Basic Information

Insect: Bactrocera correcta
Gene Symbol: -
Assembly: GCA_027475135.1
Location: CM050325.1:162012078-162016779[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00028 0.033 15.4 1.0 1 23 185 207 185 207 0.95

2 15 0.0013 0.15 13.2 2.3 3 23 215 235 213 235 0.95

3 15 0.0012 0.14 13.4 0.1 1 23 379 401 379 401 0.97

4 15 0.00089 0.1 13.8 0.5 1 23 407 429 407 429 0.98

5 15 6.6e-05 0.0076 17.4 2.3 1 23 461 483 461 483 0.97

6 15 0.0086 0.98 10.7 0.3 1 23 499 521 499 521 0.94

7 15 0.022 2.5 9.4 0.2 1 23 527 550 527 550 0.96

8 15 0.28 32 6.0 0.3 5 19 561 575 558 576 0.91

9 15 0.00016 0.019 16.1 5.6 1 23 585 607 585 607 0.97

10 15 0.069 8 7.9 0.4 3 23 614 634 612 634 0.96

11 15 9.4e-06 0.0011 20.0 1.0 1 23 642 664 642 664 0.98

12 15 0.0048 0.55 11.5 0.2 3 23 672 692 670 692 0.97

13 15 0.00015 0.017 16.2 0.8 1 23 698 720 698 721 0.95

14 15 0.085 9.8 7.6 0.1 1 23 731 753 731 753 0.97

15 15 0.016 1.9 9.8 0.0 1 20 1276 1295 1276 1298 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00028	0.033	15.4	1.0	1	23	185	207	185	207	0.95
2	15	0.0013	0.15	13.2	2.3	3	23	215	235	213	235	0.95
3	15	0.0012	0.14	13.4	0.1	1	23	379	401	379	401	0.97
4	15	0.00089	0.1	13.8	0.5	1	23	407	429	407	429	0.98
5	15	6.6e-05	0.0076	17.4	2.3	1	23	461	483	461	483	0.97
6	15	0.0086	0.98	10.7	0.3	1	23	499	521	499	521	0.94
7	15	0.022	2.5	9.4	0.2	1	23	527	550	527	550	0.96
8	15	0.28	32	6.0	0.3	5	19	561	575	558	576	0.91
9	15	0.00016	0.019	16.1	5.6	1	23	585	607	585	607	0.97
10	15	0.069	8	7.9	0.4	3	23	614	634	612	634	0.96
11	15	9.4e-06	0.0011	20.0	1.0	1	23	642	664	642	664	0.98
12	15	0.0048	0.55	11.5	0.2	3	23	672	692	670	692	0.97
13	15	0.00015	0.017	16.2	0.8	1	23	698	720	698	721	0.95
14	15	0.085	9.8	7.6	0.1	1	23	731	753	731	753	0.97
15	15	0.016	1.9	9.8	0.0	1	20	1276	1295	1276	1298	0.93

Sequence Information

Coding Sequence: ATGGACAGGCAAACCTTTGAAATACAATGGATTCAGGACCAGGATGATCTTAAAACAGCCAATGGGCAACTGATTGTAAAGCCACAAATGCCGTCTGAAGATGAGCTTCTTGCCAACAATGCAACTGGAGCGGGCCGTGGATCCTACCACTTAGTCACTGGTAATGATGAAGATGGCGATGTAACAAATGAAGTCGACATTGATCAAATAGCTGCTGAGAACTTAATATTCATGGCGCGCGATGGTCAAATGGTAACGGAGATAATTGATGCCAGTGCAGCTGATAACGGTAAAGTTGTCGTCGCCACTTCAGATGAGATTGACTGTTCGGAAGTATTGCAGCAAACTGGAAATGGATTCATTGATAGTTTTGTAGATACAACACCTCAAATGGTAACAGAAGAAGTGATAACGGACGACTGGGTACAGCACCAAGGCGAAGAGCGTGTAGAAATACCAGCCGATCAAATCATTTGTTCTGGTTCGCAAGTTTTGCTGGACATGGAAGTGCCGTTACCAACAGTTCAGGATGAGTATACCGCTCTACGTCCATATCCGTGTGATTTTTGCAGTCGGCGATTCCGTAAAAAGACAAGTTTGATGAATCATATAGTTGCACATCAGAACGATCGGCCACATTTATGTAAATTATGCGGCTCCCGATTTTTCCGTCGTTCTGATCTAATAAATCACCTTAAAGCACATGCTGATGCTCCAGATCCTGAATTGGACACAGAATTTATGAACTTTGTCGAACAAGAACAACAGCAGTTGCAATTGCGGCAACCCAACGATCACTTTTATGAGCAAGACTGGGCCACACACGTAAATTCCTTGCAACGTAGCGAAAAATCTAGTCGGAAACCGCATAATGTAAGCGGAAACAGTTCATCTACCTCAACATCCACGACAACGGGTCGTGGCCGTATTAGTCGAATTAAACCAAAGGAAGAAAGTTATGTTTTGAATGAGCCACATGAAAACGAAACAGTTGGGTTGGCGAATTTGGAGAATCCGTCTAGTGCTTTTGAAGACTGCCAACAACTACAGGCCTCCACTGCAGTTGTGAAATTTACCCATAATCAATCACCAGCCCATCAAAAGAGCTTCCCCGTTATCGATGAAAGTAAACCATTTGTTTGCCAACAGTGCGGATTGGCATTCGCACGTGAGAAAGCAATGTTGGCCCATACCAAGAATCATAATGAAGATCATCCGCATGAGTGTAACCAATGTAATGAGATGTTCTGGGATGCAGGCAGTCTGCAAGAACATCTGAAAACTCATCAATTTGAAGATAGTAACTCGGAGTACGACCCCGACGAAGCTGAGGCTGAAGAAACACAAAGTGAATCCGAATCGGAGCGCTTATATGGGGAATTCTACTGTAGCGAATGCGGAATGTCATTTCATAGAGAAGATTTGCTGCGCAGACACTCCAAAATACATATAAAAACTATTGCTGAATGTGATATCGATAATGATAAGGATCGGCATTGTTGCAACACATGTGGTGAAACATTTGCTGAGGCGTTAGATTTACTTGCGCATGCTGAAATACATGCGCGTTATCCACCATATAAGTGTGTTCTTTGTGGAGAGACTTTTTTCGAGGAGTTAGCTATTAAACGTCATCTGCAGTCATTGCATCCACACGACATGACGCCCAATTCATGTATACTCTGTGGCAAGGAATGCCGCGATCGTAAAGCTCTAATAAAGCATGCGTGGGATCATTCACGCGAAAAATGTCATTCGTGCTCAAAATGCGGCAAAAACTTCCACAATAAAGCTCGTCTGAAACGGCATATGGCGTCTCATCGTGATAAGTCAGTAATCTGCGATGTCTGTCAGGAAGAATTCCCTGATGGTCGCACTCTCTCCAACCACCGGCACTCGCATACTAATGCCTCAGGTAAACTATTTCCCTGCCATGAATGCGGCAAAACTTTCGGTTCGCGCAGTTCACAACAAATACATGTTCGCATCCATACCGGTGAGAGACCTTATGGTTGCCGCTTTTGTTGGAAGGCGTTCGCTGATGGCGGTACATTGCGTAAACACGAACGTATTCACACGGGCGAAAAACCGTACGCTTGCTCGGTGTGCTCGCGTGCTTTCAACCAGCGCGTGGTCTTGCGCGAACATATACGATCTCACCACTCGGGATTGGACGCAAAACGTAATACTTACTACTGCACCGTGTGCTCGATGGAAATGTCGTCGTCTGGAGATCTCGTGCAACATTTAATACAACACAGTGATATGAACACTGCCATGCAGAGGCAACCAATTACGGGTCCACGTAAGTACAAAAGGCGGCGTAAGTTGAAACCTCATGAAATCGCACGCTTGCGGAGGGAAAGCCAACAAAATGGCAATGGAAGTGATAACGAATTGTCAGATTTCGATATGGATAATGTAGATGACCTATTGGGTATCGCGGAACCTTTTCCGGTCTCCAAAACGTCAAAATCCAAACGTAATAAAGTTAAAGACAGCATCAATAATAATTCTTTGATGAAGGAAGGAGTAGATGGTGTTATACTACCTGATAATGATCTACTTATGCAGTCTAGGAAGCCGCGGTATAAATCGACGGGTAGTAACTCCGATACCTTATGGCAAACAAAGCTCATCAATTCCAACACATTACTATCGAATTTAGAAAATACTCTGCAAAGCATTGACACACTTGTAGTGGGTTCGTCGGTTGGCGGTGCTACACATTTAGACGCGGAAGAACGCAAACTGAAGTATAAATCGGGAAGTGAGATTAGTTCTGGCGGTGGTTCACAACGCACTCAGGAAGTGCAGATCAACAAGAATTATAATGCGAATAAAGCGCGTAAACGGACCGTCGAAAAAGCATCGACGTCCAAGGCAACGCGTCCACGCATGATACATACAGAAAAATTGTCTTCCACCTATAATGAATATGGACGAAAACGTTCTAAGACCGTCATAACGCATAGAGAACAAAACGGCTTAGATTTATTGCGTCCTACCGGTCGATCGATGGTCGATGACTATGAAATTCTCTCACCTGCCACTGAACTGCCACGTCAGATTAGTTCAAGCCCACCACGAATTAAACAGGAGATAGGGCAAAATAATCACGAAGAATCGTCACACCAATACGACGCACATGTCACAAATTCTTCAAGGAACGTCGATCTTTATGACACACAATTCCTCGATGCAGCTTCGACACTACGCAAGGAAGCCTATGAAAAATTCAACCCGAGTATAGTTAACGATCTCGAAGAGATTTTGCGTTCTCCCATCAAATGTGATCGTGCAGAACGCCATCGCTTTATAAGCGAGTCATCCACGCCGTTTCTCGAAGACGAGCAGCATAATATGATAAAAATCGAACCAACATCCCCAGATTTGCGTGAGATCGTTGTTGGTGTCAGCGGGTCGGCTGGTGTGAGTGCAAGTGGTGGCAGCGGCAGCAGCAATGAACGTCATTACGCACGCAGTGCACGCAATCGCACCGGCACTATGAATCGAAAATATCTGGAATTTGATTCGGATCTGCAAACCAATGGTTCCACACGTCACCAAAAGCGTAGTGCTACAACTGTCAACGGCAACAGTTCGAAAAGTAAGCAAACTAAGAGCAGCAGGCGTGAGAAAAAAGAAAGTTCCGTAATCAACCAAAGAACGACCGCATATTCTTCAACTTACGGTGGCTCCTTGACCACCACCAACGACTCATCATTCTCTTCACTCTCGCCAACGGACGGCGTAACCGCGGTATCAGCTGTAACAGCCACGTCACCGCCAGCACCAACGCAACCAGAACGCAAAGTGCGCTATTTCGAGTGTGAGATGTGCTCGGCCGTATTTCCAGATCGAGCCCAGCTCCTGGATCACGTGCCTATACATATATAA
Protein Sequence: MDRQTFEIQWIQDQDDLKTANGQLIVKPQMPSEDELLANNATGAGRGSYHLVTGNDEDGDVTNEVDIDQIAAENLIFMARDGQMVTEIIDASAADNGKVVVATSDEIDCSEVLQQTGNGFIDSFVDTTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQVLLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHADAPDPELDTEFMNFVEQEQQQLQLRQPNDHFYEQDWATHVNSLQRSEKSSRKPHNVSGNSSSTSTSTTTGRGRISRIKPKEESYVLNEPHENETVGLANLENPSSAFEDCQQLQASTAVVKFTHNQSPAHQKSFPVIDESKPFVCQQCGLAFAREKAMLAHTKNHNEDHPHECNQCNEMFWDAGSLQEHLKTHQFEDSNSEYDPDEAEAEETQSESESERLYGEFYCSECGMSFHREDLLRRHSKIHIKTIAECDIDNDKDRHCCNTCGETFAEALDLLAHAEIHARYPPYKCVLCGETFFEELAIKRHLQSLHPHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCQEEFPDGRTLSNHRHSHTNASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCSRAFNQRVVLREHIRSHHSGLDAKRNTYYCTVCSMEMSSSGDLVQHLIQHSDMNTAMQRQPITGPRKYKRRRKLKPHEIARLRRESQQNGNGSDNELSDFDMDNVDDLLGIAEPFPVSKTSKSKRNKVKDSINNNSLMKEGVDGVILPDNDLLMQSRKPRYKSTGSNSDTLWQTKLINSNTLLSNLENTLQSIDTLVVGSSVGGATHLDAEERKLKYKSGSEISSGGGSQRTQEVQINKNYNANKARKRTVEKASTSKATRPRMIHTEKLSSTYNEYGRKRSKTVITHREQNGLDLLRPTGRSMVDDYEILSPATELPRQISSSPPRIKQEIGQNNHEESSHQYDAHVTNSSRNVDLYDTQFLDAASTLRKEAYEKFNPSIVNDLEEILRSPIKCDRAERHRFISESSTPFLEDEQHNMIKIEPTSPDLREIVVGVSGSAGVSASGGSGSSNERHYARSARNRTGTMNRKYLEFDSDLQTNGSTRHQKRSATTVNGNSSKSKQTKSSRREKKESSVINQRTTAYSSTYGGSLTTTNDSSFSSLSPTDGVTAVSAVTATSPPAPTQPERKVRYFECEMCSAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563089;
90% Identity: iTF_00191510;
80% Identity: -