Basic Information

Insect: Zeugodacus cucurbitae
Gene Symbol: -
Assembly: GCA_028554725.2
Location: CM053019.1:46423737-46427988[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00032 0.042 15.4 1.0 1 23 186 208 186 208 0.95

2 15 0.0015 0.2 13.2 2.3 3 23 216 236 214 236 0.95

3 15 0.0013 0.17 13.4 0.1 1 23 380 402 380 402 0.97

4 15 0.0035 0.46 12.1 0.3 1 23 408 430 408 430 0.98

5 15 2.7e-05 0.0036 18.7 1.6 1 23 462 484 462 484 0.98

6 15 0.0097 1.3 10.7 0.3 1 23 500 522 500 522 0.94

7 15 0.024 3.1 9.5 0.4 1 23 528 551 528 551 0.97

8 15 0.31 41 6.0 0.3 5 19 562 576 559 577 0.91

9 15 0.00018 0.024 16.1 5.6 1 23 586 608 586 608 0.97

10 15 0.078 10 7.8 0.4 3 23 615 635 613 635 0.96

11 15 1.1e-05 0.0014 20.0 0.3 1 23 643 665 643 665 0.98

12 15 0.0054 0.71 11.5 0.2 3 23 673 693 671 693 0.97

13 15 0.00017 0.022 16.2 0.8 1 23 699 721 699 722 0.95

14 15 0.11 15 7.3 0.1 1 23 732 754 732 754 0.97

15 15 0.018 2.4 9.8 0.0 1 20 1282 1301 1282 1304 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00032	0.042	15.4	1.0	1	23	186	208	186	208	0.95
2	15	0.0015	0.2	13.2	2.3	3	23	216	236	214	236	0.95
3	15	0.0013	0.17	13.4	0.1	1	23	380	402	380	402	0.97
4	15	0.0035	0.46	12.1	0.3	1	23	408	430	408	430	0.98
5	15	2.7e-05	0.0036	18.7	1.6	1	23	462	484	462	484	0.98
6	15	0.0097	1.3	10.7	0.3	1	23	500	522	500	522	0.94
7	15	0.024	3.1	9.5	0.4	1	23	528	551	528	551	0.97
8	15	0.31	41	6.0	0.3	5	19	562	576	559	577	0.91
9	15	0.00018	0.024	16.1	5.6	1	23	586	608	586	608	0.97
10	15	0.078	10	7.8	0.4	3	23	615	635	613	635	0.96
11	15	1.1e-05	0.0014	20.0	0.3	1	23	643	665	643	665	0.98
12	15	0.0054	0.71	11.5	0.2	3	23	673	693	671	693	0.97
13	15	0.00017	0.022	16.2	0.8	1	23	699	721	699	722	0.95
14	15	0.11	15	7.3	0.1	1	23	732	754	732	754	0.97
15	15	0.018	2.4	9.8	0.0	1	20	1282	1301	1282	1304	0.93

Sequence Information

Coding Sequence: ATGGACCGCCAAACCTTTGAAATACAATGGATACAAGATGACCAGGATGATCTTAAAACATCCAACGGTCAACTGCTTGTAAAACCACAAATATCGTCTGAAGATGAGCTTCTCGCCAACGATGCAGCTGGTGCGGGTAGAGGGACATACCACTTGGTTTCTGGTCATGATGAGGACGACAATGTACCAAATGAAGTAGATATCGATCAAATAGCTGCCGAAAACTTAATATTTATGGCGCGAGATGGCCAAATGGTAACAGAGATAATTGACGCCACTGCAGCTGATAATGGTACCGTTGTGGTCGCGACTTCAGATGAAATTGATTGTTCAGAAGTATTACAACACGCTGGAAATGGATTTATGGATAGTTTTGTCGATACTACACCGCAAATGGTAACAGAAGAAGTAATAACGGACGATTGGGTGCAACATCAAGGCGAAGAGCGCGTGGAAATACCAGCGGACCAAATAATTTGCTCAGGTTCACAAGTTTTACTGGATATGGAGGTGCCATTACCGACTGTTCAAGATGAGTACACTGCCCTACGTCCATACCCATGTGATTTTTGCAGCCGCCGATTTCGTAAGAAGACAAGTTTGATGAATCATATAGTTGCACATCAGAACGATCGACCACATTTGTGTAAACTGTGTGGCTCCCGTTTTTTCCGTCGTTCAGATCTAATAAATCACCTTAAAGCACATGCAGATGCACCAGATCCTGAATTAGAAACAGAATaTATGAACTTTGTGGagcaggaacaacagcaactgcaaaTGCGACAACCTAACGATCATTATTATGAGCAAGATTGGACCACACACATAAATTCCTTGCAACGTGGAGAGAAATCTAGTCGAAAACCGCATAATGTTAGCGGGAACAGTTCATCTACCTCAACATCCACGACAATAGGTCGTGGCCGTATTAGTCGAATTAAACCAAAAGAAGAAAGTTATGGTTTAAATGAGCCACATGAAAACGACACAGTAGGGTTGGCAAATTTAGAAAATCAGTCGAGTGCTTTTGAAGACTGTCAACAATTACAGGCCTCCACCGCAGTTGTGAAATTTACACAAAATCAATCACCAGCGCATCAAAAGAGTTTTCCCGTTATCGATGAAAGTAAACCATTTGTTTGCCAGCAATGTGGATTGGCATTTGCTCGAGAGAAGGCAATGTTAGCCCATACAAAGAATCATAGTGAAGATCACCCGCATGAGTGTAGCCAATGCAACGAGATGTTCTGGGATGCAGCTGGTCTACAGGAACATCTGAAAACTCATCAATTTGAAGATAGTAATTCGGAGTATGACCCCGATGAAGCGGAAGCTGAAGAAACACAAAGTGAATCTGAATCGGAACGCTTGTATGGGGAGTTTTACTGCAGCGAATGTGGTATGTCATTTCACAGAGAAGATTTGCTACGCAGACACGccaaaatacacacaaaaacgACTGCCGAATGTGGTATCGATAATGATAAGGATCGCCATTGTTGCAACACATGTGGCGAAACTTTTGCCGAGGCCTTAGATTTACTAGCGCACGCCGAAATACATGCGCGTTATCCACCATATAAGTGTGTTCTTTGTGGCGAGACCTTTTTCGAAGAGTTGACGATCAAACGTCATCTGCAGTCATTGCATCCACATGATATGACGCCGAACTCATGTATACTCTGTGGCAAAGAATGCCGCGATCGTAAAGCTTTAATAAAACATGCCTGGGATCATTCACGCGAAAAATGCCACTCGTGCTCAAAATGTGGCAAGAACTTTCACAACAAGGCACGTCTGAAACGGCATATGGCGTCACATCGCGATAAGTCGGTAATTTGCGACGTATGTCAAGAAGAATTCCCTGATGGCCGTACACTCTCCAACCATCGACACTCGCATACTAATGCTTCAGGTAAACTATTTCCCTGTAATGAATGCGGAAAAACGTTCGGTTCGCGCAGTTCGCAACAAATACATGTGCGCATACACACCGGTGAGCGACCTTATGGTTGCCGCTTTTGTTGGAAGGCGTTTGCTGATGGCGGCACATTGCGTAAACACGAACGTATACACACGGGCGAAAAACCTTACGCTTGTTCGGTGTGCTCACGTGCATTCAACCAACGTGTTGTGCTGCGCGAACATATACGATCTCATCACTCTGGATTGGATGCAAAGCGTAATACATACTACTGCAGCGTGTGTTCGATGGAAATGTCGTCATCTGGCGATCTCGTGCAACATCTGATACAACACAGTGATATGAACACTGCCATGCAGAGGCAACCAATTACTGGTCCTCGTAAGTACAAGAGGCGGCGAAAGTTGAAACCGCATGAAATCGCAAGGCTGCGCAGGGAAAGCCAACAAAATGGCAATGGAAGTGATATCGAAATATCAGACTTCGATATGGATAATGTGGATGACCTCTTAGGCATTGCAGATCCTATGCCGGTCTCCAAATCTTCAAAAGCCAAACGTAGCAAAGTCAAAGACAGCATCAATAATAATTCCTTGATGAAAGAAGGCGTAGACGGTGTTATATTGCCAGATAATGATATGCTTGTCGAACAGTCGAGGAAACCGCGTTATAAATATTCGGGTAGTAACTCGGATACCTTATGGCAGACAAAGCTCATCAATTCCAATTCGTTACTATCGAATTTAGAGAATACTTTGCAAAGTATCGACACACTCGTGGTAGGCTCTACGGCCAGCGGTGCCACACACTTAGATGCAGAAGAACGCAAACCGCGGTTCAAATCGGACAATGATATTAATACTGGCGGTTCACAGCGCACCCAGGAGGTACAGATCAGCAAGAACTATAATGCGAACAAAGCGCGAAAACGAACCGAAAAAATATCGGCCTCGAAGGCGACACGTCCACGCATGATTCATACGGAAAAAATGTCTTCCACTTACAATGAATTTGGCCGAAAGCGTTCGAAAACCGTTATAACCCATAAAGAACAAAACGGTTTGGATTTATTGCGTCATACCGGGCGTTCGATTGTCGACGACTATGAAATTCTTTCACCTGCCACTGAATTGCCCAAACAGATTAGTTCAAGTCCCCCACGAATCAAAGAAGAGATTGGGGAAAATAATCACGATGAATCATCACACCAACAACATAGTTTGCAATACGATGTACATGTCTCAAATTCCTCAAGAAACGTAGACCTTTATGACGCACAGTTCCTCGATGGCGCTTCATCGCTGCGCAAAGAAGCCTATGAAAAATTCAACCCTAGTATAGTTAACGATCTCGAAGAGATTTTGCGTTCTCCTATGAAATGTGATCGTGCTGAGCGCCATCGCTTTATAAGCGAGTCTTCCACGCCATTTCTCGAAGATGAGCAACATAATATGATCAAAATCGAACCAACATCACCGGATTTACGTGAAATCGTTGTTGGTGTCAGTGGCTCTGTCGGTGTGAGTGCAAGTggtggcagcggcagcagcaatgAACGTCGTTACGCACGCAGTGCACGCAATCGTATTGGCactataaatagaaaatatttggaatttgaATCGGATCTGCATACCAACGGTTCAGCACGTCATCAAAAGCGTAGTGCCACATCTGTCAATGGCAGCAGTCATTCAAAAAGTAAGCAAGCTAAGAACAGTCGACGCGAGAAAAAAGAAAGTTCCCTAATCAACCAAAGAACCACTACATATTCTTCCACTTACGGTGGTTCGCTGAGCACCACCAACGATTCATCTTTCTCTTCACTCTCGCCAACGGACGGCGTAACTGCGGTGTCAGCCGTACCGACAACCTCGCCGGCAACACCAACACAACCGGAACGCAAAGTGCGCTACTTCGAGTGTGAGATGTGCTCGGCTGTATTTCCAGATCGGGCACAGCTGCTGGATCACGtgcctatacatatataa
Protein Sequence: MDRQTFEIQWIQDDQDDLKTSNGQLLVKPQISSEDELLANDAAGAGRGTYHLVSGHDEDDNVPNEVDIDQIAAENLIFMARDGQMVTEIIDATAADNGTVVVATSDEIDCSEVLQHAGNGFMDSFVDTTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQVLLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHADAPDPELETEYMNFVEQEQQQLQMRQPNDHYYEQDWTTHINSLQRGEKSSRKPHNVSGNSSSTSTSTTIGRGRISRIKPKEESYGLNEPHENDTVGLANLENQSSAFEDCQQLQASTAVVKFTQNQSPAHQKSFPVIDESKPFVCQQCGLAFAREKAMLAHTKNHSEDHPHECSQCNEMFWDAAGLQEHLKTHQFEDSNSEYDPDEAEAEETQSESESERLYGEFYCSECGMSFHREDLLRRHAKIHTKTTAECGIDNDKDRHCCNTCGETFAEALDLLAHAEIHARYPPYKCVLCGETFFEELTIKRHLQSLHPHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCQEEFPDGRTLSNHRHSHTNASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCSRAFNQRVVLREHIRSHHSGLDAKRNTYYCSVCSMEMSSSGDLVQHLIQHSDMNTAMQRQPITGPRKYKRRRKLKPHEIARLRRESQQNGNGSDIEISDFDMDNVDDLLGIADPMPVSKSSKAKRSKVKDSINNNSLMKEGVDGVILPDNDMLVEQSRKPRYKYSGSNSDTLWQTKLINSNSLLSNLENTLQSIDTLVVGSTASGATHLDAEERKPRFKSDNDINTGGSQRTQEVQISKNYNANKARKRTEKISASKATRPRMIHTEKMSSTYNEFGRKRSKTVITHKEQNGLDLLRHTGRSIVDDYEILSPATELPKQISSSPPRIKEEIGENNHDESSHQQHSLQYDVHVSNSSRNVDLYDAQFLDGASSLRKEAYEKFNPSIVNDLEEILRSPMKCDRAERHRFISESSTPFLEDEQHNMIKIEPTSPDLREIVVGVSGSVGVSASGGSGSSNERRYARSARNRIGTINRKYLEFESDLHTNGSARHQKRSATSVNGSSHSKSKQAKNSRREKKESSLINQRTTTYSSTYGGSLSTTNDSSFSSLSPTDGVTAVSAVPTTSPATPTQPERKVRYFECEMCSAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563950; iTF_00192234; iTF_00193740; iTF_00190818; iTF_00190123; iTF_00192967; iTF_00191510;
90% Identity: iTF_00191510;
80% Identity: -