Pvib006341.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- ct
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000065.1:814539-837206[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-27 2.1e-23 82.6 0.0 3 72 417 487 415 492 0.95 2 3 4.3e-31 2.7e-27 95.0 0.1 3 77 819 894 817 896 0.96 3 3 5.7e-31 3.6e-27 94.7 0.1 3 76 1032 1106 1030 1109 0.96
Sequence Information
- Coding Sequence
- ATGTTGATAAGAAACGGTCGAACCATCAGGCACAGAATCTCACAATTAGTAGAAGATGTACATAAATTACAAACAAGCATAGGAAAATTACAAGAAACGACTGCTAATCAAATCGCGAGATTAGAAGAAGAACTTAGTCATAGGAAACAGCATATTCTCCGTCTAGAGGCAAGACTAGAAGCACAACGCGACTACGAAGATGTTAAGAGACAACTTAATGTTTTAAAGGCTGTGGATAAACGATTAGGAGGAGAAAAGGAAGAAACTAGTACGGCGACCAGTACGACAAGTAGCACGACGACGGAAACGGACCGTTTATCGGAACGTATAAAAAGCGAAGCGGTTTCTCAAAAACGTAATCAAAGCGCATCACCGCCCGATTTGCAAGGAGATCTGGTCCGTGCTTCGAGTCGTTCTTCCACCGAGCAAAATCTACCGTTTCCGCCTGGTGGAAACGTgccgccgccgccaccgccgccgccgccgggcTTACAGAACGTCGAACAATTCGGATCGTTTTTGGGCGAAGAAATAGTAGCGAATTGGAGACGATCTTTGGAAAGGACGATCATTAGTCAATCTTCCTCTTCGTCGCCACCGAACGTCACGGCAGCCGCGTTATCGCTTCCCCCTAGTAAATCATTTCAACTGCCGCCCTCGCCCACGAATACGTCACCTGTTCCTCATTCGCCGCCCGAAAACGAATCCCATAAAACAGACTATTCCCACGATGCTCAAGAATCTTGCGACGATATCGGTCAAACGAAATCGAACGCTGTCCAAAGTGAAAATTCCGACAAGGATGGTGCCAACGAAACAATATCGAGAAACGATACGCCCAAATCGATGGAAGCCGATTCGCCTGCTCCTTCCTTAGAACACCATAGTCACCGAGCCGATGGCATGACCCCGTGCAAATCGCCGGCCAGCAGCAGCGATCCCGAATTGATATCCAACAACAACTCGCCCCATTTAAACAATAACAATAGCAATAGCAACAACAATTTACCGGCCGGACTGATAAACGGCCTGTGCGGTATCAACATGGGTCTCAATAACAATCTGCCGATGAATTTCGACATGCTCAAGTCACCGTTCCGATTTGAAGATCCTAGATCTCCCTTCAGATTCGGAGACGACCCCGGTAGCATCGTAGGCCGATATGGCGAATCACTCATCCCCAAAGGTGATCCGATGGAAGCCCGATTGCAAGAAATGCTGCGATACAATATAGATAAATATTCGACCCAGAATTTAGATACCTTACATATAGCCAGACGAGTACGCGAATTATTATCCATACATAACGTCGGCCAAAGGCTATTCGCCAAATACGTACTAGGCCTGTCGCAAGGCACAGTCTCAGAATTACTTTCAAAACCAAAACCTTGGGATAAACTGACTGAAAAAGGAAGAGACAGTTATAGGAAAATGCACGCGTGGGCCTGCGACGAAAACGCCATCTTATTGTTAAAATCGCTAATTCCGAAAAAAgGTAAAGATCCCGGTATGCCGAATGTATTTTCACGGGGCGATTCCGATATGACCGAGGAACGTATTGCTCATATTTTGAGCGAGGCTACtcaaatgatgaataaaaatccCCATAATCAAGATCACGATACGCGCAGCAACGAAGATAGCAAATCACCGAATCGTGGTCAAtgCGCCTCGCCAGTATCTCGAGACGGATTATCGaacagaaagttgaaaaaatacgagcACGATGACGTATCGCATGATCAAGTCGTTAGAATATATCAAGAAGAATTAGCCAAATTAATGGGTAGACGAATGGACGATCATACATTTCCTGGATTCATGTTCCCTACATTTTTCGGTGGCAATGGCGGTTCGGCGTCTGGAAACGGAGACGATATCAGAATGTCGTTGGACGCCTACCATCGAGAATTAGCCAAATTACAAAATTGCCCTCAAAGccaaattagtcaaaatatgTCCGGATTGTTGGGTCTGCATTCGCAGACGGCAGCGGCCAATAGTACACCTTCGAATAACAGTCAACCTCCGATGAGTAACGGAATAATACAAGATTTATCATTACCAAAAAACGAACGTAAACCAGAATCAGTAAAACTTCCGAATGGTGATTTGAGCAACGACAGGCTGGATTTCAAAAAGGAGTCGCCGTCGGTATCCGAATCTTTATCGGAAGCCATGAAGCACGCGGGTAGTGCTTTTTCATTAGTTAGGCCAAAAACCGAACCAGATTTTATTAAAGGTTCGGCATCAGCGAGCAGTTCTCCATTGGGAAATTCAATCCTACCTCCTGAAGATTTTTCTCCCTCCGCTTCGGTTAGTCCGTTACAAAGAATGGCGTCCATAACGAATTCGTTGATCTCACAGCCGCCGACACCGCATCATCATGCGCCGTCGCAACGTCCTTTAAAAGCAGTCTTGCCGCCGATAACGCAGCAACAGTTTGATCAGTTTAATAATCTGAATACCGAAGAAATAGTTCGTAAGgtgAAAGAACAACTTAGTCAATTTTCCATCAGTCAAAGATTATTCGGCGAATCGGTACTAGGATTATCACAAGGCAGCGTATCCGATTTATTAGCTCGTCCCAAACCGTGGCATATGCTTACTCAGAAAGGCCGAGAACCGTTCATTAGAATgaaaatgtttctagaagaTGACAACGCTGTACATAAATTAGTCGCCTCACAATATAAAATCGCACCCGAAAAACTAATGAGAACTGGCGGATACGGCGGACCGGGTCcgaTCACGCCGGCATCATTAGGTAAACCTATACCACCTACTAATTGTGGCAAAATTCCATCGGTGGCCGATCAgctaaaatcagaaaatagcaacGATCGATCGAGTTTGCCTCATCATAGTTTCTTACATCAAGGTCCACCACAGGTACATCCTCCTCCACCATCACCtatattttccaattcaacTTCGCACCAATTATCGTCGATggagcattttaaaaaatataacctACCTTCTTCTAATTCTCCGTCGTGCAATGTTATGTCGCAGTCTCACAATTTGAATGCGTTGAGAAACATTGGTCAACATATTAGTCCATCCGTTTATGAAATGGCTGCATTAACTCAAGAACTCGATACTCAAATAATTACTACCAAAATTAAGGAGGCCTTGTTAGCCAACAATATCGGACAAAAGatATTTGGAGAAGCTGTCCTAGGGCTATCGCAAGGGTCAGTCAGCGAATTACTTTCAAAACCAAAGCCTTGGCACATGCTGAGCATCAAAGGTCGAGAACCTTTTATTCGAATGCAACTATGGCTTTCGGATAGTCACAATATTGAAAGGCTGCAAGCTTTGAAAACCGAAAGACGCGAACTAAGCAAAAGAAGAAGAGGTTCTGGTCAAGACAACAGCAGCGACACGTCATCCAACGATACGTCCGAATTCTACAGCAGCAGCGCTAATTCGCCTCCGTCCGCGGCCAAAAAGCAACGAGTTCTATTCTCCGAAGAGCAAAAAGAAGCCCTGAAGTTGGCTTTCGCGCTAGACCCTTATCCGAGCGTAGCCACTATAGAATTTCTAGCCACCGAACTAGGTCTAGCTTCGCGAACCATCACTAACTGGTTCCACAATCACAGAATGCGATTAAAACAGCAATCTCCGCATGGCAACGAACCCCAAATGAATCGCGAATCGCCAGGCAACGGTTTCGATCCGGTTCAGTTCAGACTTCTGTTAAGTCAACGATTAGGATTCTCGGCTTTATTCCCGAATCCGTATTTCCCTCCGAATCCCGAACTGGCGGCTTTAATGTCTCGAAACATAATACCAACCAGCGAGCAACTCTCGGGCTTAGATCTGAGCCTGAAACGTGACATGAGTTCGATGAATTCGGACGACGAAGACGAAGATATGGATAACGATAGTCACCTAGAATCGGAAGATTCGGGCGACGAAACGACAGTTCCTGAAGTCACTCCATCCATCATCGAATCCAGAAGCTCTAGACGAAAACCAGCCGCGCCCCAGTGGGTCAATCCCGATTGGCAAGAAGAATCCGAGGTGATAATTAACGGCGTGTGTATTATGCAAACCGACGATTTCCCTGCCGATCGGCAACGTGAATCGGAAACGGTGCATATTGAACCGAAACCAGCCATAGATGGAGCAGCCGAGATCCCAATTCAGGCTTCCGAAATTACCGAACGTGACGAAACCGAGCCCACTAAAAGTGTCGAGGCTGCTCCAGAGGAAAAGTCGGAGTTCAAAAAAGATCATTCCAATTCGGAAGATAGCGACGATGGAGAAACCGAACAAATCGACGAACCAGAGGAAAGATTCTAA
- Protein Sequence
- MLIRNGRTIRHRISQLVEDVHKLQTSIGKLQETTANQIARLEEELSHRKQHILRLEARLEAQRDYEDVKRQLNVLKAVDKRLGGEKEETSTATSTTSSTTTETDRLSERIKSEAVSQKRNQSASPPDLQGDLVRASSRSSTEQNLPFPPGGNVPPPPPPPPPGLQNVEQFGSFLGEEIVANWRRSLERTIISQSSSSSPPNVTAAALSLPPSKSFQLPPSPTNTSPVPHSPPENESHKTDYSHDAQESCDDIGQTKSNAVQSENSDKDGANETISRNDTPKSMEADSPAPSLEHHSHRADGMTPCKSPASSSDPELISNNNSPHLNNNNSNSNNNLPAGLINGLCGINMGLNNNLPMNFDMLKSPFRFEDPRSPFRFGDDPGSIVGRYGESLIPKGDPMEARLQEMLRYNIDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKGKDPGMPNVFSRGDSDMTEERIAHILSEATQMMNKNPHNQDHDTRSNEDSKSPNRGQCASPVSRDGLSNRKLKKYEHDDVSHDQVVRIYQEELAKLMGRRMDDHTFPGFMFPTFFGGNGGSASGNGDDIRMSLDAYHRELAKLQNCPQSQISQNMSGLLGLHSQTAAANSTPSNNSQPPMSNGIIQDLSLPKNERKPESVKLPNGDLSNDRLDFKKESPSVSESLSEAMKHAGSAFSLVRPKTEPDFIKGSASASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPTPHHHAPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGPGPITPASLGKPIPPTNCGKIPSVADQLKSENSNDRSSLPHHSFLHQGPPQVHPPPPSPIFSNSTSHQLSSMEHFKKYNLPSSNSPSCNVMSQSHNLNALRNIGQHISPSVYEMAALTQELDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSHNIERLQALKTERRELSKRRRGSGQDNSSDTSSNDTSEFYSSSANSPPSAAKKQRVLFSEEQKEALKLAFALDPYPSVATIEFLATELGLASRTITNWFHNHRMRLKQQSPHGNEPQMNRESPGNGFDPVQFRLLLSQRLGFSALFPNPYFPPNPELAALMSRNIIPTSEQLSGLDLSLKRDMSSMNSDDEDEDMDNDSHLESEDSGDETTVPEVTPSIIESRSSRRKPAAPQWVNPDWQEESEVIINGVCIMQTDDFPADRQRESETVHIEPKPAIDGAAEIPIQASEITERDETEPTKSVEAAPEEKSEFKKDHSNSEDSDDGETEQIDEPEERF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00005193;
- 90% Identity
- iTF_00725294;
- 80% Identity
- iTF_01263244;