Zimm008448.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- LZTR1
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010002873.1:7494-11263[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-13 5.3e-11 42.4 0.1 2 105 357 479 356 495 0.82 2 4 0.0065 1.3 8.9 0.1 77 109 495 527 487 528 0.88 3 4 9.4e-18 1.9e-15 56.7 0.0 10 96 590 676 584 691 0.81 4 4 2.3 4.6e+02 0.7 0.0 76 101 690 715 682 723 0.79
Sequence Information
- Coding Sequence
- atgagtAGTTTAACAATTTTGGATGATACTGCCCTTTATGATAATGCATTAACATTAGAAATTGGGCCTTTAGAAACTGTGCACCGTTGGCGTCGTATGCCTGAATGCGATGAATTCGTTGGTGCcagACGTAGCAAACATACAGTTGTCGCTTATAAAGGTGCAATTTATGTATTTGGTGGTGATAATGGTAAAAGTATGTTGAATGATCTGATAAGATTTGATGTGAAAGAGAAATCATGGGGTCGTGCTTTTGCTAATGGTACACCACCAGCACCACGTTACCATCATTCAGctgttgtttataaaaattcaatgtttGTATTTGGTGGTTATACAGGCGATATACattcaaattcgaatttaacaaataaaaatgatttgttCGAATATAAATTCCATTCAGGACAATGGATTGAATGGCGATTTCATGGTACAACACCTGAACCACGATCGGCACATGGTGCTGCtgttttcgataataaattatggatATTCGCCGGTTATGATGGCAATGCCCGTTTAAACGATATGTGGGCAATCTCATTAACTggTGATAGTCGGAATTGGAttaaaatccaacaacaagGTGAATGTCCACCGACTTGTTGTAACTTTCCTGTAGCGGTAGCAAGAGAAAGGATGTACGTTTTTAGTGGTCAAAGTGGGGCACAAATCACCAATTCTCtattccaattcaatttcaatactttaacTTGGACTCGAATTAGTACGGATCATATAATCCGTGgtacaccaccaccaccggcACGTCGTTATGGTCATACAATGGTAGCTTTCGGTCGACATTTATATGTGTTTGGTGGTGCTGCTGATAGTACATTATCGAATGATTTACATTGTTTCGATTTAGATACACAAACATGGTCGACTATTTTACCAGCACCGGATAGTTTCGTACCATCTGGACGTTTATTTCATGCCGCTGCTGTTGTAGACGATGCAATGTTTGTTTTTGGTggtacaattgataataatgtgcGTAGTGGCGAAATGTATCGTTTTCAATTCTCTTGTTATCCAAAATGTACATTACACGatgattttggtaaattattaagaaCAAATGAATTCCATGATGTCCAATTTTCGGTTggtattgaaaaaaagaaaatttttggaCATATGGCAATTATAGCATCAAGATCATCATATTTACGGacattattaaagaaaaacaaacagaaacGTGATAATCatttagagaaattatttGGTACAGTTAATGTACCGTTTAAAGAAGTACCATTGgtggaaattgaatttcccGATGCTAATCCGGAAGCATTTGAATTAGTTctagattatatttatatggattGTATTGATCCAACGAAAAAAGGCGATAATCTATCAACAACATCAGCTGGTCATGTATTGCGTATGATGGATGTTTATCGATTGGCTGTTGAATTTGGTATTGTACGACTCGATCATTTATgtgttcaatatttaaattcatcgataaataaaaataatgtattgGAAGTATTGGAATCAGCgcacaatttaaaattgaatgtgATCAAAGATCATTGTTTGCGATTCATCATAAAAGAATCGAACTATAATGATATTGTTATGTCGACGAAATTTGAAACGTTAAGTAGTCGATTGATTGTCGAAATAATCCGATTAAAACAAACATcaaatggtaataaaacatACGTTGAACATACAAATGAATTAGGTGGTTCAACTTTAGAACAAGATATGGCATCATTTTTGGTATGCCATGGTACCCCATTCTATGATGTCGATCTAATATTAGATTCGCATATAATACCAGCACATAAGGCAATTCTAGCTGCTCGTAGTGGTTATTTCGAAGCATTATTCCGATCATTTATGCCACGTGATTCGAAAGTTAAAATACAAATTGGCGAAATGATACCATCATTACAATCATTCCATTCATTATtgcgttttatttattgtggtGATGTTAATATGCCACCAGAGgattctttatatttattttcggcaccattattttatagtttcacTAATAATCGTTTACAAGCTTattgtaaacaaaatttagaaatgaatgtttcatttgaaaatgttGTACAAATATTGGAAGCTGCCGATGGTATGCAGGCGACTGATATGAAGAAATACGCATTAGATTTAATTGTACATCATTTTACGAAAGTCGCAAAACTACCAAGACTGAGATTATTGAGTaaagaattaattttagatattttaatgGCTTTAGCTAATGATATGAGCGAATCGAAACTATGCCAAGAT
- Protein Sequence
- MSSLTILDDTALYDNALTLEIGPLETVHRWRRMPECDEFVGARRSKHTVVAYKGAIYVFGGDNGKSMLNDLIRFDVKEKSWGRAFANGTPPAPRYHHSAVVYKNSMFVFGGYTGDIHSNSNLTNKNDLFEYKFHSGQWIEWRFHGTTPEPRSAHGAAVFDNKLWIFAGYDGNARLNDMWAISLTGDSRNWIKIQQQGECPPTCCNFPVAVARERMYVFSGQSGAQITNSLFQFNFNTLTWTRISTDHIIRGTPPPPARRYGHTMVAFGRHLYVFGGAADSTLSNDLHCFDLDTQTWSTILPAPDSFVPSGRLFHAAAVVDDAMFVFGGTIDNNVRSGEMYRFQFSCYPKCTLHDDFGKLLRTNEFHDVQFSVGIEKKKIFGHMAIIASRSSYLRTLLKKNKQKRDNHLEKLFGTVNVPFKEVPLVEIEFPDANPEAFELVLDYIYMDCIDPTKKGDNLSTTSAGHVLRMMDVYRLAVEFGIVRLDHLCVQYLNSSINKNNVLEVLESAHNLKLNVIKDHCLRFIIKESNYNDIVMSTKFETLSSRLIVEIIRLKQTSNGNKTYVEHTNELGGSTLEQDMASFLVCHGTPFYDVDLILDSHIIPAHKAILAARSGYFEALFRSFMPRDSKVKIQIGEMIPSLQSFHSLLRFIYCGDVNMPPEDSLYLFSAPLFYSFTNNRLQAYCKQNLEMNVSFENVVQILEAADGMQATDMKKYALDLIVHHFTKVAKLPRLRLLSKELILDILMALANDMSESKLCQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753081;
- 90% Identity
- iTF_01366420; iTF_00841932; iTF_00813805; iTF_01022310; iTF_00929671; iTF_00814490; iTF_00753081; iTF_00167719; iTF_00078697; iTF_01480237; iTF_00415215; iTF_01329903; iTF_00870674; iTF_01481014; iTF_01283511; iTF_01568120; iTF_01278271; iTF_00987228;
- 80% Identity
- -