Basic Information

Gene Symbol
ct
Assembly
GCA_031841125.1
Location
CM063113.1:44901322-44928900[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-27 3.1e-23 82.6 0.0 3 72 410 480 408 485 0.95
2 3 2.1e-31 3.9e-27 95.1 0.1 3 77 818 893 816 895 0.96
3 3 1.1e-31 2e-27 96.0 0.1 3 76 1031 1105 1029 1108 0.96

Sequence Information

Coding Sequence
ATGTTTCTTCTGTTTCAGATCTCACAACTAGTAGAAGACGTTCATAAGCTTCAAACGAGTATAGGTAAACTGCAAGAAACGACGGCCAATCAAATTGCCAGATTAGAAGAGGAACTAAGTCATAGGAGACAGCACATACTGCGTTTGGAGGCCAGACTAGAAACGCAGAAAGACTACGAGGACATCAAACGGCAACTATGCATTTACAAGTCTGATAATAAACTGATCGAGAATATCGAAAACAACAACGTCTCGACGACAAGCACCACTACCAACACTACCACAGCCAGCACTACCACCGACTCGGAACCGCTGTCCGATCGCGTCAAAAGCGAACCATTCACTCAAAAGCGCAATCAAAGCATATCACCTTCCGAATCACAAAGTGATCTGGTGCGCGCGCCCAGTCGTTCCTCCGAGCCGACTTTCTCCTTCCCCACGAGCGGATCGGCGCCGCCCGGTCTGCAGAACGTTGAACAGTTCGGTTCCTTCCTCGGTGAAGAGATCGTCGCCAACTGGAGACGGTCTCTAGAGCGTACCATTATTAGTCAATCATCTTCCACGTCGCCGCCCAACGTGACCGCGGCCACGCTCTCGCTACCAGCTAGTAAACCGTTTCAGCTACCACCGTCGCCTACGAACACCTCACCCGCTCCTCATTCGCCGCGCGACACCGAGTCACACAAAACCGATTACTCGCACGATGCTCAAGAATCTTCAGAGGAAATTGGTCAATCAAAGTCAACGCGAACCCACAGCGAGCACTCGGATAAAGAGGGTCCGACGGAGACGCCGATCTCGCGCAACGACACCCCCAAATCGCTGGCGGACGCCGACTCGCCGGCGCCGTCGCTGGAGCACCATAGTCACCGCGGCGACGGCATGACGCCGTGCAAGTCGCCGGCCAGCAGCAGCGACCCGGAGCTGATATCGAACAACAATTCGCCGCACCTGAACAACAATaccagcagcagcaacaacaacataCCGCCCGGCCTGATCAACGGACTGTGCGGCATCAACATGGGCCTGAACAACAACCTGCCGATGAATTTCGACATGCTGAAGTCGCAGTTCCGGTTCGACGATCCGCGTTCGCCGTTTCGCTTCGGCGACGATCCGGGCTCGATCGTCGGCCGGTACGGCGAATCGCTGATACCGAAAGGCGACCCGATGGAGGCGCGGCTGCAGGAGATGCTGCGGTACAACATGGACAAGTACTCGACGCAGAATCTGGACACGCTGCACATAGCGCGGCGGGTGCGCGAGCTGCTGTCCATCCACAACGTGGGCCAGCGGCTGTTCGCCAAGTACGTGCTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTGTCCAAGCCGAAGCCGTGGGACAAGCTTACCGAGAAGGGCCGTGACAGCTATAGGAAGATGCACGCGTGGGCGTGCGACGAGAACGCCATCTTGCTGCTGAAGTCGCTGATCCCGAAAAAAGGTAAAGATCCTGGCATGCCGACTGTATTCACGCGCGGAGACTCCGATATGACTGAAGAACGCATCGCGCATATCCTGAGCGAAGCCAGCCACCTGATGAAATCCTCATCACATAGTCAAGACCAGGAAACGCGCAGCAACGAAGATAGTAAATCACCAAATCGCGGACAGTGTGCTTCGCCAGTCAGTCGAGATGGCTTCTCGAGTAGAAAACTAAAGAAATACGAACACGACGACGTTTCGCACGACCAGGTGCTGAGAATATATCAAGAGGAGCTGGCCAAGCTGATGGGTCGTGACCATGCCTTCCCTGGATTCATGTTTCCTCCGTTCTTCGGCGCCAACGGCGGTCCCGGCGCCGCCAGCAGCGAAGACATTCGTATGTCGTTAGACGCGTACAATCGCGAGCTAGCCAAGTTGCAGAACTGCCCGCAAAGTCAAATCAGTCAAAATATGTCCGGTCTGTTGGGTCTGCATCCGCAGCCCGccaacaataacaacaataGTTCGGCCAACACCGGCAACGGCGGCGGAGTTGGCGCGAACGCCGGCAGTGGCGGCCAGCCACCGGTCAGCAATGGCGTCATCCAAGACCTGTCGTTACCGAAGGCCGAACGCAAGTCAGACGTTAAACTACCCAACGGCGACCTGAGTAACGATAAGCCGGAGTTCAAAAAGGAATCGGTGCCCACTTCGGAGTCGTTTTCGGAGGCGATGAAGCACGCTGGCAGCGCGTTTTCTCTGGTCAGGCCAAAGACTGAGCCAGGTTCAACGTCAGCCAGCAGCTCGCCGCTAGGCAATTCGATTCTACCACCTGAAGATTTCTCACCGTCGGCGTCCGTCAGTCCGCTACAGAGGATGGCGTCGATAACCAATTCGTTGATCTCACAACCACCGACTCCGCACCATCACTCGCCGTCGCAACGCCCCTTGAAAGCGGTGCTGCCGCCCATCACTCAGCAGCAGTTCGATCAGTTTAATAATCTGAATACGGAAGAAATAGTCCGTAAGGTGAAAGAACAACTTAGTCAATTTTCGATTAGTCAGAGACTGTTCGGCGAATCAGTGCTGGGACTGTCTCAAGGTAGCGTTTCTGACCTACTGGCCCGTCCAAAACCATGGCACATGCTGACGCAGAAGGGTCGTGAGCCGTTCATCCGGATGAAGATGTTTTTAGAGGACGAGAATGCGGTTCACAAACTGGTCGCGTCGCAGTATAAAATCGCCCCCGAGAAGTTGATGCGGACTGGTGGTTACGGCGGTCCTACTCCGATGACGCCCACATCGTTGGGCAAACCATTACCACCGACCAACTGCAGCAAGGTGTCCTCCGTCATGGACCAGCTGAAGTCGGAAAACAGCTCGGATCGCACTAGCCTGCCGCATCACAACTTCCTGCACCAAAGTCCGGCCCAAGTGCACCCTCCACCACCGTCGCCCATTTTCTCCAACTCGGCGTCCCACCAGCTCTCGCCGATGGAGCATTTTAAAAAGTACAATCTGCCCGCTTCCAACCACCAGCCCTGTAACGTTATGCCCTCGTCGCACAATCTAAACGCGTTGCGTAACATCGGCCAGCACATTAGTCCTTCGGTGTATGAAATGGCGGCCCTTACTCAGGAGCTCGATACCCAGACGATCACCACCAAGATCAAAGAAGCCTTGCTGGCCAATAATATCGGCCAAAAGATATTCGGTGAAGCGGTGCTCGGTCTGTCGCAGGGTTCAGTGAGCGAGTTGCTGTCCAAGCCAAAACCGTGGCACATGCTCAGCATCAAGGGACGCGAACCGTTTATCCGTATGCAACTGTGGCTGTCCGACAGCCACAACATTGAAAGACTGCAGGCGCTGAAGAGCGAACGCCGCGAGCTGAACAAGCGTCGAAGAGGCAGCGGCCAGGACAACAGCAGCGACACGTCGTCAAACGACACGTCCGAGTTCTATAACAGCAGCGCCAGCTCGCCGCCGTCGGCCGCCAAAAAGCAGCGCGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCGTTCGCGCTCGACTCGTACCCGAGCGTGGCCACCATCGAATTCCTGGCCACCGAGTTGGGCTTGGCGTCGCGCACCATCACCAACTGGTTCCACAACCATCGGATGCGGTTGAAGCAGCAGTCGCCGCACGGCAGCGAGTCGTCGATGAGCCGCGAGACACAGGGTAGCGGATTCgatccagttcagttcaggtTGCTGCTCAGCCAGCGGCTAGGTTTCTCGGCGCTGTCGCTGCCCTTCACCGGTCCGTACTTCCCACCCAACCAGGAGCTGGCGGCGCTGATGTCCAGGAGCATTCTGCCGACCAGCGAGCAGCTGTCCGGGCTGGACTTGAGTTTGAAGCGGGACCTGAACTCGATGAACTCGGACGACGAGGACGAGGACATGGACAACGACAGTCATATGGAGTCGGACGAATCCGGAGACGAAACCACAGTTCCTGAGATCACGCCGTCGATAATCGAGTCGCGCAGCTCGAGACGGAAGCCGGCCGCGCCGCAGTGGGTGAATCCGGACTGGCAGGAGGAGTCCGAGGTGATTATAAACGGCGTGTGCGTGATGCAGACGGACGATTTTCCGGCCGCCGACCGGCAGCGCGAGAGCGAGACGGTGCACGTGGAGCCGAAGCCGGCCTCGGACGGCGAGTCGCCGCGCGAGGCCGAGGAGAACGGCGACGAGCACGCGGAAGCGGAGTCCGAAACGAAGGACGAGGTGTCGTCGCGGACCAAAGAGCAGCACTCGAACTCGGAGGACAGCGACGAGGACGAACCGCGGCCCTCCGAGGACGGCGTGAAGCCGGAGAAATGGGAAGAGAACTATTGA
Protein Sequence
MFLLFQISQLVEDVHKLQTSIGKLQETTANQIARLEEELSHRRQHILRLEARLETQKDYEDIKRQLCIYKSDNKLIENIENNNVSTTSTTTNTTTASTTTDSEPLSDRVKSEPFTQKRNQSISPSESQSDLVRAPSRSSEPTFSFPTSGSAPPGLQNVEQFGSFLGEEIVANWRRSLERTIISQSSSTSPPNVTAATLSLPASKPFQLPPSPTNTSPAPHSPRDTESHKTDYSHDAQESSEEIGQSKSTRTHSEHSDKEGPTETPISRNDTPKSLADADSPAPSLEHHSHRGDGMTPCKSPASSSDPELISNNNSPHLNNNTSSSNNNIPPGLINGLCGINMGLNNNLPMNFDMLKSQFRFDDPRSPFRFGDDPGSIVGRYGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKGKDPGMPTVFTRGDSDMTEERIAHILSEASHLMKSSSHSQDQETRSNEDSKSPNRGQCASPVSRDGFSSRKLKKYEHDDVSHDQVLRIYQEELAKLMGRDHAFPGFMFPPFFGANGGPGAASSEDIRMSLDAYNRELAKLQNCPQSQISQNMSGLLGLHPQPANNNNNSSANTGNGGGVGANAGSGGQPPVSNGVIQDLSLPKAERKSDVKLPNGDLSNDKPEFKKESVPTSESFSEAMKHAGSAFSLVRPKTEPGSTSASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGGPTPMTPTSLGKPLPPTNCSKVSSVMDQLKSENSSDRTSLPHHNFLHQSPAQVHPPPPSPIFSNSASHQLSPMEHFKKYNLPASNHQPCNVMPSSHNLNALRNIGQHISPSVYEMAALTQELDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSHNIERLQALKSERRELNKRRRGSGQDNSSDTSSNDTSEFYNSSASSPPSAAKKQRVLFSEEQKEALRLAFALDSYPSVATIEFLATELGLASRTITNWFHNHRMRLKQQSPHGSESSMSRETQGSGFDPVQFRLLLSQRLGFSALSLPFTGPYFPPNQELAALMSRSILPTSEQLSGLDLSLKRDLNSMNSDDEDEDMDNDSHMESDESGDETTVPEITPSIIESRSSRRKPAAPQWVNPDWQEESEVIINGVCVMQTDDFPAADRQRESETVHVEPKPASDGESPREAEENGDEHAEAESETKDEVSSRTKEQHSNSEDSDEDEPRPSEDGVKPEKWEENY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2