Basic Information

Insect: Acromyrmex charruanus
Gene Symbol: -
Assembly: GCA_017607545.1
Location: JAANIC010006835.1:905183-910229[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.015 0.77 9.4 3.1 1 23 365 387 365 387 0.97

2 19 0.00062 0.032 13.7 0.6 2 23 424 445 423 445 0.97

3 19 4.1e-05 0.0021 17.4 1.8 1 23 512 534 512 534 0.98

4 19 0.00026 0.013 14.9 1.3 1 23 537 559 537 559 0.98

5 19 1.9e-06 9.9e-05 21.6 1.5 2 23 606 628 605 628 0.97

6 19 0.017 0.9 9.2 2.9 1 23 634 656 634 656 0.96

7 19 0.003 0.16 11.6 0.7 1 20 662 681 662 686 0.93

8 19 0.001 0.054 13.0 2.1 1 23 753 775 753 775 0.97

9 19 0.00029 0.015 14.8 4.7 1 23 829 851 829 851 0.97

10 19 0.00034 0.018 14.6 0.6 1 20 856 875 856 877 0.94

11 19 0.036 1.9 8.2 0.3 2 23 888 909 888 909 0.97

12 19 2.2e-05 0.0011 18.3 0.6 2 23 948 969 947 969 0.97

13 19 1.9e-05 0.00099 18.5 1.5 1 23 974 996 974 996 0.95

14 19 0.00086 0.044 13.3 1.7 1 20 1002 1021 1002 1024 0.93

15 19 5.9e-06 0.00031 20.1 0.5 1 23 1040 1062 1040 1062 0.95

16 19 2.9e-07 1.5e-05 24.2 0.6 1 23 1068 1090 1068 1090 0.99

17 19 3.1e-05 0.0016 17.8 0.2 1 23 1096 1118 1096 1118 0.97

18 19 0.018 0.96 9.1 6.9 1 23 1124 1146 1124 1146 0.96

19 19 0.0039 0.2 11.2 0.6 1 20 1152 1171 1152 1173 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.015	0.77	9.4	3.1	1	23	365	387	365	387	0.97
2	19	0.00062	0.032	13.7	0.6	2	23	424	445	423	445	0.97
3	19	4.1e-05	0.0021	17.4	1.8	1	23	512	534	512	534	0.98
4	19	0.00026	0.013	14.9	1.3	1	23	537	559	537	559	0.98
5	19	1.9e-06	9.9e-05	21.6	1.5	2	23	606	628	605	628	0.97
6	19	0.017	0.9	9.2	2.9	1	23	634	656	634	656	0.96
7	19	0.003	0.16	11.6	0.7	1	20	662	681	662	686	0.93
8	19	0.001	0.054	13.0	2.1	1	23	753	775	753	775	0.97
9	19	0.00029	0.015	14.8	4.7	1	23	829	851	829	851	0.97
10	19	0.00034	0.018	14.6	0.6	1	20	856	875	856	877	0.94
11	19	0.036	1.9	8.2	0.3	2	23	888	909	888	909	0.97
12	19	2.2e-05	0.0011	18.3	0.6	2	23	948	969	947	969	0.97
13	19	1.9e-05	0.00099	18.5	1.5	1	23	974	996	974	996	0.95
14	19	0.00086	0.044	13.3	1.7	1	20	1002	1021	1002	1024	0.93
15	19	5.9e-06	0.00031	20.1	0.5	1	23	1040	1062	1040	1062	0.95
16	19	2.9e-07	1.5e-05	24.2	0.6	1	23	1068	1090	1068	1090	0.99
17	19	3.1e-05	0.0016	17.8	0.2	1	23	1096	1118	1096	1118	0.97
18	19	0.018	0.96	9.1	6.9	1	23	1124	1146	1124	1146	0.96
19	19	0.0039	0.2	11.2	0.6	1	20	1152	1171	1152	1173	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGCGATACATACGTCGGATCCGCCGCAGAGCGAGGACGCGATCACGTCCGCTATGAAGATATGCCGCATCTGCCTGCTCGACAATCTGATGATGCGCGATCTCTTCGCAGAGAGCGAGGTCGCGTCCCTATCGGTGAAGGCAATGAGCTTCGCCAACGTTAAGATGTTACCAGGTGATGGTTTACCAACACAGGTGTGCTGTATGTGCGCCGACAAGTTGGAATCGGCATATGAGTTTAAGTTACAAGTGGAGCAAGCTGACAATGTTCTTCGAGAAAAGCTTGTGGGAGGAATAATAAAGGACGAATTGTTTCTTAATGAGGTTGAAATACACTTGGATGCCGAGAAAAATAATGGTTTGGAAGAGATGAATGACAGTGCTGATTATGAATCTCCTGGTACATTGCCAGTTGAAACAGAAACTGACAAGAACTTtctgaaaaatcaattaattattttggaagCTGAAAAATTGGCAGAGACAGATGGAATACAACAAGATTCAGAACAAGATAACTTGCAAGAAAGCATTGAGGAAGAATTGCAGCAAGAATTAGCCAGCTCAGAAGACATGTCAGATGCTATTGATGAATCTAGGGATGAAATATCTTCCAACGACAAGAATATTATTCGAAGTTGCACAGATACAATTCCAACAGatgaacataattatataatgcagCAACAGTGTATTATTTTGCATACTGAACAATTCTCCttccataaaaaaatgcaGGAGACCGCTGAACAAAATCAAGAAATTCCAACTCAGCAAATCCACGAGACTCTGGCTGAGCAAATTGAAGAGACTCCAGTTCAAAATGCTCAAGCTGAACAGGAGAATCAAACTgaacaaaatcaaaataaaaaaatggaattattacAGAacgaagtattaaaaaatgatactaaTGAGCCAGTCGTGGAAGAATCACCCCAGAATGAAACTAGAAGAAGTAAACGTAGATTGGCTCGTCGGACATTCACCGAGCGAAATTCCGATGAggagaattattttgaaaatctgaatctcAGTTCACGATTGAAAAAAGTGCAGGCAGATAAGACAGAGAAGATCTTTTTCATGTGTTACTTGTGCGATAAACAGTTTCTTTCAAAGAGCGTCTTGAAAGAGCATATGCATTCCCATGAAGAAGTAAGGAAAACATTGTCTCTGAAAAAAACGCCGGAGAAACCGCAGAAAGTGCAGACCAGCGTTTCCGCTGTGAAAACGCCGGAATCAGGAAGGAAAGCCAACAAGTGCCCTTATTGTGGTAAAgagtatatgtacataatctCGTTTACTAAACACATTAAGCAACACGAGCGAGAGGGGCAGGAAGCGAAGGAAGATTCGATGTCGTTTGAGATGTTTCATGAGGATGAGTACAGTCTAGACTTAGATAATGGCAACAAATCGGATGTTGAATGTAGAAAACAAAAGAGAGGAAGTATAGTATACGACGATGTTGCAAGCGACAATGATCAGGATAAGAAAAGAAAGCGTAGTCTTATTGAGGAGTTTACGTGTAACAAATGTCCAGAAAAATTCGATACAAAGCGAGGTTTGCAAAAGCATTCGCTCACGCATGTTAGCTTCAAGTGCAGCGTGTGCAACGAGGAATACGACACTCTAGAACAACTAAAAAATCACCGAACAAAGCATGTGGTCGAAGGCGTACTTACTGAGCAAGACTTGGAAGAAGATATGAAGCAAATGATCAAATGCGAGGAGAATGATGACAATAGTAAGAACATCAAAGATGGAGAGAACAGTGAATCCGCCGAAATCACGAAGGAACTAAAGTGTTCGATATGTTCAATAACATTCTCACGCAAGAAAGCGCTCTCCAGACACATGCAGACAACACACTCCGACACCCATTCTTACGAATGCAAGATATGCTGTCAACAATTTGCACGGAAGGATTTCCTACGCAGGCATGCCGAGCAGCATGCACGAGTGAAGACTTACAAATGTACTCAATGTAACAAAACTTTCGGCAATGAGCTCACGATGAGAAATCACCTGGTTGCCACAAATCACAAGACATTTATACAGGGACAGGAATACGATCCCAATAAGCGTATAAAACGCGTGGCGGCGAGAGCAGCACAGAAGATCATCGACAAGATCAAGACTGAGGACGGTCTCGAAGATTACGATGATAATACCGATTATGATGTTAAATTGGACAAGCATTATGTTATTAAGCACGACGCAAAGAAGTACAGGTATAAAGAATTTGAGTGCGCGACCTGTAATAAGAAGTACTGCTTGAAACAAGCATTGGCGAGGCATATGGAGCAACATGTAAAGAAGGAAAAGGCAGAGAAGACAATGGAGAAAGCGGCGGAGAAGCAGAAGAAGACCGCTTTAGAGAAGAAAGAAGCGCAGAAGAGCAACACGGATGATAACGATGGCGATAACAACTCCGACTTTGAAAGTGGTCTCGACTGGCCAGTAGACAGTCATGAATGCACCACGTGCAAGAAGCAATACAGTACGAAGAAGTCGTTACTGCGCCATCAACTACTACATGAGGAGCCAAATTTCGAGTGCGATATCTGCAGTATCAAGTTCTATCGAAAAGACAAACTGAAGGCGCACTACGATAAGTGCGCGGAAAAGAATCCTGATCAGGTGAGGAAGTGCAACATCTGCGGCGACAGTTTCGAAAACAATGAGATTCTGCGCGAGCACAGGGCCAAGCACGTTACCGAGGGTATCCTAACGGAGGAGGATCTGAGAGACACCGAGCCAAAATCCGAAGAAAAGAGactaaatgataaaatgactCGGAAGAGGAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAATATACCTCTAGGAAGGGTCTGCTGCGACACATTCAGGTTCACGAGGGCAAGAAGTATCTATGCGAAATATGTCCAAAGAAATTCTATCGGCGGGAACACCTGAAGATTCACGTGGCAAAACACAACATGATCAAACCATACAAGTGCACTCGTTGCTCCAAACGGTTCATTAAGGAGGAGCAGCTCAATAACCATCTACCTAAGCATGATCGCACTTTTAAGAAGAACAAGGAGACCGATAGCTCAAAGAGATTCCTCTGTGAGATCTGTAGCAAGAGCTTTACGCAGTCAACAACGCTGCTAGCGCATCTGCGTGCTCATAAGGGTATCAAACCGTATGTGTGCGAAGTATGCTCCAGGCCATTCACCACTAATGCCTACTTGAAGATGCATATGCGCACGCACACGCAGGAACGTCCGTACATCTGCCAATATTGTTCGCGAGCGTTTGCCCGTGCCGACACCTTGGCAAATCATCTGACATCGCATACTGGCGAAGCCAAGTACCACTGCAAGTGCTGTCCAAAGAACTTCCGGCGATTGAAATCATTGAAGGAACATATGTTTATTCATACGGGTCAACGACCTTACGAGTGTCCAACTTGCGACAGAAAGTTTAACAATAACGGCAGTCGCTACGCGCACAGCAAGCGCTGCAAACAGAATCTTTTGCAGGATCAGAACCGGGCGCAACAGGTGATTCAGCAGAcacagcagcaacagcaacaacaacagcTACAACATCAACATCAACATCAGCCACAGCAAGTGCAAATACAGATGCAGCCAGAACCGCATCCAGTTAGGTTGCATCAAACCACGATCGGCCAGGCACAAGTAATCAAGGCGCAAAACATTAAAACAATCGCTATAGCGAGACAAGCTGAGCCTACGGTAACTACGCAACATCAGGTTATGCAGCATCAAGAAATACTAATGCCTTTAATCCTGCCACTTACCGTCACTCTTGCTGATGTAGGCGAAGAGGTGATACTACCTGAAGGTACAAAAATATTCACCACTTCT
Protein Sequence: MDAVAIHTSDPPQSEDAITSAMKICRICLLDNLMMRDLFAESEVASLSVKAMSFANVKMLPGDGLPTQVCCMCADKLESAYEFKLQVEQADNVLREKLVGGIIKDELFLNEVEIHLDAEKNNGLEEMNDSADYESPGTLPVETETDKNFLKNQLIILEAEKLAETDGIQQDSEQDNLQESIEEELQQELASSEDMSDAIDESRDEISSNDKNIIRSCTDTIPTDEHNYIMQQQCIILHTEQFSFHKKMQETAEQNQEIPTQQIHETLAEQIEETPVQNAQAEQENQTEQNQNKKMELLQNEVLKNDTNEPVVEESPQNETRRSKRRLARRTFTERNSDEENYFENLNLSSRLKKVQADKTEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKPQKVQTSVSAVKTPESGRKANKCPYCGKEYMYIISFTKHIKQHEREGQEAKEDSMSFEMFHEDEYSLDLDNGNKSDVECRKQKRGSIVYDDVASDNDQDKKRKRSLIEEFTCNKCPEKFDTKRGLQKHSLTHVSFKCSVCNEEYDTLEQLKNHRTKHVVEGVLTEQDLEEDMKQMIKCEENDDNSKNIKDGENSESAEITKELKCSICSITFSRKKALSRHMQTTHSDTHSYECKICCQQFARKDFLRRHAEQHARVKTYKCTQCNKTFGNELTMRNHLVATNHKTFIQGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDNTDYDVKLDKHYVIKHDAKKYRYKEFECATCNKKYCLKQALARHMEQHVKKEKAEKTMEKAAEKQKKTALEKKEAQKSNTDDNDGDNNSDFESGLDWPVDSHECTTCKKQYSTKKSLLRHQLLHEEPNFECDICSIKFYRKDKLKAHYDKCAEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDTEPKSEEKRLNDKMTRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCEICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFIKEEQLNNHLPKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLLAHLRAHKGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQDQNRAQQVIQQTQQQQQQQQLQHQHQHQPQQVQIQMQPEPHPVRLHQTTIGQAQVIKAQNIKTIAIARQAEPTVTTQHQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00016834;
90% Identity: iTF_00016834; iTF_01476421; iTF_01477791; iTF_00182122; iTF_00182761; iTF_00181465; iTF_01477074;
80% Identity: -