Zmor005501.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zophobas morio
Gene Symbol
-
Assembly
GCA_027724725.1
Location
JALNTZ010000004.1:13395627-13411748[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.9e-05 0.0018 19.8 1.8 1 23 133 155 133 155 0.99
2 16 0.0012 0.07 14.8 8.3 2 23 162 183 162 183 0.97
3 16 0.00038 0.023 16.3 3.8 1 23 190 212 190 212 0.97
4 16 0.0024 0.14 13.8 1.4 1 23 279 301 279 301 0.99
5 16 3.7e-05 0.0022 19.5 6.2 2 23 308 329 308 329 0.98
6 16 0.00024 0.014 16.9 4.5 2 23 346 368 345 368 0.97
7 16 0.00015 0.009 17.6 2.6 1 23 439 461 439 461 0.96
8 16 0.00063 0.038 15.6 1.1 1 23 467 490 467 490 0.93
9 16 3.8e-06 0.00023 22.6 0.8 1 23 495 517 495 517 0.98
10 16 3.8e-07 2.3e-05 25.8 1.5 2 23 528 549 527 549 0.97
11 16 4.8e-08 2.9e-06 28.6 0.8 1 23 556 578 556 578 0.98
12 16 5.7e-05 0.0034 18.9 1.6 3 23 590 610 588 610 0.92
13 16 0.00052 0.031 15.9 5.1 1 23 616 638 616 638 0.99
14 16 6.5e-05 0.0039 18.7 3.1 1 23 644 666 644 666 0.98
15 16 5.1e-06 0.0003 22.2 0.2 1 23 672 694 672 694 0.99
16 16 0.00022 0.013 17.0 0.1 1 23 700 724 700 724 0.93

Sequence Information

Coding Sequence
ATGATTAATAAAACGACCGAGTTGGTTATAGACAAAATCTGTCGTTCTTGCATGTGCCAAAATGAGAATATGCGAAATGTATTCGATTCAAAAGAACTCGGCGGCCAAACTTTGCAACTCGCTGAAATGTTAATGGATTGTGCCGCCGTCGTCGTCGCCTCAGGAGATGGTCTTCCGAACCTGTTGTGTGTGAACTGTGAGAACAAACTCAACCTAGCATACGAGTTCAAACAGCAATGCCAAAAATCAGACTCCACGCTGCGGGAGTTGACCAATCAGAGCGACTCTGTGATCAAGGAGGAGTCCTGCGACATCGTAGTCCAGCCAGACTTTAACATTCCGGAACTGTACAATGACTCTGACAGTGATGAAGACGACGATAAGCGGAAGTCGTCTTTCACTTGCCCGTTCTGTCAGAAGGTGTTGAGGACCAAGAAGGGGCTGCGGATCCACCAGAGGCGCCACACTGGGGACAAGCTGCGCTCGTGTCACATGTGCAATGCTCAGTTCACGAGGACTCACCACTTGATTAGGCATATGAAGACGCACGTGAAGAGTGACGCCGGACATGTGTGTGCTGAATGTGGGAGGTCTTTCATGAAGTTGAGCCACTTGCTGTCGCATAAAAAGACACATAAATCGGACGAGAAGAGCGACGAGGGCGAGAATGGACAGCAGAGTGCGTCGGCGGAGATTCAGAGTGACGGCGACAACGAGGAGGTCACTTTGGAGATTCACGATGAGGATGACGAGGACGAGGACGAGGAGGAGGACGATGTGTTGGAGGAGTACTTTAAGCCGAAAGCGAGACCCACGAAGAAGGATAAGGGGACGTATGAATGTAAATACTGTTATAAAATTATGACGACGTTTGTGGGGTTGAAGATTCACATGAGGCGGCACACGGGGTCGGATCTTGCTAAGTGCAAACTTTGCGAGAAAAGCTTCACGAAAACGAGCCACCTGAAGCGCCACCTCCAAACCCACGGCATCAAAGAACTAGAGAAACCAAAGCCGGTCGAAAAGAAAGTGATGGAATGCGAATTCTGCGACCGTAAATTTAAGTATAAGAAAAGCTTTAATCATCACATGCAAACCGAGCACGGTATGTCCGACGAGAGCGACGTACCCCTCAGCACGTACATCTCGAAAATCAACAGCAGCAAAGAGGAAGAAAACGCCAAAGACGACGAACCGCAGGAGGAGAAACCGGACAAAGAAAAAGAAGAGAAACCGCAGGAGCCGGAATCGTCGGTTTCGGACGCGGAAACGAAGGAGGACATTCCGCCCGTCAAGTCCACACATCACAAAGTACACGTATGCCACGTGTGCGAAGCCGCCTTCGCAAGGGCCAACCACCTCACACGTCACATGACCCTTCATAGGGCGCTCTTGATACACAAGTGCGATCGGTGCGATAAAGCGTATGCGACTTTGGAGCATTTGGCGAAGCACGTGGAGGAAGACCATATTAACAAGCCCTACGCTTGCACGATCTGCAATAAGCCCTTCAGTAGAGGGGAGCATTTAATAAGGCACTTGAAGGTCCACCAGACCGGGAACGAGAAGGAGGATAATTTGACGTGTTCGATATGCGAGAAGACGTTCAGCAGGTCCGACCATCTGGCGCGACATATTAAAATACATTTACTGCAGGATAAAAGACACGTTTGTCCTGAGTGTGGTAAGGCGTTTAATAGACTGGATAATCTTAAGACTCACCAGAGGATTCACACTGGGATTAAGGATACGACGAAGTTACATTTGTGTATTTATTGTGGCAAGGAGTTTAATAATTCGAGCAATATGattgttcatatgaggcgtcataccggcgagcgtccgtataagtgtagccagtgcgggaaaggttttccgagatcgcacgaccttaaatgtcacgagaggacgcactcaggggaaaaaccatatcattgcgcgttgtgcggaaagtcgttcaaTAAAAGCAATAAGTTGttacgccacacccgcgtccacaccggcgagcggccatacgtctgcaacatctgcgcccgcgccttcacccaatccaacgacctggctctgcacatgcgccgccacacgggggcgcggccctacgcttgcggcatgtgcCCCGCCCGCTTCATCCAATCGGGCCAGCTCAAGGCCCACCGCCGCACCACCGGCCACTGGGTGGAGACGCAGCCCGACCTCAAGGGCGGACACCGAGTGGAGCCCGTCACGCCCGTCGTCGAGCCCACGCCCATCCGCTTCAAGACCCACGGCAAGCCCAAGAAGGAGGACGACCTGGAGGAGACCAAGAACGTCAAGATCCTCGCCCACTCGATGGGCTTGATGGGGCCGCTGAGTGTCTCCGGCGAGAACCTGGTGCTCGATCCGAAGATCGTCGAGCTGCAGAACTCGGGACTGATCAACTTGGTGGGAGGTGGGGGGGAGATCAAGTTCAAGACGGACAGTGGGGGGCAGTTCGTGGTGTCGCCGGTCAAAAGCGAGATGGGCGTGGCCAAGGGGCACGAGATGGGTGGGGCGAAGGGGCACGAGGTGGGGGCGCAGGCGGCGTTCCAGCAGGGGGTTTCTTCGGTGACGTATTCGATAGTGGCGCCGGTGGCCAGTTCGACGACGTTCACGGCGACGGATTATAGTAATTATCAGAATTTCGGGTGA
Protein Sequence
MINKTTELVIDKICRSCMCQNENMRNVFDSKELGGQTLQLAEMLMDCAAVVVASGDGLPNLLCVNCENKLNLAYEFKQQCQKSDSTLRELTNQSDSVIKEESCDIVVQPDFNIPELYNDSDSDEDDDKRKSSFTCPFCQKVLRTKKGLRIHQRRHTGDKLRSCHMCNAQFTRTHHLIRHMKTHVKSDAGHVCAECGRSFMKLSHLLSHKKTHKSDEKSDEGENGQQSASAEIQSDGDNEEVTLEIHDEDDEDEDEEEDDVLEEYFKPKARPTKKDKGTYECKYCYKIMTTFVGLKIHMRRHTGSDLAKCKLCEKSFTKTSHLKRHLQTHGIKELEKPKPVEKKVMECEFCDRKFKYKKSFNHHMQTEHGMSDESDVPLSTYISKINSSKEEENAKDDEPQEEKPDKEKEEKPQEPESSVSDAETKEDIPPVKSTHHKVHVCHVCEAAFARANHLTRHMTLHRALLIHKCDRCDKAYATLEHLAKHVEEDHINKPYACTICNKPFSRGEHLIRHLKVHQTGNEKEDNLTCSICEKTFSRSDHLARHIKIHLLQDKRHVCPECGKAFNRLDNLKTHQRIHTGIKDTTKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSQCGKGFPRSHDLKCHERTHSGEKPYHCALCGKSFNKSNKLLRHTRVHTGERPYVCNICARAFTQSNDLALHMRRHTGARPYACGMCPARFIQSGQLKAHRRTTGHWVETQPDLKGGHRVEPVTPVVEPTPIRFKTHGKPKKEDDLEETKNVKILAHSMGLMGPLSVSGENLVLDPKIVELQNSGLINLVGGGGEIKFKTDSGGQFVVSPVKSEMGVAKGHEMGGAKGHEVGAQAAFQQGVSSVTYSIVAPVASSTTFTATDYSNYQNFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01410159; iTF_01481083; iTF_01480297; iTF_00753176; iTF_00415299;
90% Identity
-
80% Identity
-