Basic Information

Insect: Zonitis immaculata
Gene Symbol: -
Assembly: GCA_037414775.1
Location: JAZBGX010000484.1:3155-5191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5e-06 8.4e-05 22.5 0.3 1 23 186 208 186 208 0.98

2 12 0.00065 0.037 14.2 1.8 1 23 214 236 214 236 0.97

3 12 3.3e-05 0.0019 18.3 3.6 1 23 242 264 242 264 0.98

4 12 0.00013 0.0075 16.4 1.4 3 23 278 298 276 298 0.95

5 12 1e-05 0.0006 19.8 0.3 2 23 305 326 304 326 0.97

6 12 3.3e-07 1.9e-05 24.6 2.3 1 23 332 354 332 354 0.98

7 12 2.4e-06 0.00014 21.8 0.1 1 23 360 382 360 382 0.96

8 12 1.9e-06 0.00011 22.1 0.1 1 23 388 410 388 410 0.98

9 12 2.2e-07 1.3e-05 25.1 2.6 1 23 416 438 416 438 0.99

10 12 5.1e-06 0.00029 20.8 3.1 1 23 444 466 444 466 0.98

11 12 3.5e-07 2e-05 24.5 0.7 1 23 472 494 472 494 0.97

12 12 2.3e-05 0.0013 18.8 0.4 1 21 500 520 500 521 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5e-06	8.4e-05	22.5	0.3	1	23	186	208	186	208	0.98
2	12	0.00065	0.037	14.2	1.8	1	23	214	236	214	236	0.97
3	12	3.3e-05	0.0019	18.3	3.6	1	23	242	264	242	264	0.98
4	12	0.00013	0.0075	16.4	1.4	3	23	278	298	276	298	0.95
5	12	1e-05	0.0006	19.8	0.3	2	23	305	326	304	326	0.97
6	12	3.3e-07	1.9e-05	24.6	2.3	1	23	332	354	332	354	0.98
7	12	2.4e-06	0.00014	21.8	0.1	1	23	360	382	360	382	0.96
8	12	1.9e-06	0.00011	22.1	0.1	1	23	388	410	388	410	0.98
9	12	2.2e-07	1.3e-05	25.1	2.6	1	23	416	438	416	438	0.99
10	12	5.1e-06	0.00029	20.8	3.1	1	23	444	466	444	466	0.98
11	12	3.5e-07	2e-05	24.5	0.7	1	23	472	494	472	494	0.97
12	12	2.3e-05	0.0013	18.8	0.4	1	21	500	520	500	521	0.93

Sequence Information

Coding Sequence: atggatATGAGTGTATATTTAACAGCTcctttacaattagataaaatatgtAGGGCTTGTTTAACCGAAAAGGGTGATATGAGACCTTTGTTTGGTGCTTGTCTAGATGAAATGCTCCTATCATTTGCTTCAATTCAggTACAAGAAGGTGATGGTTTGCCCAATTTGATGTGTGTACAATGTGTTCTACAATGTAGTCGAGCTTATACATTTAAACAACAATGTGAAAAATCGGATACAATATTACGACAATATATAAATCCggaatttcaaaaacaattaactGATTCATTGaatgaacaacaaattaaaaacgaattacaagaacaattacaatttcccGATACTATAACGAATGTTGTTATTGAAGAAAGTGGTAGTATAACAGCTGAATTTGTAccatataatgataatattgttgaagTCAAACaagatttatatacaatagaaacaacaaatgacgatacaaataatgaaattgataatacatCAGATGAACAACAAGAACACAATCATGAACAACTAATGTcacaatcacaacaacaaaaattgaaatatcctTGTACAAAATGCGATGCATCATTTTCGTTGAAAGTCGACCTAaaagtACATATGATGACACATCCGAAAGATTTAGATCATGTTTGTCATGTTTGTAATAAAGCATTTATTGAAGCGCGCATATTAAAACGGCATTTGAAAATCCATTTAGATAAGAAACCGCATCAGTGCGACCAATGTAATATGTCATTTGCGGAAAGTTCGAATTTGAGTAAACATAAAAAGAAACATACAGGTGAATTACGGAATATTACAGGTAAACCACATTTATGTTCAGTATGTGGTAGAGCATTCAAATGGGCATCTAGTCTATCTAAACATATGAAATATCATACTGGTCATAAATTATTGTCGTGCAATTATTGTGGGAAACAATATGTTGAAgCTCGAAGTTTACGAATTCATATACGTTCACATACTGGTGAACGTCCGTATGTTTGTGATGTTTGCCAAAAAACTTTTACACAATTGTGTAATTTAGAGAAACATTTACGTGTACATACTGGTGAAAAGCCGTTTTTATGTCCCATCTGTGGCAAAGGtttTACTCAATCTGGTTATGTAGGAATACATATGCGAACACATACCGGTGTACGTCCTTATGTATGTCAAACTTGTGGTAAAGCATTTGCTGGATCTAATACATTAACAATCCATCAACGGATACATACCGGTGAAAAACCTTACACTTGTAATATGTGTGGTAAATCATTTAGTCGTCATGAAACATTAATTATCCATACACGTTCACATACAGGCCATAAACCGCATGTATGTAACGTATGTAAAAGAGGTTTTACATCGTCCGGACATTTATCTGGTCATATGAGGACGCATACTGGTGAAAAACCGCATGTTTGCAATATTTGCGGGAAAAAATTTGCAGGTTCGAGCAGTTTAAAAGTACATGTTCGTAGTCATTCCAGTGAACGGCcgtttatttgtaaattctgTGGTAAAAGTTTTACACAATCGGTGTTATTCCAGGAACATTTAGCAACTTATACGcaaattgttgatgataagaATGATATAACTAAGATTGAAACTGTTAAAGTTTCCGATTTgatAACGACTGACGATCATGTTCATACGCTACAAGTTAGTATTAGTAAAGACGAAAAATAA
Protein Sequence: MDMSVYLTAPLQLDKICRACLTEKGDMRPLFGACLDEMLLSFASIQVQEGDGLPNLMCVQCVLQCSRAYTFKQQCEKSDTILRQYINPEFQKQLTDSLNEQQIKNELQEQLQFPDTITNVVIEESGSITAEFVPYNDNIVEVKQDLYTIETTNDDTNNEIDNTSDEQQEHNHEQLMSQSQQQKLKYPCTKCDASFSLKVDLKVHMMTHPKDLDHVCHVCNKAFIEARILKRHLKIHLDKKPHQCDQCNMSFAESSNLSKHKKKHTGELRNITGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLSCNYCGKQYVEARSLRIHIRSHTGERPYVCDVCQKTFTQLCNLEKHLRVHTGEKPFLCPICGKGFTQSGYVGIHMRTHTGVRPYVCQTCGKAFAGSNTLTIHQRIHTGEKPYTCNMCGKSFSRHETLIIHTRSHTGHKPHVCNVCKRGFTSSGHLSGHMRTHTGEKPHVCNICGKKFAGSSSLKVHVRSHSSERPFICKFCGKSFTQSVLFQEHLATYTQIVDDKNDITKIETVKVSDLITTDDHVHTLQVSISKDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01014865;
90% Identity: iTF_01022403; iTF_00929764; iTF_00987304; iTF_01366501; iTF_00842035;
80% Identity: -