Basic Information

Gene Symbol
ct
Assembly
GCA_035079395.1
Location
JAVHKZ010000018.1:27189644-27201005[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.7e-26 7.1e-23 80.9 0.0 3 72 432 502 430 507 0.95
2 3 1.5e-30 2.9e-27 95.0 0.1 3 77 866 941 864 943 0.96
3 3 7.5e-31 1.4e-27 95.9 0.1 3 76 1080 1154 1078 1157 0.96

Sequence Information

Coding Sequence
ATGATCGGCGGCCTTTCTCGTGCTGCGAGGGATTCTGTCCCTGACCTTGGAGTTGTGCGTATTGAAGGCCAAGCTAGGATCTCACAATTAGTAGAAGATGTACATAAGCTGCAGTCGAATTTCGGTAAGCTGCAGGAAACGACGGCTAATCAAATCGCTAAATTAGAGGAAGAACTAAGTCATAGAAAGCAACTTATCTTACGATTAGAGGCTAGGTTAGAAACGCAAAAAGACTACGAAGATATCAAAAGACAGTTGTGttttttaaaGTCTGATAATAAGTTAATCGAAAATATCGAGAACAACAACGTCTCGACGGTAACTACCACAACTACCACTTCCTCCAGTATTGTCGCGGATAGCGATCAGCTGTCGGAACGCATCAAAAGCGATTCGATTTCGCAAAAGCGCAACCAAAGTCTCTCGCCCACGGATTTACAGAGTAATCTAGTGCGCGTATCCAGTCGTTCCTCCGAGCCGCCGTTTTCGTCGTTTCTAACGAGCGGCTCGACACCCGCTGGCCTGCAAAATGTCGAGCAGTTCGGCTCCTTCTTAGGCGAAGAAATCGTCGCCAATTGGAGGCGATCTCTCGAGCGTTCCAGTATTAGTCAATCCTCTTCCACGTCACCGCCGAACGTGACGGCCGCCTCTTTGTTGCTACCCGCTAGTAAATCGTTTCACTTACCTCCGTCGCCGACGAATACGACGTCACCGGCTCCTCATTCACCGCGCGATTCCGAATCGCACAAAACCGACTACTCGCACGATGCTCAAGAGTCTTCGGAAGAAACTGGTCAAACCAAATCAACGCGACCACAAAGCGAGAATTCAGATAAGGACGGCGCCGTTGAAACGTCCATTTCTCGAAACGATACTCCAAAGTCGCTAGCGGATGCGGTCTCGCCGGCACCGTCCATCGAACACCACCACAGTCATCGAGTGGACGGTATGACGCCTTGTAAATCACCGGCCAGCAGCAGCGATCCCGAACTGATATCCAACAACAATTCGCCGCACCTCAACAACAACACCAGCAGCAGTAACAACAACATACCGCCGGGCTTGATCAACGGCCTGTGTGGCATCAACATGGGCCTGAATAACAATCTGCCCATGAATTTCGATATGCTGAAGTCGCAATTTCGTTTCGACGATCCGCGATCGCCGTTTCGTTTCGGCGACGACCCGGGCTCGATGGTGGGTCGTTACGGCGAGTCGCTAATACCCAAAGGCGACCCGATGGAAGCCAGGCTGCAGGAGATGCTGCGCTACAATATCGACAAATACGCTACGCAGAATCTGGATACTTTACACATATCGCGAAGGGTGCGCGAGCTCCTCTCCATCCACAACGTGGGCCAAAGGTTGTTCGCCAAGTACGTGCTCGGTTTGTCGCAGGGCACCGTATCCGAACTGCTATCGAAACCGAAACCGTGGGACAAGCTGACTGAGAAGGGACGTGACAGCTACCGTAAGATGCACGCGTGGGCTTGCGACGAAAACGCTATCCTGCTGCTGAAATCTTTGATTCCGAAAAAAGGTAAAGATCCGGGTATGCCAAACGTATTCGCACGCGGCGATTCCGACATGACGGACGAACGTATCGCGCACATCCTGAGCGAAGCTAGCCACCTAATGAAGTCTTCATCCCTGAATCAGGACCAGGAGACGCGTAGCAATGAGGATAGTAAATCACCAAACCGGGGTCAGTGCACATCACCCATTAGTCGAGATGGTATCTCATGTAGGAAATTAAAGAAATTCGATCACGATGACGTACCTCACGATCAAGTGTTGCGGATATACCAAGAAGAGTTCGCGAAATTGATGGGTCGACGGCTCGAAGAACATACTCCTTTTCCTGGGTTCATGTTTCCGCCCTTCTTCAACGCAAACGGTGGCCCTGGCGCGCCAACCGGCGAAGAATTACGCTTGTCGCTGGAGGCGTACAGTCGCGAAATGGCCAAACTACAAAATTGTCCGCCCGGCCAACTTAGTCAAAATATGTCCGGTCTGCTGGGACTGCATCCGCAAGGAAGCGCAAACAACAACCATAACAATAATAACCACAATAACAGTAGTAGTAATAACGGCGGCAGCGCGAATAGTTTACCCAATTGCAATAGCGGCAGCGCTACTATCGGAGGCGGTGGCAGTCAAACGAACGGTGGCCAGCCTCCAATGAGCAACGGTATCATTCAAGACTTATCGTTACCCAAGGCCGAGCGAAAATCGGACGTGCCGAAATTGATGAACGGTGATCTAAGCAACGATAAGTTGGATTTCAAAAAAGACTCTAGCACCTCAGTTCCGGAATCATTTTCGGAAGCGATGAAGCACGCCGGAAGTGCTTTTTCGCTCGTGAGACCGAAAACCGAGACAAGCTCAACTTCAGCTAGTAGTTCACCTTtaggaaattcaattttaccgCCGGAGGACTTCTCTCCCTCGGCGTCCGTTAGTCCGTTACAAAGAATGGCATCTATAACTAATTCGTTGATCTCACAACCTCCTACGCCGCACCACCATTCACCCTCGCAGCGTCCTCTAAAAGCGGTACTGCCTCCTATCACTCAACAGCAGTTCGATCagttcaataatttaaatacaGAAGAGATTGTTCGCAAGGTGAAAGAACAGCTCAGTCAGTTTTCAATTAGTCAACGATTATTCGGCGAGTCGGTTCTTGGACTGTCTCAGGGTAGCGTTTCCGATTTGTTGGCCCGCCCGAAACCGTGGCACATGTTAACGCAAAAAGGACGCGAACCTTTCATACGCATGAAAATGTTTCTCGAAGACGACAACGCCGTCCACAAGTTAGTCGCTTCACAATACAAAATCGCGCCCGAGAAACTAATGAGGACCGGTGGTTATGGAGGACCAACGCAAATACCACCTACGTCACTGGGTAAGCCGTTACCACCAACAAACTGCGGAAAAGTCACATCGATGATGGATCAGCTCAAGTCCGAAAATACGAGCTCAGTCGAACGCGCAAGTTTACCGCATCCTTTCCTGCATCAGACTCCACCGCAAGTGCATCCTCCACCTCCGTCGCctattttctcaaattcaacCTCGCATCAACTTTCTCCGATGGAACATTTCAAGAAGTACAATCTTTCAGCCCCCAATCATCAGCCCGTCAACGTTCTGTCCCCGTCGCATAATTTGAACGCCCTACGCAATATCGGTCAACACATTAGTCCTTCCGTATACGAAATGGCCGCCTTGACGCAGGAGCTCGATACCCAAACCATCACAACGAAAATTAAGGAAGCCTTGCTGGCAAACAATATCGGCCAAAAGATTTTCGGCGAAGCTGTCCTGGGTTTATCGCAAGGTTCAGTCAGCGAATTACTTTCAAAACCAAAGCCTTGGCATATGCTGAGTATCAAAGGACGCGAACCGTTCATTCGGATGCAGTTGTGGCTATCCGACAGTCACAATATCGAGAGGCTGCAAGCGTTGAAGAGCGAACGTCGCGAACAAAATAAACGAAGACGCGGCTCCGGCCAAGATAACAGCAGTGACACGTCCTCCAACGATACGTCCGAATTCTACGCCAGCAGCGCTAATTCGCCCCCGTCCGCCGCCAAAAAGCAACGAGTATTGTTCTCCGAGGAGCAGAAAGAGGCTCTACGACTGGCGTTCGCGTTGGATCCGTACCCGAGTGTTGCGACAATCGAGTTTTTGGCGAACGAACTCAGCTTAGCGTCACGCACCATTACCAACTGGTTTCACAACCACCGAATGCGCTTAAAGCAACAGTCCCCGCACGCAAACGAGCCACAAATGAATCGCGAACCGCAGAGCAGCGGTTTTGATCCTGTACAGTTCAGATTGCTGTTGAGTCAAAGGCTCGGTTTTTCCGCACTCTCGCTTCCCTTCCCGAATCCGTACTTCCAACCGAATCAAGAACTGGCAGCGCTCATGTCTCGCAACATGATACCTACCAGTGAGCAGTTGTCCGGATTGGATCTGAGCCTGAAAAGGGATATGAATTCggatgacgacgacgatgataTGGATAACGATAGTCATTTAGATTCGGACGATAGCGGTGACGAAAGAGATGCAGTTCCTGAGGTGACGCCTTCGATAATCGAGTCGCGCAGTTCGAGGCGAAAACCAGCCGCTCCTCAGTGGGTGAATCCAGACTGGCAAGAAGAGTCAGAAGTGATAATTAATGGCGTGTGCGTGATGCAGACGGACGACTTCCCGTCGACGGAAAGACAACGAGAAAACGAAACGGTACGCGTAGAACCGAAGCCCGCTTTGGACCGGGCAGATCTACCCGACGCCGAAAATGAGAAGAGCGAGGAAATGGATACAGGCGAAGAAACGGCCGCGAACGAAGATGAAAAATCGAAGGAGGACAATCCGGACATTAAGGAAGAAGCACATTCCAGTTCGGACGCGGAAAACGAGTGCGAGATGTCACGAACGGGGGAGGAGAATAATTCTAACACTAAGGACGAAGAAAAATGGGAAGATAATTACTGA
Protein Sequence
MIGGLSRAARDSVPDLGVVRIEGQARISQLVEDVHKLQSNFGKLQETTANQIAKLEEELSHRKQLILRLEARLETQKDYEDIKRQLCFLKSDNKLIENIENNNVSTVTTTTTTSSSIVADSDQLSERIKSDSISQKRNQSLSPTDLQSNLVRVSSRSSEPPFSSFLTSGSTPAGLQNVEQFGSFLGEEIVANWRRSLERSSISQSSSTSPPNVTAASLLLPASKSFHLPPSPTNTTSPAPHSPRDSESHKTDYSHDAQESSEETGQTKSTRPQSENSDKDGAVETSISRNDTPKSLADAVSPAPSIEHHHSHRVDGMTPCKSPASSSDPELISNNNSPHLNNNTSSSNNNIPPGLINGLCGINMGLNNNLPMNFDMLKSQFRFDDPRSPFRFGDDPGSMVGRYGESLIPKGDPMEARLQEMLRYNIDKYATQNLDTLHISRRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKGKDPGMPNVFARGDSDMTDERIAHILSEASHLMKSSSLNQDQETRSNEDSKSPNRGQCTSPISRDGISCRKLKKFDHDDVPHDQVLRIYQEEFAKLMGRRLEEHTPFPGFMFPPFFNANGGPGAPTGEELRLSLEAYSREMAKLQNCPPGQLSQNMSGLLGLHPQGSANNNHNNNNHNNSSSNNGGSANSLPNCNSGSATIGGGGSQTNGGQPPMSNGIIQDLSLPKAERKSDVPKLMNGDLSNDKLDFKKDSSTSVPESFSEAMKHAGSAFSLVRPKTETSSTSASSSPLGNSILPPEDFSPSASVSPLQRMASITNSLISQPPTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGPTQIPPTSLGKPLPPTNCGKVTSMMDQLKSENTSSVERASLPHPFLHQTPPQVHPPPPSPIFSNSTSHQLSPMEHFKKYNLSAPNHQPVNVLSPSHNLNALRNIGQHISPSVYEMAALTQELDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSHNIERLQALKSERREQNKRRRGSGQDNSSDTSSNDTSEFYASSANSPPSAAKKQRVLFSEEQKEALRLAFALDPYPSVATIEFLANELSLASRTITNWFHNHRMRLKQQSPHANEPQMNREPQSSGFDPVQFRLLLSQRLGFSALSLPFPNPYFQPNQELAALMSRNMIPTSEQLSGLDLSLKRDMNSDDDDDDMDNDSHLDSDDSGDERDAVPEVTPSIIESRSSRRKPAAPQWVNPDWQEESEVIINGVCVMQTDDFPSTERQRENETVRVEPKPALDRADLPDAENEKSEEMDTGEETAANEDEKSKEDNPDIKEEAHSSSDAENECEMSRTGEENNSNTKDEEKWEDNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00005193;
90% Identity
iTF_00170555;
80% Identity
iTF_00170555;