Basic Information

Gene Symbol
ct
Assembly
GCA_900050545.1
Location
FIZV01029704.1:1745-10124[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.22 3.1e+03 -1.1 0.1 2 26 58 82 57 83 0.86
2 4 1.6e-27 2.3e-23 82.6 0.0 3 72 382 452 380 457 0.95
3 4 2.1e-31 2.9e-27 95.1 0.1 3 77 783 858 781 860 0.96
4 4 1.8e-31 2.5e-27 95.3 0.1 3 76 994 1068 992 1071 0.96

Sequence Information

Coding Sequence
ATGTCAACCCTTCGTCAGCTTCAACCTAGAAAGTTACGATTTGCTGATTCTGGacataattgcaaaattataaattcgtcGAGTGTTTTGTCGTTCGTTTTTGTTTTAAAGGCTGTGGATAAACGCTTaggagaaaaagaagaaatcagTACGGCGACCAGTACGACAAGTAGCACAACGACGGAAACAGATCGTCTGTCAGAGCGTATAAAAAGCGAggttgtttctcaaaaacttaatCAAAGCGCATCACCTCCCGATTTGCAAGGAGATTTGGTCCGCGCATCAAGTCGTTGTTCCACCGAGCAAAACGTAACGTTTCCGTCTGGTGGAAACGTGCCGCCGCCGGGCTTACAAAATGTCGAACAATTCGGATCATTTTTAGGAGAAGAAATAGTAGCGAATTGGAGACGATCTTTGGAGAGAACGATCATTAGTCAATCTTCTTCTTCGTCGCCACCGAACGTCACGGCAGCCGCGTTATCGCTTCCCCCTAGTAAATCATTTCAACTACCGCCCTCGCCTACGAATACGTCACCTGTTCCTCATTCGCCGCCCGAAAACGAATCCCATAAAGCCGACTATTCCCACGATGTTCAAGATCTGTATCTTGTACTAAAATacgcgtttttctttttactctGGTTCGCAGGTCAAACTAAATCAAACGCTGTCCAAAGTGAAACTTCCGACAAGGATGGTCCAAATGAAACAATATCGAGAAACGATACGCCAAAATCAATGGAAGCTGATTCGCCGGCTCCGTCCTTAGAACATCATAGTCACCGAGGCGATGGCATGACACCGTGCAAATCGCCAGCCAGCAGCAGCGACCCcgaattaatttccaataatAATTCGCCGCATTTAAACAATAACAATAGCAGTAGCAACAATAACATACCAGCCGGTCTGATAAACGGTCTATGCGGCATTAACATGGGCCTCAATAACAACTTGCCTATGAATTTCGACATGCTCAAGTCACAGTTCCGTTTCGAAGATCCCAGATCGCCGTTCAGATTCGGAGACGATCCCGGTAGTATGGTCGGTCGATACGGCGAATCATTGATCCCAAAAGGCGATCCGATGGAGGCGAGATTGCAAGAAATGCTACGGTACAATATAGATAAATATTCGACGCAGAATTTAGACACCTTACATATAGCCAGAAGGGTACGCGAGTTATTATCCATACATAACGTCGGACAGAGATTATTCGCCAAATACGTACTCGGCCTATCGCAAGGCACGGTCTCCGAATTGCTTTCCAAACCTAAACCTTGGGACAAGCTGACTGAAAAAGGACGAGACAGTTATAGAAAAATGCACGCGTGGGCTTGCGACGAAAATGCCATCTTGCTATTGAAGTCGCTGATTCCGAAAAAAgGTAAAGATCCCGGTATGCCAAATGTATTTTCACGCGGCGATTCAGATATGACAGAGGAACGTATCGCTCATATTTTGAGCGAAGCAAGTCAATTGATGAAGACGACGCCTCATAATCAGGACGATACTCGCAGCAACGAAGACAGTAAATCACCTAATCGTGGTCAATGCGCCTCGCCAGTTTCTCGTGATGGATTATCGAACAGGAAACTGAAGAAGTACGAACACGATGACGTATCGCATGATCAAGTGGTCAGAATATACCAAGAAGAATTAGCCAAATTAATGGGTAGACGATTAGAAGATCACGCATTTCCTGgATTCATGTTCCCTCCATTTTTCGGTGGCAATGGTGGCACTGGATCGGGAAACGGTGACGATATCAGAATGTCTTTGGACGCATATCATCGAGATTTagccaaattgcaaaattgtccgCAAAGCCAAATTAGTCAAAATATGTCTGGATTGTTAGGACTTCATACCCAAACGTCGGCGGCCAATAGCACACCTTCGAATAACAGCCAACCTCCGATGAGCAACGGTATAATACAAGATTTATCATTACCAAATAATGAACGCAAACCAGAATCAGCGAAACTTCCCAATGGtgatttaaataatgaaagatTGGACTTCAAAAAGGAGTCTCCGTCGGTATCTGAATCCATTTCGGAAGCGATAAAACACGCCGGGAGTGCTTTTTCCTTAGTTAGGCCAAAAACTGAACCAGATTTTATTAAAGGTTCTACATCAGCAAGCAGTTCTCCTTTGGGAAATTCTATTCTACCTCCCGAAGATTTTTCTCCCTCCGCTTCCGTTAGTCCGTTGCAAAGAATGGCGTCCATAACGAATTCGTTGATCTCACAGCCACCAACACCGCATCATCATGCTCCGTCGCAACGCCCTTTGAAAGCAGTACTGCCGCCGATAACGCAACAACAGTTCgatcaatttaataatttaaataccgAAGAAATAGTTCGCAAGgtgaagGAACAACTTAGTCAATTTTCCATCAGCCAGAGATTGTTTGGGGAATCGGTATTAGGATTATCGCAAGGCAGTGTATCCGATTTATTGGCGCGCCCCAAACCGTGGCATATGCTTACTCAAAAAGGCCGCGAACCTTTTATTaggatgaaaatgtttttagaagATGATAACGCTGTACATAAATTAGTCGCTTCTCAATATAAAATTGCgccagaaaaattaatgagaacTGGCGGATACGGAGGACCGACTCCGATGACGCCGTCTTCATTAGGGAAACCTTTACCACCTACTAACTGTGGAAAAGTTTCATCGGTAGTCGATCAGCTAAAATCGGAAAATAGCAACGATCGATCGAGTCTACCTCATCATAGTTTTTTGCACCAAGGTCCACCACAGGTACATCCTCCTCCACCGTCACCtatattttcgaattcatCTCAGCACCAATTATCACCGATggaacactttaaaaaatataacataCCTAATTCTCAGTCCTGCAATGTTATGTCGCAGTCTCATGGTTTGAATGCTTTAAGAAATATCGGTCAACATATTAGTCCATCCGTTTATGAAATGGCTGCGCTAACTCAAGAACTTGATACTCAAATAATCACTACCAAAATTAAGGAAGCGTTATTGGCCAACAATATCGGCCAAAAGATATTCGGAGAAGCGGTTCTAGGACTATCTCAAGGATCAGTCAGCGAATTACtttcgaaaccaaaaccgtGGCATATGTTGAGCATTAAAGGACGAGAACCTTTCATTCGAATGCAATTATGGCTTTCAGACAGTAATAATATTGAAAGACTGCAAGCTCTGAAGAGCGAAAGACGTGAATTAAGCAAGCGAAGAAGAGGTTCGGGTCAGGACAACAGTAGTGATACCTCGTCCAACGATACTTCTGAGTTTTACAGCAGTAGCGCTAATTCACCGCCATCGGCGGCCAAAAAGCAACGAGTTTTATTCTCGGAGGAGCAAAAAGAAGCGCTTAAATTGGCATTCGCTCTAGATCCATATCCCAGCGTAGCCACAATAGAATTTCTAGCCAATGAACTCGGGCTAGCTTCGAGAACAATCACGAATTGGTTCCATAATCATAGAATGCGATTAAAGCAGCAATCGCCGCATGGAAACGAACCCCAAATGAATCGCGAATCGCAAGGCAACGGTTTCGACCCTGTTCAATTCAGACTTTTGTTGAGTCAGCGATTAGGCTTTTCAGCTCTATCGTTGCCATTCCCAAATCCATATTTTCCGCCGAATCCGGAATTAGCGGCTTTGATGTCTAGAAATATAATACCAACTAGTGAACAACTTTCAGGCTTAGATTTGAGTCTCAAGCGTGACATGAGTTCGATGAATTCcgacgacgaagacgaagaTATGGATAACGATAGTCATTTAGAGTCGGAAGACTCTGGCGATGAAACAACGGCTCCTGAAGTTACTCCATCCATCATCGAATCCAGAAGCTCGAGACGGAAACCCGCCGCGCCTCAGTGGGTTAATCCAGATTGGCAAGAGGAATCCGAAGTGATAATTAACGGTGTATGTATCATGCAAACTGACGATTTTCCTGCCGATCGTCAACGTGAATCGGAAACCGTACATATTGAACCAAAACCTGCCGTCGATGGCGGCGATCTCCCCAGTCAGGTTTCCGAAAGTAACGACGGTGCTGCAGACAAAACCGAGCCTAATAAAAGTGCAGACACTGCTGTCTTAGAAGAAAAGAATGACTTCAAGAAAGATCATTCCATCTCCGAAGATAGTGACGATGGTGAAAATGATCACATCGACGATAACGAAGAAAGATTTTAA
Protein Sequence
MSTLRQLQPRKLRFADSGHNCKIINSSSVLSFVFVLKAVDKRLGEKEEISTATSTTSSTTTETDRLSERIKSEVVSQKLNQSASPPDLQGDLVRASSRCSTEQNVTFPSGGNVPPPGLQNVEQFGSFLGEEIVANWRRSLERTIISQSSSSSPPNVTAAALSLPPSKSFQLPPSPTNTSPVPHSPPENESHKADYSHDVQDLYLVLKYAFFFLLWFAGQTKSNAVQSETSDKDGPNETISRNDTPKSMEADSPAPSLEHHSHRGDGMTPCKSPASSSDPELISNNNSPHLNNNNSSSNNNIPAGLINGLCGINMGLNNNLPMNFDMLKSQFRFEDPRSPFRFGDDPGSMVGRYGESLIPKGDPMEARLQEMLRYNIDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKGKDPGMPNVFSRGDSDMTEERIAHILSEASQLMKTTPHNQDDTRSNEDSKSPNRGQCASPVSRDGLSNRKLKKYEHDDVSHDQVVRIYQEELAKLMGRRLEDHAFPGFMFPPFFGGNGGTGSGNGDDIRMSLDAYHRDLAKLQNCPQSQISQNMSGLLGLHTQTSAANSTPSNNSQPPMSNGIIQDLSLPNNERKPESAKLPNGDLNNERLDFKKESPSVSESISEAIKHAGSAFSLVRPKTEPDFIKGSTSASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPTPHHHAPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGPTPMTPSSLGKPLPPTNCGKVSSVVDQLKSENSNDRSSLPHHSFLHQGPPQVHPPPPSPIFSNSSQHQLSPMEHFKKYNIPNSQSCNVMSQSHGLNALRNIGQHISPSVYEMAALTQELDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNIERLQALKSERRELSKRRRGSGQDNSSDTSSNDTSEFYSSSANSPPSAAKKQRVLFSEEQKEALKLAFALDPYPSVATIEFLANELGLASRTITNWFHNHRMRLKQQSPHGNEPQMNRESQGNGFDPVQFRLLLSQRLGFSALSLPFPNPYFPPNPELAALMSRNIIPTSEQLSGLDLSLKRDMSSMNSDDEDEDMDNDSHLESEDSGDETTAPEVTPSIIESRSSRRKPAAPQWVNPDWQEESEVIINGVCIMQTDDFPADRQRESETVHIEPKPAVDGGDLPSQVSESNDGAADKTEPNKSADTAVLEEKNDFKKDHSISEDSDDGENDHIDDNEERF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00005193;
90% Identity
iTF_00725294;
80% Identity
iTF_01490835;