Basic Information

Gene Symbol
ct
Assembly
GCA_959613365.1
Location
OY390715.1:37819790-37883947[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.13 8.6e+02 0.2 0.1 2 26 188 212 187 213 0.88
2 4 2.8e-27 1.9e-23 82.4 0.0 3 72 526 596 524 601 0.95
3 4 3.5e-31 2.4e-27 94.9 0.1 3 77 927 1002 925 1004 0.96
4 4 3.1e-31 2.1e-27 95.1 0.1 3 76 1138 1212 1136 1215 0.96

Sequence Information

Coding Sequence
ATGCCATTGTACTCTTCCCAGagAGCTACACTGGCTGAAAAAGAAGTTTCAGCGCTGAAAGAGCAATTGGCAAATACTAATCAACCTCACTCGGATACACAAAAAGTATCTGGTAACTCTGATGATCTCACTTCCCATAGACCTTCGTTAGAAACCGAATTATCCGCCAAAGATAAAGAGGAACTCGAAGGAGAAGGCGAAGGCGAAGGCGAAGGCGAACAACACGACGCGGTCgtggcgatggcgatggcgaaTTCTAAAAGGGGTCGTGGACGTGGAGCTGAAGGAGAAAGTGCTGCGGCGATGTTGATCTCACAATTAGTAGAAGATGTACATAAATTACAAACGAGCATAGGAAAATTACAAGAAACAACTGCTAATCAAATTGCTAGATTAGAAGAAGAACTTAGTCATAGGAAACAACATATTCTCCGTCTAGAGGCAAGACTAGAAGCGCAACGCGACTACGAAGATGTTAAAAGACAACTTAATGTTTTAAAGGCTGTGGATAAACGCTTaggagaaaaagaagaaatcagTACTGCGACCAGTACGACAAGTAGCACAACGACGGAAACAGATCGTCTGGCAGAGCGTATAAAAAGCGAGgttgtttctcaaaaacttaATCAAAGCGCATCACCTCCTGATTTGCAAGGAGATTTGGTACGCGCATCGAGTCGTTCTTCCACCGAGCAAAACGTAACGTTTCCGTCTGGTGGAACGGTggtgccgccgccgccgccgccgccgccgccgggGTTACAAAATGTCGAACAATTCGGATCGTTTTTAGGAGAAGAAATAGTAGCGAATTGGAGACGATCTTTGGAGAGAACGATCATTAGTCAATCTTCTTCTTCGTCGCCGCCGAACGTGACGGCAGCCGCGTTATCGCTTCCCCCTAGTAAATCATTTCAACTACCGCCCTCGCCTACGAACACGTCACCTGTTCCTCATTCGCCGGCCGAAAACGAATCCCATAAAGCCGACTATTCCCACGATGCTCAAGAGTCTTCGGAAGAAATCGGTATAATATGTTGCATATGTTGTCAAAtacgcgtcgcgtcgcgtatTAATTTCCGTCAAACTAAATCAAATGCTGTCCAAAGTGAAACTTCCGACAAGGATGTGGCCAACGAAACAATATCGAGAAACGATACGCCAAAATCAATGGAAGCTGACTCGCCGGCTCCGTCCTTAGAACACCATAGTCACCGAGGCGATGGCATGACACCGTGCAAATCGCCAGCCAGCAGCAGCGATCCCgaattaatttccaataatAATTCGCCGCATTTAAACAATAACAATAGCAGTAGCAACAATAACATACCAGCCGGTCTGATAAACGGTCTATGCGGCATCAACATGGGTCTCAATAACAACTTGCCTATGAATTTCGACATGCTCAAGTCGCAGTTCCGTTTCGAAGATCCCAGATCGCCGTTCAGATTCGGAGACGATCCCGGTAGCATCGTCGGTCGTTACGGTGAATCGTTGATCCCGAAAGGCGATCCGATGGAGGCGCGATTGCAAGAAATGCTACGATACAATATAGATAAATATTCGACGCAGAATTTAGACACCTTACATATAGCCAGAAGAGTACGCGAGTTATTATCCATACATAACGTCGGACAGAGGTTATTCGCCAAATACGTACTGGGCCTGTCGCAAGGCACAGTTTCCGAATTACTTTCCAAACCTAAACCCTGGGACAAGCTGACTGAAAAAGGACGAGACAGTTATAGAAAAATGCACGCGTGGGCTTGCGACGAAAATGCCATCTTACTCTTGAAGTCGCTGATTCCGAAAAAAGGTAAAGATCCCGGTATGCCGAATGTATTTTCACGCGGCGATTCAGATATGACCGAGGAACGTATCGCTCATATTTTGAGCGAAGCCAGTCAATTGATGAAGACGACTCATAATCAGGATGATACTCGCAGCAACGAAGACAGCAAATCACCCAATCGTGGTCAAtgCGCCTCGCCTGTTTCTCGTGATGGATTATCGAACAGAAATAAGCTGAAAAAGTACGAACACGATGACGTATCACATGATCAAGTAGTCAGAATATACCAAGAAGAATTAGCCAAATTAATGGGTCGACGATTAGAAGACCACGCATTTCCTGGATTCATGTTCCCTCCATTTTTTGGTGGCAATGGAAGCACTGGGTCGGGAAACGGCGAAGAGATCAGAATGTCTTTGGACGCATATCACCGAGAATTAGCCAAATTGCAAAACTGTCCGCAAAGCCAAATTAGTCAAAATATGTCCGGACTTTTGGGACTTCATACACAAACGTCGACGGCCAATAATACACCATCGAATAACATCCAGCCTCCGATGAGTAACGGTATAATACAAGATTTATCATTACCCAAAAGTGAACGCAAACCAGAATCAGCGAAACTTCCAAATGGCGATTTAAATAACGAAAGATTGGACTTCAAAAAGGAGTCTCCGTCGATATCCGAGTCTCTGTCGGAAGCGATAAAACACGCCGGCAGTGCTTTTTCCTTAGTTAGGCCGAAAACTGAACCAGATTTTATTAAAGGTTCTGCATCAGCTAGCAGTTCTCCTTTGGGAAATTCTATTCTACCTCCCGAAGATTTTTCTCCCTCCGCTTCCGTTAGTCCGTTGCAAAGAATGGCGTCCATAACGAATTCGTTGATCTCACAGCCACCGACACCGCATCATCATGCTCCGTCGCAACGCCCTTTGAAAGCGGTACTTCCGCCGATAACGCAACAACAGTTCGatcaatttaataatttaaataccGAAGAAATAGTTCGCAagGTGAAAGAACAACTTAGTCAATTTTCCATCAGCCAGAGATTGTTCGGCGAATCGGTATTGGGATTGTCGCAAGGCAGCGTATCCGATTTATTGGCACGTCCCAAACCGTGGCATATGCTTACGCAAAAAGGCCGCGAACCTTTTATTAGGATGAAAATGTTTCTAGAAGATGATAATGCTGTACATAAATTAGTCGCTTCTCAGTATAAAATTGCgccagaaaaattaatgagaacTGGCGGATACGGAGGACCGACTCCGATGACGCCATCTTCATTAGGTAAACCTTTACCACCTACCAACTGTGGAAAAGTTCCATCGGTAGTCGATCAGCTAAAATCGGAAAATAGCAACGATCGGTCGAGTCTACCTCATCATAGTTTTTTGCACCAAGGTCCACCACAGGTACATCCTCCTCCACCGTCACctatattttcgaattcatCTCCGCACCAATTATCATCGatggaacattttaaaaaatataacataCCTAATTCTCAGTCCTGCAATGTTATGTCGCAGTCTCACAATTTGAATGCTTTAAGAAATATCGGTCAACATATTAGTCCATCCGTTTATGAAATGGCTGCACTAACTCAAGAACTCGATACTCAAATAATCACGACCAAAATTAAGGAAGCGTTGTTAGCCAACAATATCGGTCAAAAGATATTCGGAGAAGCGGTTCTAGGCCTATCTCAAGGATCAGTCAGCGAATTACTTTCAAAACCCAAACCGTGGCATATGCTAAGCATCAAAGGACGAGAACCTTTCATTCGAATGCAATTATGGCTTTCAGATAGTAATAATATTGAAAGACTGCAAGCTCTGAAGAGCGAAAGACGCGAATTAAGCAAACGAAGAAGAGGTTCGGGTCAGGACAACAGTAGTGATACCTCATCGAACGATACTTCCGAGTATTACAGCAGCACCGCTAATTCGCCGCCATCGGCCGCCAAAAAGCAGCGAGTTTTATTCTCGGAGGAGCAAAAAGAAGCGCTTAAATTGGCATTCGCCTTAGATCCATATCCGAGCGTAGCTACGATAGAATTTCTAGCCAACGAACTAGGCCTAGCTTCGAGAACAATCACGAACTGGTTCCATAATCATAGAATGCGATTAAAGCAGCAGTCGCCGCATGGAAGCGAACCCCAAATGAATCGAGATTCGCAAGGCAACGGTTTCGACCCGGTTCAATTCAGACTTCTGTTGAGTCAGCGATTAGGCTTCTCGGCTCTATCGTTGCCATTCCCGAACCCGTATTTCCCGCCGAATCCGGAACTGGCGGCTTTGATGTCTAGAAACATAATACCAACCAGCGAACAACTTTCAGGCTTAGATTTGAGCCTAAAACGTGACATGAGCTCGATGAATTCGGACGACGAAGACGAGGATATGGATAACGATAGTCATTTAGAGTCGGAAGACTCGGGCGATGAAACAACCGTTCCCGAAGTTACTCCATCCATCATCGAATCGAGAAGCTCGAGACGGAAACCCGCTGCCCCCCAATGGGTTAACCCCGACTGGCAAGAGGAATCCGAAGTGATAATCAACGGCGTGTGTATCATGCAAACCGACGACTTTCCCGCCGACCGGCAACGTGAATCGGAGACCGTACATATTGAACCAAAACCCGCCGTCGATGGCGCCGAACTCCCCAGTCAGGTTTCCGAAAGTAACGACGATGCCGACGAAACCGAGCCCAATAAAAGCGTAGAAGCTGCTGCTGCCCCAGAAGAAAAGAGTGATTTTAAGAAAGATCATTCCGTCTCCGAAGAAAGCGACGATGGTGAAAATGATCACATCGACGATAACGaagaaagattttaa
Protein Sequence
MPLYSSQRATLAEKEVSALKEQLANTNQPHSDTQKVSGNSDDLTSHRPSLETELSAKDKEELEGEGEGEGEGEQHDAVVAMAMANSKRGRGRGAEGESAAAMLISQLVEDVHKLQTSIGKLQETTANQIARLEEELSHRKQHILRLEARLEAQRDYEDVKRQLNVLKAVDKRLGEKEEISTATSTTSSTTTETDRLAERIKSEVVSQKLNQSASPPDLQGDLVRASSRSSTEQNVTFPSGGTVVPPPPPPPPPGLQNVEQFGSFLGEEIVANWRRSLERTIISQSSSSSPPNVTAAALSLPPSKSFQLPPSPTNTSPVPHSPAENESHKADYSHDAQESSEEIGIICCICCQIRVASRINFRQTKSNAVQSETSDKDVANETISRNDTPKSMEADSPAPSLEHHSHRGDGMTPCKSPASSSDPELISNNNSPHLNNNNSSSNNNIPAGLINGLCGINMGLNNNLPMNFDMLKSQFRFEDPRSPFRFGDDPGSIVGRYGESLIPKGDPMEARLQEMLRYNIDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKGKDPGMPNVFSRGDSDMTEERIAHILSEASQLMKTTHNQDDTRSNEDSKSPNRGQCASPVSRDGLSNRNKLKKYEHDDVSHDQVVRIYQEELAKLMGRRLEDHAFPGFMFPPFFGGNGSTGSGNGEEIRMSLDAYHRELAKLQNCPQSQISQNMSGLLGLHTQTSTANNTPSNNIQPPMSNGIIQDLSLPKSERKPESAKLPNGDLNNERLDFKKESPSISESLSEAIKHAGSAFSLVRPKTEPDFIKGSASASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPTPHHHAPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGPTPMTPSSLGKPLPPTNCGKVPSVVDQLKSENSNDRSSLPHHSFLHQGPPQVHPPPPSPIFSNSSPHQLSSMEHFKKYNIPNSQSCNVMSQSHNLNALRNIGQHISPSVYEMAALTQELDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNIERLQALKSERRELSKRRRGSGQDNSSDTSSNDTSEYYSSTANSPPSAAKKQRVLFSEEQKEALKLAFALDPYPSVATIEFLANELGLASRTITNWFHNHRMRLKQQSPHGSEPQMNRDSQGNGFDPVQFRLLLSQRLGFSALSLPFPNPYFPPNPELAALMSRNIIPTSEQLSGLDLSLKRDMSSMNSDDEDEDMDNDSHLESEDSGDETTVPEVTPSIIESRSSRRKPAAPQWVNPDWQEESEVIINGVCIMQTDDFPADRQRESETVHIEPKPAVDGAELPSQVSESNDDADETEPNKSVEAAAAPEEKSDFKKDHSVSEESDDGENDHIDDNEERF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00005193;
90% Identity
iTF_00725294;
80% Identity
iTF_00194195;