Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:651259-657673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00025 0.014 15.4 1.0 1 23 185 207 185 207 0.95

2 15 0.0012 0.065 13.2 2.3 3 23 215 235 213 235 0.95

3 15 0.001 0.057 13.4 0.1 1 23 379 401 379 401 0.97

4 15 0.00076 0.043 13.8 0.5 1 23 407 429 407 429 0.98

5 15 0.00013 0.0071 16.2 2.6 1 23 461 483 461 483 0.96

6 15 0.0074 0.41 10.7 0.3 1 23 497 519 497 519 0.94

7 15 0.018 1 9.5 0.2 1 23 525 548 525 548 0.96

8 15 0.24 13 6.0 0.3 5 19 559 573 556 574 0.91

9 15 0.00014 0.0078 16.1 5.6 1 23 583 605 583 605 0.97

10 15 0.06 3.3 7.8 0.4 3 23 612 632 610 632 0.96

11 15 8.2e-06 0.00045 20.0 1.0 1 23 640 662 640 662 0.98

12 15 0.0041 0.23 11.5 0.2 3 23 670 690 668 690 0.97

13 15 0.00013 0.0072 16.2 0.8 1 23 696 718 696 719 0.95

14 15 0.073 4.1 7.6 0.1 1 23 729 751 729 751 0.97

15 15 0.014 0.78 9.8 0.0 1 20 1278 1297 1278 1300 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00025	0.014	15.4	1.0	1	23	185	207	185	207	0.95
2	15	0.0012	0.065	13.2	2.3	3	23	215	235	213	235	0.95
3	15	0.001	0.057	13.4	0.1	1	23	379	401	379	401	0.97
4	15	0.00076	0.043	13.8	0.5	1	23	407	429	407	429	0.98
5	15	0.00013	0.0071	16.2	2.6	1	23	461	483	461	483	0.96
6	15	0.0074	0.41	10.7	0.3	1	23	497	519	497	519	0.94
7	15	0.018	1	9.5	0.2	1	23	525	548	525	548	0.96
8	15	0.24	13	6.0	0.3	5	19	559	573	556	574	0.91
9	15	0.00014	0.0078	16.1	5.6	1	23	583	605	583	605	0.97
10	15	0.06	3.3	7.8	0.4	3	23	612	632	610	632	0.96
11	15	8.2e-06	0.00045	20.0	1.0	1	23	640	662	640	662	0.98
12	15	0.0041	0.23	11.5	0.2	3	23	670	690	668	690	0.97
13	15	0.00013	0.0072	16.2	0.8	1	23	696	718	696	719	0.95
14	15	0.073	4.1	7.6	0.1	1	23	729	751	729	751	0.97
15	15	0.014	0.78	9.8	0.0	1	20	1278	1297	1278	1300	0.93

Sequence Information

Coding Sequence: ATGGACAGGCAAACCTTTGAAATACAATGGATTCAGGACCAGGATGATCTTAAAGCAGCCAGTGAGCAACTGATTGTTAAGCCACAAATGCCGTCTGAAGATGAGCTTCTCTCCAACGACGCGACTGGAGCGGGCCGAGGATCTTACCACTTAGTCACCGGTAATGATGAAGATGGCGATGTAACAAATGAAGTTGACATTGATCAAATAGCTGCTGAGAACTTAATATTCATGGCGCGCGATGGTCAAATGGTAACGGAGATAATTGATGCCAGTGCAGCTGATAACGGTAAAGTTGTCGTCGCCACTTCAGATGAGATTGACTGTTCGCAAGTATTGCAACAAACTGGAAATGGATTCATTGATGGTTTTGTCGATACAACACCTCAAATGGTAACAGAAGAAGTGATAACGGACGACTGGGTACAGCACCAAGGCGAAGAGCGtgTGGAAATACCAGCCGATCAAATAATTTGTTCTGGTTCGCAAGTTTTGCTGGACATGGAGGTGCCGTTACCAACAGTTCAGGATGAATATACCGCTCTTCGTCCATACCCGTGTGATTTTTGCAGTCGCCGTTTCCGTAAAAAGACAAGTTTGATGAATCATATAGTTGCACATCAGAACGATCGACcacatttatgtaaattatgcgGGTCCCGATTTTTCCGTCGTTCTGATTTAATAAATCATCTTAAAGCACATGCTGATGCTCCAGATCCTGAATTGGATACAGAATttatGAACTTTGTcgaacaagaacaacagcagtTGCAATTGCGGCAACCCAACGATCACTTTTATGAGCAAGATTGGACCACACACATAAATTCCTTGCAACGTACCGAAAAATCTAGTCGGAAACCGCATAATGTAAGCGGAAACAGTTCATCTACCTCAACATCCACGACAACGGGTCGTGGCCGTATTAGTCGACTTAAACCAAAGGAAGAAAGTTATGTTTTGAATGAGCCACATGAAAACGAAACAGTTGGGTTGGCGAATTTGGAGAATAGGTCTAGTGCTTTTGAAGACTGCCAACAACTACAGGCCTCCACTGCTGttgtgaaattttcacagaatcAATCACCAACTCATCAAAAGAGCTTCCCCGTTATCGACGAAAGTAAACCATTTGTTTGCCAACAGTGCGGATTGGCATTCGCACGTGAGAAGGCAATGTTGGCTCATACCAAGAATCATAATGAAGATCATCCGCATGAGTGTAACCAATGTAATGAGATGTTCTGGGACGCAGGTAGTCTGCAAGAACATCTGAAAACTCATCAATTTGAAGATAGTAATTCGGAGTACGACCCCGACGAGGCTGAGGCTGAAGAAACGCAAAGTGAATCCGAATCGGAGCGCTTATATGGGGAATTCTACTGTAGCGAATGCGGTATGTCATTTCATAGAGAAGATTTGCTGCGCAGACACTCCAAACTACATATAAAAACTATCGCTGAATGTGATATCGACAAGGATCGGCATTGCTGCAACACATGTGGCGAAACATTTGCCGAGGCGTTAGATCTACTTGCGCACGCTGAAATACATGCGCGTTATCCACCATATAAGTGTGTTCTTTGTGGTGAAACATTTTTCGAGGAGTTAGCGATTAAACGTCATCTGCAGTCAGTGCATCCACACGACATGACACCTAATTCATGTATACTCTGTGGCAAGGAATGCCGCGATCGTAAAGCTTTAATAAAGCATGCATGGGATCATTCTCGCGAAAAATGTCATTCGTGCTCAAAATGCGGCAAGAACTTTCACAATAAAGCACGTCTGAAGCGGCATATGGCGTCTCATCGTGATAAGTCTGTAATCTGCGATGTCTGTCAGGAAGAATTCCCTGATGGTCGCACTCTCTCCAACCACCGACACTCGCATACTAATGCCTCAGGTAAATTATTTCCCTGCCATGAATGCGGCAAAACTTTCGGTTCGCGCAGTTCTCAACAAATACATGTTCGCATTCATACCGGTGAGAGACCTTATGGTTGCCGCTTTTGTTGGAAGGCGTTCGCTGATGGTGGTACCTTGCGTAAACACGAACGTATTCACACAGGCGAAAAACCGTACGCTTGCTCGGTGTGCTCACGTGCTTTCAACCAGCGCGTAGTCTTGCGCGAACATATACGATCTCACCACTCGGGATTGGACGCAAAACGAAATACTTACTACTGCACCGTGTGCTCGATGGAAATGTCGTCATCTGGAGATCTCGTGCAACATTTAATACAACACAGTGATATGAACACTGCCATGCAGAGACAACCAATTACGGGTCCACGTAAGTACAAAAGGCGGCGAAAGTTGAAACCTCATGAAATCGCACGCCTGCGGAGGGAAAGCCAACAAAATGGCAATGGAAGTGATATCGAATTGTCAGACTTCGATATGGATAATGTAGATGACCTATTGGGCATCACGGAACCTATTCCGGTCTCCAAAGCGTCAAAATCCAAACGTAATAAAGTTAAAGACAGCATCAATAATAATTCTTTGATGAAAGAAGGAGTAGATGGTGTTATACTACCAGATAATGATCTACTTATGCAGTCTAGGAAGCCGCGGTATAAATCGACGGGTAGTAACTCCGATACCTTATGGCAAACAAAGCTCATCAATTCCAACACATTACTATCGAATTTAGAAAATACTCTGCAAAGCATTGACACACTTGTTGTGGGTTCGTCGGTTGGCGGTGCTACACATTTAGACCCGGAAGAACGCAAACCGAAGTATAAATCCGGCAGTGAGATTAGTTCTGGCGGCGGTTCACAACGCACTCAGGAAGTGCAGATAAACAAGAATTATAATGCGAATAAAACGCGTAAACGGACCGAAAAAGCATCGACGTCCAAGGCAACGCGTCCACGCATGATTCATACAGAAAAATTGTCTTCCACCTATAATGAATATGGACGAAAACGTTCTAAGACCGTCATCACGCATAGAGAACAAAACGGCTTAGATTTATTGCGTCCTACCGGTCGATCGATGGTCGATGACTATGAAATTCTCTCACCTGCCACTGAATTGCCACGTCAGATTAGTTCAAGCCCACCACGAATTAAACAGGAGATAGGGCAAAATAATCACGAAGAATCGTCACACCAGCTACGTGGTTTGCAATATGACGCACATGTCGCAAATTCTTCAAGGAACGTCGATCTTTATGACACACAATTCCTCGATGCAGCTTCGACGCTACGCAAGGAAGCCTATGAAAAATTCAACCCGAGTATAGTTAACGATCTCGAAGAGATTTTGCGTTCTCCCATCAAATGTGATCGTGCAGAACGCCATCGCTTTATAAGCGAGTCTTCCACGCCATTTCTCGAAGACGAGCAGCATAATATGATAAAAATTGAACCAACATCCCCAGATTTGCATGAGATCGTTGTTGGTGTCAGCGGGTCGGCTGGTGTGAGCGCGAGTggtggcagcggcagcagcaatgAACGTCACTACGCACGCAGTGCACGCAATCGGACCGGCACTATGAATCGAAAATATCTGGAATTTGAATCGGATCTCCAAACCAATGGTTCCACACGTCACCAAAAGCGTAGTTCTACAAATATCAACGGCAGCAGTTCGAAAAGTAAGCAAAGTAAGAGCAACAGGCGTGAGAAAAAAGAAAGTTCCGTAATCAACCAAAGAACGACCGCATATTCTTCAACTTACGGTGGCTCATTAACCACCACCAACGACTCATCCTTCTCTTCACTCTCGCCAACGGACGGCGTAACCGCGGCGTCAGCTGTAACAGCCACTTCGTCGCCAGCACCAACGCAACCGGAACGCAAAGTGCGCTACTTCGAGTGTGAGATGTGCTCGGCCGTATTTCCAGATCGAGCCCAGCTGCTGGATCACGtgcctatacatatataa
Protein Sequence: MDRQTFEIQWIQDQDDLKAASEQLIVKPQMPSEDELLSNDATGAGRGSYHLVTGNDEDGDVTNEVDIDQIAAENLIFMARDGQMVTEIIDASAADNGKVVVATSDEIDCSQVLQQTGNGFIDGFVDTTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQVLLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHADAPDPELDTEFMNFVEQEQQQLQLRQPNDHFYEQDWTTHINSLQRTEKSSRKPHNVSGNSSSTSTSTTTGRGRISRLKPKEESYVLNEPHENETVGLANLENRSSAFEDCQQLQASTAVVKFSQNQSPTHQKSFPVIDESKPFVCQQCGLAFAREKAMLAHTKNHNEDHPHECNQCNEMFWDAGSLQEHLKTHQFEDSNSEYDPDEAEAEETQSESESERLYGEFYCSECGMSFHREDLLRRHSKLHIKTIAECDIDKDRHCCNTCGETFAEALDLLAHAEIHARYPPYKCVLCGETFFEELAIKRHLQSVHPHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCQEEFPDGRTLSNHRHSHTNASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCSRAFNQRVVLREHIRSHHSGLDAKRNTYYCTVCSMEMSSSGDLVQHLIQHSDMNTAMQRQPITGPRKYKRRRKLKPHEIARLRRESQQNGNGSDIELSDFDMDNVDDLLGITEPIPVSKASKSKRNKVKDSINNNSLMKEGVDGVILPDNDLLMQSRKPRYKSTGSNSDTLWQTKLINSNTLLSNLENTLQSIDTLVVGSSVGGATHLDPEERKPKYKSGSEISSGGGSQRTQEVQINKNYNANKTRKRTEKASTSKATRPRMIHTEKLSSTYNEYGRKRSKTVITHREQNGLDLLRPTGRSMVDDYEILSPATELPRQISSSPPRIKQEIGQNNHEESSHQLRGLQYDAHVANSSRNVDLYDTQFLDAASTLRKEAYEKFNPSIVNDLEEILRSPIKCDRAERHRFISESSTPFLEDEQHNMIKIEPTSPDLHEIVVGVSGSAGVSASGGSGSSNERHYARSARNRTGTMNRKYLEFESDLQTNGSTRHQKRSSTNINGSSSKSKQSKSNRREKKESSVINQRTTAYSSTYGGSLTTTNDSSFSSLSPTDGVTAASAVTATSSPAPTQPERKVRYFECEMCSAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563089;
90% Identity: iTF_00193740; iTF_00190818; iTF_00192967; iTF_00192234; iTF_00190123; iTF_01563089; iTF_01563950;
80% Identity: -