Zqui000642.1
Basic Information
- Insect
- Zygothrica quintamaculata
- Gene Symbol
- -
- Assembly
- GCA_037044455.1
- Location
- JBAMBS010000185.1:4363-5946[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-17 1e-13 51.0 0.0 2 45 358 401 357 401 0.95 2 3 0.083 1.8e+02 2.2 0.0 28 37 431 440 430 443 0.93 3 3 2.6e-20 5.8e-17 61.4 0.0 2 41 467 506 466 508 0.96
Sequence Information
- Coding Sequence
- ATGGGCCACTCGTCCACCATAATGGATATACAGCGCGTCCTGCTCAGCCAGCAAACCAACAACCAAAGCTGCGAAGTATTATTGGTGGCCAAAGACGGTATCAGTGTGCGGGCTCATCTTTTCGTATTAAGCACATGCAGCGACCTAATGCGCAATTTGTTAATCGATTTACCTGTTGGCCAGGAAGCAACTGTTATTTTACCAGATATTCGCGGCGAACTTCTAGAGAGTATGTTGTCATTTATTTACATGGGTGAAACCAGTTTACCCTCTGCTCTGTTGACTGAATTTTTGGAAGCTATCAATCTATTGGGCATAAAATCGGCAATTAGTTTTGAAACAAATCCAACGTCTATGACCACTTCGGATGTTGTGAGTGATGCAATGGCACTAGAAGCAGCTAAGTCAATATCAGGTCTACACATTGCAAGTGCAGATTTAATGGGAGATGAGGATGAAGAAGACGATAATACTGGTGGAGTGGTTGGTAAAATCGAGGTGGGTAACAGTGTACTATctgacacacagacacaggaACAGGAGGGTCGCGCACTGGAATTTCTTAATGTATACAGCGATCAGCCAAAAATAACATACTCCATTGAACACATGGATGGCACATCAAGTGGAAATCAATACATATTGACCGAAAACACTGGCACATTTACCATAACACAATCTACTTCTGTTAGTAAATTGGAAGGATCAGAAGGATCGACAGTTACTGGTGGTGTATTAGCAGACGAAGAtggtgatgttgatgatgaatCGGAATCACAACTGATTGAAGAGGAATTTATCGCTACAGCAGGACCCTTAATTGAAATGGGTACGGATGTAGACGCGGATGTAGATATTAATGAAGATGCAATACTTGATGCTGATGCCGgagaggatgatgatgatgaggaagACGAGCTGTTAGATGTAAAACCAAGAAAATCTCAGCTTGAtatgaaaatgataaaaaaacgACAGCAGCGACCCCCCGGACCaaaatctacaaaaaaaacaataacaaaacagcatcaacaattTGCTGCATTCAAAAGAGAAATCAAAGATGATATTAATGATGCACTGGACTTGGCAGCAGAGGCTGTACTACATGAGGGACTTAGTCTTCAAAAGGCCGCCGATCGTTATGACATATCAAAGACCGTATTATGGCGAAGAGTTCGCTCCAATCCAGCCTATATGAGGATTAAACGAGAGAAACCATGCCTATCGGAGGCGTATGAACGTTTGAAAAATGGTGACTCATTAAAAAGTATTAGCCAAGATCTACATATACCCATGTCTACACTACATCGCCATAAGGTTCAGCTAGGGCAACAGGGTCGATTACCCGATTTTGTTGCATGCCGCCGTCGGGACACTACCCCAAAAGATGAGTTACGCGACAAGTTAGCCAAAGCAGTGCATGCCTGCCTTAATGGTGGCATGTCACAAAATCATGCAGCGAATCTTTTTGAAATACCCAAAAGTACGCTCTGGCGGCATATACAGCGGCGTGTTAACGAGGCAGAACGCAAAGTCAAAGAGGAGCAGGAGGAAGAAGATGAGGAAGATGTTctcaactaa
- Protein Sequence
- MGHSSTIMDIQRVLLSQQTNNQSCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLIDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTSMTTSDVVSDAMALEAAKSISGLHIASADLMGDEDEEDDNTGGVVGKIEVGNSVLSDTQTQEQEGRALEFLNVYSDQPKITYSIEHMDGTSSGNQYILTENTGTFTITQSTSVSKLEGSEGSTVTGGVLADEDGDVDDESESQLIEEEFIATAGPLIEMGTDVDADVDINEDAILDADAGEDDDDEEDELLDVKPRKSQLDMKMIKKRQQRPPGPKSTKKTITKQHQQFAAFKREIKDDINDALDLAAEAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPCLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVQLGQQGRLPDFVACRRRDTTPKDELRDKLAKAVHACLNGGMSQNHAANLFEIPKSTLWRHIQRRVNEAERKVKEEQEEEDEEDVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01570341; iTF_00805103; iTF_00805298; iTF_00803711; iTF_00803520; iTF_00805886; iTF_00806088; iTF_01556224; iTF_01556043;
- 90% Identity
- iTF_01570341;
- 80% Identity
- iTF_01570341;