Mvar003304.1
Basic Information
- Insect
- Mylabris variabilis
- Gene Symbol
- LZTR1
- Assembly
- GCA_037464815.1
- Location
- JAZBGW010000920.1:14538-17016[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-12 6e-10 39.2 0.1 1 105 356 491 356 496 0.78 2 4 0.0013 0.31 11.2 0.1 78 109 496 527 487 528 0.86 3 4 4.9e-19 1.2e-16 60.8 0.0 10 104 590 686 583 692 0.82 4 4 4.2 9.9e+02 -0.1 0.0 76 101 690 715 685 723 0.78
Sequence Information
- Coding Sequence
- atgAGTAGTTTAACAATATTAGATGACGCTGCCCTTTACGATAATGCGTTAACATTGGAAATAGGGCCGTTAGAGACGGCCCACCGTTGGCGACGTATGCCCGAATGCGACGAATTCGTGGGGGCCAGACGCAGTAAACATACAGTAGTCGCCTATAAAGGTGCAATCTACGTATTCGGCGGTGATAACGGTAAAAGTATGTTGAATGATCTGTTGAGATTCGATGTGAAGGAGAAATCATGGGGCCGAGCGTTTGCTAATGGTACACCACCAGCACCGCGCTACCATCATTCGGCTGTTGTTTACAAGAATTCAATGTTTGTATTCGGCGGTTATACAGGCGATATACATTCGAATtcgaatttaacaaataagaacGATTTATTCGAGTACAAGTTTCATTCGGGGCAATGGATTGAATGGCGGTTCCATGGCAAAACACCCGAACCTAGATCGGCACATGGTGCTGCCGTTTTCGATAATAAACTGTGGATATTTGCTGGTTACGATGGGAATGCCCGTTTAAATGACATGTGGACGATCTCATTATCTggcGATAGTAGGAATTGGATTAAAATCCAACAACAGGGTGAATGTCCGCCAACTTGTTGTAATTTCCCTGTAGCCGTAGCTAGAGAACGGATGTACGTTTTCAGCGGACAAAGTGGGGCACAAATCACCAATTCTCTATTCCAATTCAACTTCAGTACACAtacTTGGACACGTATAAATACGGATCATATAATCCGTGGAACGCCACCACCACCGGCGCGCCGTTATGGCCATACAATGGTGGCATTCGGTCGTCATTTATATGTGTTCGGTGGGGCGGCTGATAGCACGCTATCAAACGATCTACATTGTTTCGATTTGGATACACAGACATGGTCGACAATACACCCAGCACCGGACAGTTTCGTACCATCTGGACGTTTATTTCATGCAGCAGCAGTTGTCGACGATGCCATGTTTGTTTTCGGCGGTACAATCGATAATAATGTACGTAGCGGTGAGATGTATCGTTTTCAATTCTCTTGTTATCCAAAATGTACGCTACATGAAGATTTTggtaaattgttgaaaacgaACGAATTCCATGATGTACAATTTATTGTCGGTgcagaaaagaagaaaatctaCGGACATATGGCAATTATAGCGTCACGTTCAGTATATTTACGAacattattaaagaaatataaaCAGAAACGTGATAATCATTTAGAGAAATTATTTGGTACGGTTAATGTGCCGTTTAAAGAGGTACCATTAGTTGAAATCGAATTTCCCGACGCCAATCCGGAAGCATTCGAATTAGTCTTGGATTATATTTATATGGATTGTATTGATCCAACAAAGAAAGGCGATAATCTATCACCGACATCAGCTGAACATGTTCTACGTATGATGGACGTATATCGTTTAGCTGCCGAATTCGGTATTGTACGTCTCGATCATTTGTGTGTACAATATTTGAATTCggcaattaataaaaataacgtaTTAGAAGTGTTGGAGGCGGcacacaatttaaaattgaacgtAATCAAAGAtcattgtttgaaatttattataaaagattCCAATTACAACGATATTGTAATGTCGACGAAATTTGAAACGTTAAGTAGCCGAttgattgttgaaattatacGTTTGAAACAAACATCAAGTGGTAATAAAATAAGCGTTGAACATCCGAACGAATTAGGTGGTACAACATTAGAACAGGATATGGCATCGTTTTTAGACAGTCATGGTACGCCGTTCTATGATGTTGATTTAGTTTTAGATGGCCATATAATACCGGCACATAAAGCAATATTAGCTGCACGTAGTGGATATTTTGAAGCGTTGTTCCGATCGTTTATGCCGAGAGATTCAAAAGTTAAAATACAGATTGGTGAAATGGTACCATCATTACAATCATTCCATTCGTTATTGCGTTTCATTTATTGTGGTGATGTTAATATGCCACCAGAAGATTCATTGTATCTGTTTTCAGCACcattattttatagtttcacAAATAATCGTTTACAAGCattttgtaaacaaaatcTAGAGATGAATGTATCATTCGAGAATGTTATACAAATATTGGAAGCTGCTGATGGAATGCAAGCGACTGATATGAAAAAATATGCTTTAGATTTAATCGTACACCATTTTACAAAAGTAGCAAAACTACCAAGACTGAGATTGTTGAgtaaagaattaattttagatattttaatgGCATTAGCTAACGATATGAGTGAATCGAAATTGTGCCAGGACGTCTCATCGGCCAGTCTCTCAACTGATAgcaattga
- Protein Sequence
- MSSLTILDDAALYDNALTLEIGPLETAHRWRRMPECDEFVGARRSKHTVVAYKGAIYVFGGDNGKSMLNDLLRFDVKEKSWGRAFANGTPPAPRYHHSAVVYKNSMFVFGGYTGDIHSNSNLTNKNDLFEYKFHSGQWIEWRFHGKTPEPRSAHGAAVFDNKLWIFAGYDGNARLNDMWTISLSGDSRNWIKIQQQGECPPTCCNFPVAVARERMYVFSGQSGAQITNSLFQFNFSTHTWTRINTDHIIRGTPPPPARRYGHTMVAFGRHLYVFGGAADSTLSNDLHCFDLDTQTWSTIHPAPDSFVPSGRLFHAAAVVDDAMFVFGGTIDNNVRSGEMYRFQFSCYPKCTLHEDFGKLLKTNEFHDVQFIVGAEKKKIYGHMAIIASRSVYLRTLLKKYKQKRDNHLEKLFGTVNVPFKEVPLVEIEFPDANPEAFELVLDYIYMDCIDPTKKGDNLSPTSAEHVLRMMDVYRLAAEFGIVRLDHLCVQYLNSAINKNNVLEVLEAAHNLKLNVIKDHCLKFIIKDSNYNDIVMSTKFETLSSRLIVEIIRLKQTSSGNKISVEHPNELGGTTLEQDMASFLDSHGTPFYDVDLVLDGHIIPAHKAILAARSGYFEALFRSFMPRDSKVKIQIGEMVPSLQSFHSLLRFIYCGDVNMPPEDSLYLFSAPLFYSFTNNRLQAFCKQNLEMNVSFENVIQILEAADGMQATDMKKYALDLIVHHFTKVAKLPRLRLLSKELILDILMALANDMSESKLCQDVSSASLSTDSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753081;
- 90% Identity
- iTF_01566332;
- 80% Identity
- -