Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: -
Assembly: GCA_001594055.1
Location: NW:42176-47558[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.014 0.95 9.4 3.1 1 23 389 411 389 411 0.97

2 19 0.012 0.78 9.6 0.5 2 23 448 469 447 469 0.96

3 19 9.6e-05 0.0063 16.2 0.8 1 23 536 558 536 558 0.97

4 19 0.00023 0.015 15.0 2.0 1 23 561 583 561 583 0.98

5 19 8.4e-06 0.00055 19.5 1.7 2 23 631 653 630 653 0.96

6 19 0.0025 0.16 11.8 3.1 1 23 659 681 659 681 0.96

7 19 0.00047 0.031 14.0 0.7 1 20 687 706 687 711 0.94

8 19 9.8e-06 0.00064 19.3 1.2 1 23 785 807 785 807 0.97

9 19 0.00029 0.019 14.7 4.7 1 23 862 884 862 884 0.97

10 19 0.00021 0.014 15.1 0.7 1 20 889 908 889 910 0.94

11 19 0.035 2.3 8.1 0.3 2 23 921 942 921 942 0.97

12 19 2.1e-05 0.0014 18.3 0.6 2 23 981 1002 980 1002 0.97

13 19 1.9e-05 0.0012 18.4 1.5 1 23 1007 1029 1007 1029 0.95

14 19 0.00083 0.055 13.3 1.7 1 20 1035 1054 1035 1057 0.93

15 19 5.8e-06 0.00038 20.0 0.5 1 23 1073 1095 1073 1095 0.95

16 19 2.8e-07 1.8e-05 24.2 0.6 1 23 1101 1123 1101 1123 0.99

17 19 3e-05 0.002 17.8 0.2 1 23 1129 1151 1129 1151 0.97

18 19 0.018 1.2 9.1 6.9 1 23 1157 1179 1157 1179 0.96

19 19 0.0038 0.25 11.2 0.6 1 20 1185 1204 1185 1206 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.014	0.95	9.4	3.1	1	23	389	411	389	411	0.97
2	19	0.012	0.78	9.6	0.5	2	23	448	469	447	469	0.96
3	19	9.6e-05	0.0063	16.2	0.8	1	23	536	558	536	558	0.97
4	19	0.00023	0.015	15.0	2.0	1	23	561	583	561	583	0.98
5	19	8.4e-06	0.00055	19.5	1.7	2	23	631	653	630	653	0.96
6	19	0.0025	0.16	11.8	3.1	1	23	659	681	659	681	0.96
7	19	0.00047	0.031	14.0	0.7	1	20	687	706	687	711	0.94
8	19	9.8e-06	0.00064	19.3	1.2	1	23	785	807	785	807	0.97
9	19	0.00029	0.019	14.7	4.7	1	23	862	884	862	884	0.97
10	19	0.00021	0.014	15.1	0.7	1	20	889	908	889	910	0.94
11	19	0.035	2.3	8.1	0.3	2	23	921	942	921	942	0.97
12	19	2.1e-05	0.0014	18.3	0.6	2	23	981	1002	980	1002	0.97
13	19	1.9e-05	0.0012	18.4	1.5	1	23	1007	1029	1007	1029	0.95
14	19	0.00083	0.055	13.3	1.7	1	20	1035	1054	1035	1057	0.93
15	19	5.8e-06	0.00038	20.0	0.5	1	23	1073	1095	1073	1095	0.95
16	19	2.8e-07	1.8e-05	24.2	0.6	1	23	1101	1123	1101	1123	0.99
17	19	3e-05	0.002	17.8	0.2	1	23	1129	1151	1129	1151	0.97
18	19	0.018	1.2	9.1	6.9	1	23	1157	1179	1157	1179	0.96
19	19	0.0038	0.25	11.2	0.6	1	20	1185	1204	1185	1206	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGCAATACATACGTCGGATCCACCGCAGGGCGAGGACGCGATCGTGTCCGCTATGAAGATATGCCGCGTCTGCCTGCTCGACAATCTGATGATGCGCGATCTCTTCGCAGAGAGCGAGGTCGCGTCCCTATCGGCGAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTTTACCAGCACAGGTATGCTGTATGTGCGCCGATAAGTTGGAGTCGGCATACGAATTTAAGTTACAAGTGGAACAAGCTGACAATGTTCTTCGAGAAAGGCTCGTAGGAGGAATAATAAAGGACGAATTGTTTCTTAATGAGGTTGAAATACACTTGGATGCCGAAAAGAATAATGATTTGGAAGAGATGAATGACAGTGCTGATTATGAATCTACTGACACATTGCCAGTTGAAACGGAAACTGACAAGAACTTTCTGAAACGTCAATTAATGATTTTGGAAGCTGAAAAATTGGCAGAGACAGATGGTATGCAACAAGATCCAGAACAAGATAACTTGCAAGAAAGCATTGAGGAAGAATTGCAGCAAGAATTAGCCAGCTCGGAAGACAATGATATGTCAGATGCTATCGATGAATCTAGGGATGAAGTACCTCCCaacgacaaaaatattattcgaagTTGCATAGATGCAGTTCCAACGGAggaacataattatataatgcagCAACagtgtattatattacatactgAACAATTCTCCTtccataaaaaaatgcaagagAGTGTACCAGAATTTAAACACGACATAACGAAATACAAAGAGTCACTATCTGAacaaaatcaagaaaatcTGTCTGAGCAAAACGAAGAGATTCAGACTGAACAAAACGAAGAAATTCCAACTCAGCAAATCCACGAGATTCTGGCTGAGCAAACTGAAGAGATTCCAGTTCAAAATGCTCAAGCTGaacaaaatcaaaatgataaaatggaattattacAGAAAGATTATACTAACGAGCCAGTGGTGGAACAAGAATCATCCCAGAATGAAACTAGAAGAAGTAAACGTAGATTAGCTCGTCGAACACTCACCGAGCGGGATTCCGATGAGGAGAATTACTTTGAAAATCTGAATCTCAGTTCACGATTGAAAAAAGCGCAGGCAGATAAGACAGAGAAGATCTTTTTCATGTGTTACTTGTGCGATAAACAGTTTCTTTCAAAGAGCGTCCTGAAAGAGCATATGCATTCCCATGAAGAAGTAAGGAAAACATTGTCTCTGAAGAAAACGCCGGAGAAACCGCAGAAGGTGCAGACTAGCGTTTCCGCCGTGAAAACGCCGCCATCGGGAAAAAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTACCTGTACATAATCTCGTTTACTAAACATATTAAGCAACACGAGCGAGAGCGGCAGGAAGCGAAGGAAGATCCGATGCCGCTCGAGATATCGTTTCATGAGGATGAGCACAGTTTAGACTTTGATAACGGCAACAAATTGGATGTTGAATGTAGAAAACGAAAGAGAGGAAGTATAGCCCACGACGTCGCGAGCGACAATGATCAGGATAAGAGAAAAAGGCGTAGTTTTATTGAGGAGTTTGCGTGTGACAAATGTCCAGAAAAATTCGATACAAAGCGGGGCTTGCAAAAGCATTCGCTCACGCATGTTAGCTTCAAGTGCAGCGTGTGCAATGAGAAATACGACACTCTAGAACAACTAAAAAATCACCGAACGAAGCACGTGGTCGAAGGCGTACTCACCGAGCAAGACTTGGAAGAGGACATGAAGCAAATGACCAAGAGCGAGGAGAATGATGACAACAGCAAGAACATCAAAGATGAAGAGAACAACAGTGAATCCGCCGAAATCACGAAGGAACTAAAGTGTCCGACGTGTTCAATGACATTCTCACGCAAGAAAACGCTCTCTAGACACATAGAAACAACACACTCCGACACCTATTCTTACGAATGCAAGATATGCTGTCAACAATTTACACGGAAGGATCTCCTACGCAGGCATGCCGAGCAGCATGCACGAGTGAAGACTTACAAATGTACCCAATGTAACAAGACCTTCGGCAACGAGCTCACGTTGAGAAATCACCTGGTTGCCACAAATCACAAGACATTTATACAAGGGCAGGAATACGATCCCAACAAGCGTATAAAGCGCGTGGCGGCGAGAGCAGCACAGAAGATCATTGACAAGATCAAGACTGAGGACGGTCTCGAAGATTACGACGATGATAACGATGATAATACCGATTACGATGCCAAATTGGACGGGCATTATCGCCGTAAGCGCGACGCTACACCAAAGAAGTACAGTTATAAGAAGGAATTTGAGTGCGCAACCTGTAACAAGAGGTACAGCTCGAAGCAAGCGTTGACGAGGCACATGGAGCAGCATGTAAAGGAAGAGAAAGCAGAGAATGCAGTGGAGAAGGTGGTGGAGAAGCAGAAGAAGACCGTTTTGGAGAAGAAGGAAGCGCAGAAGAGCAACACGGGCGATAACGATGACGACGATAACAACTCCGACTTTGAAAGTGGTCTCGACTGGCCAGTAGACAGCCATGAATGCACCACGTGCAAGAAGCAATACAGTACGAAGAAGTCGTTACTGCGTCATCAACTACTACATGAGGAGCCAAATTTTGAGTGCGATATCTGCAACGTCAAGTTTTATCGCAAAGACAAACTGAAGGCGCACTACGATAAGTGCTCGGAAAAGAATCCCGATCAGGTGAGGAAGTGCAACATTTGCGGCGACAGTTTCGAAAACAATGAGATTCTGCGCGAGCACAGGGCCAAGCACGTCACCGAGGGTATCCTAACGGAGGAGGATCTGAGAGACACTGAGCCAAAATCCGAAGAAAAGAAactaaatgataaaatgacCCGGAAGAGAAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAATATACCTCTAGGAAGGGTCTGCTGCGACACATTCAGGTTCACGAGGGCAAGAAGTACTTGTGCGAAATATGCCCAAAGAAATTCTATCGACGGGAACACCTGAAGATTCATGTAGCAAAACACAACATGATCAAACCATACAAGTGCACTCGCTGCTCCAAGCGCTTTATCAAAGAGGAACAGCTCAACAACCACCTACCTAAGCATGATCGCACTTTTAAGAAGACCAAGGAGACCGACAGCTCGAAGAGATTCCTCTGTGAGATCTGCAGCAAGAGCTTTACGCAATCGACAACGTTGTTAGCGCATCTGCGCGCTCATAACGGTATCAAACCGTATGTGTGCGAAGTATGCTCCAGGCCATTCACCACTAATGCCTACTTGAAGATGCATATGCGCACGCACACGCAGGAACGTCCGTACATCTGCCAATATTGTTCGCGAGCGTTTGCCCGTGCCGACACCTTGGCGAATCACCTGACGTCACACACTGGCGAAGCCAAGTATCACTGCAAGTGCTGTCCGAAGAATTTCCGACGATTGAAATCATTGAAGGAGCATATGTTTATTCATACGGGTCAACGACCTTACGAGTGTCCAACTTGCGACAGAAAGTTCAACAATAACGGCAGTCGCTACGCACACAGCAAGCGCTGCAAACAGGCTCATTTGCAGAATCAGAACCGGGCGCAACAGGTGATCCAGCAGacacaacagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacatcAGCCACAGCAAGTGCAAATACAGATGCAGCAGTCAGAACCGCATCCAGTTAGGTTGCATCAAACCACGATCGGCCAGGCACAATTAATTAAGGCGCAAAACATCAAAACAATCGCTATAGCGAGACAAGCTGAGCCTACGGTAGCCACGGCGCAACAAGTTATGCAGCATCAGGAGATACTAATGCCTCTAATTCTGCCACTTACCGTCACTCTTGCTGATGTAGGCGAAGAGGTGATACTACCTGAAGGTACAAAAATATTCACCACCTCTTAA
Protein Sequence: MDAVAIHTSDPPQGEDAIVSAMKICRVCLLDNLMMRDLFAESEVASLSAKAMSFANVKMLPGDGLPAQVCCMCADKLESAYEFKLQVEQADNVLRERLVGGIIKDELFLNEVEIHLDAEKNNDLEEMNDSADYESTDTLPVETETDKNFLKRQLMILEAEKLAETDGMQQDPEQDNLQESIEEELQQELASSEDNDMSDAIDESRDEVPPNDKNIIRSCIDAVPTEEHNYIMQQQCIILHTEQFSFHKKMQESVPEFKHDITKYKESLSEQNQENLSEQNEEIQTEQNEEIPTQQIHEILAEQTEEIPVQNAQAEQNQNDKMELLQKDYTNEPVVEQESSQNETRRSKRRLARRTLTERDSDEENYFENLNLSSRLKKAQADKTEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKPQKVQTSVSAVKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHERERQEAKEDPMPLEISFHEDEHSLDFDNGNKLDVECRKRKRGSIAHDVASDNDQDKRKRRSFIEEFACDKCPEKFDTKRGLQKHSLTHVSFKCSVCNEKYDTLEQLKNHRTKHVVEGVLTEQDLEEDMKQMTKSEENDDNSKNIKDEENNSESAEITKELKCPTCSMTFSRKKTLSRHIETTHSDTYSYECKICCQQFTRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFIQGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDDNDDNTDYDAKLDGHYRRKRDATPKKYSYKKEFECATCNKRYSSKQALTRHMEQHVKEEKAENAVEKVVEKQKKTVLEKKEAQKSNTGDNDDDDNNSDFESGLDWPVDSHECTTCKKQYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDTEPKSEEKKLNDKMTRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCEICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFIKEEQLNNHLPKHDRTFKKTKETDSSKRFLCEICSKSFTQSTTLLAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQAHLQNQNRAQQVIQQTQQQQQQQQQQQQQQQQQQQQQHQPQQVQIQMQQSEPHPVRLHQTTIGQAQLIKAQNIKTIAIARQAEPTVATAQQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00016834;
90% Identity: iTF_00014886;
80% Identity: -