTGAATAACAAAGAGAAACAACTTTTGATTTCTTTAAaggaatatttaaacataagaCATGTACAGAGTAATGAACtgatagaaaaatatagtaCACGAATGTTCGGTTGTGCCCCAGAAATTAATAAAGGTGATTTTTTTATACCACCACTTCCATTTGATGGACATGTaaagctgagaaaaataattaaaaataaaaaaaacacatctataaactataatttagccgttaatgaaaaatttcttattgatGTACCTGCAGATTTCTCTATAACTCCCTCCGTATTTCCTTTGGTTAAAATTGAGGAAGAAATTCAGTTTCACAAATTTGGTCAGTTCTTAACAAGTGATTACCACAATTTTTTAGAgcaaaatttagatttatataaatcaataaaatgtatcttttcTTTTGCTAAAAAAACACAGATGTCAAAAGAAACTTTATTAGAACACAATAAACTGAATGTGAATTCAGAAATAAGTTCGGAAGATTGCGAACAAGTGGAATTAAATAAGTTAAAGAAAACTGATAAATCAGAAATAAGTTTGGAAGCTTACGAACAATCGAAATTAAACAAGTTTAACAAGGAAACTACTAATGTCAAAGAAGACGTTGAAGATGTAAATATGGGTAATATAATTTCGCCAAATCAAGCAACTTTAATAggtataaagaatttatttctttgGAAATTATTGTACGATTATCAACACGAATCTCATCTACGATATGAATTGATGGCATCATTTGGAAATGAATCAAAATCAGAACATACTGCGACAAATTCTAAATTTATGGAAATTGAGAGCGCCGAATATCAGCTGCTGCGAGTTCGTCTACGGCAATTATTTGAACTTCCTATAGGTTTGTCGAACACTATACTGGAAGTGCAAGGGCCAgaagcaatatttttaaaagataagcCGACTCGTCgaattatttcaacaaaaagAAAGTTTGAAGACGATAGTGAAGAtgaaaatacagaaataaatcCTTTGGAActaaatgaaagaaataattcaaacgtttcgactgATAGTAATTCTCAACTCAACTTGGACATTGCATTGACAAACCTTCCTAGAGTACGTAGCTGTAAAAtagttaagaaaaaatataaaatcactaGAAAATAA
- Protein Sequence
- MSEFDDLELLDIQADIQALDEVLALSAKKKSQQHVSSNQQSDVSSNVDAEDDDDYVNYLQANQEIEKSLNAYEINTRLISGLTIAKKKLTDLLEECEQKIRLLDEKLKKSTDESSSNSKLAISNAGIPYFKDKDYFSAPKNIDTKRKEAVGEVFLLNLKKPNRWSGKDREMLLSAINNQAIESVLSGGFNKEINKPTSDNQTKKIKLVLPRNFNEMVGPLGAREFDWHKISVMDFDNKHSPGECRAMWNVYLHPAFKKSEWTNVEDKKLLKCIREYKYQDWDAIAQKLDTNRSAYQCFIRYNTIKKVPLAGQPWTRQEDKHLTKIINAIKIGDYISWSDVANHFRHRTKQQIYVRWMYRKAPHLRKGRFTHQETLTLLKAVQKYGTDFCKISTIVMSHRTSVQLQERYHTVVSNINNRYNVWTLNDDMMLINLQLQYSNDWSKIAKYFSDKTRTQVRHRYNALLRYTAKGVSLETIPRPPPTILNKRNFINKKSSSNKAPKRHIKNAIFDMQPVVNIFDVQLRLYEALCFPLSIKPNNSEELYSIEQLIRDTKKLHSTLNLLHANLDIPDDFLNYVQLNNKEKQLLISLKEYLNIRHVQSNELIEKYSTRMFGCAPEINKGDFFIPPLPFDGHVKLRKIIKNKKNTSINYNLAVNEKFLIDVPADFSITPSVFPLVKIEEEIQFHKFGQFLTSDYHNFLEQNLDLYKSIKCIFSFAKKTQMSKETLLEHNKLNVNSEISSEDCEQVELNKLKKTDKSEISLEAYEQSKLNKFNKETTNVKEDVEDVNMGNIISPNQATLIGIKNLFLWKLLYDYQHESHLRYELMASFGNESKSEHTATNSKFMEIESAEYQLLRVRLRQLFELPIGLSNTILEVQGPEAIFLKDKPTRRIISTKRKFEDDSEDENTEINPLELNERNNSNVSTDSNSQLNLDIALTNLPRVRSCKIVKKKYKITRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00015969;
- 90% Identity
- iTF_00015305;
- 80% Identity
- -