Zgab007008.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus gabonicus
Gene Symbol
nfxl1
Assembly
GCA_018903695.1
Location
JAEIFO010001557.1:2146603-2149947[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.6e+04 -8.2 6.4 15 19 209 213 208 213 0.82
2 20 0.14 1.1e+03 -0.4 0.4 4 10 244 250 243 250 0.95
3 20 7e-08 0.00057 19.7 15.5 1 18 258 274 258 275 0.98
4 20 2 1.6e+04 -4.2 2.6 6 10 301 305 300 305 0.89
5 20 1e-07 0.00084 19.2 17.0 1 19 311 330 311 330 0.98
6 20 1.2 9.6e+03 -3.4 0.6 5 10 354 359 354 359 0.92
7 20 4.3e-06 0.035 14.0 12.4 1 19 365 385 365 393 0.87
8 20 1.8 1.4e+04 -3.9 0.8 6 10 409 413 408 415 0.54
9 20 1.2e-07 0.00098 18.9 11.7 1 18 419 436 419 437 0.97
10 20 0.97 7.8e+03 -3.1 2.0 1 5 446 450 446 455 0.78
11 20 0.79 6.4e+03 -2.8 1.8 5 10 460 465 460 465 0.95
12 20 0.00039 3.1 7.8 17.2 1 18 471 488 471 489 0.97
13 20 3.6e-08 0.00029 20.6 14.7 1 19 498 516 492 516 0.90
14 20 0.39 3.2e+03 -1.9 1.1 6 10 544 548 543 548 0.92
15 20 5.8e-05 0.47 10.4 7.2 9 18 561 570 559 571 0.90
16 20 0.1 8.3e+02 0.0 5.0 1 11 583 592 583 593 0.88
17 20 4.5e-06 0.036 13.9 6.0 1 11 659 669 659 670 0.96
18 20 0.074 6e+02 0.5 15.7 4 18 700 714 698 715 0.94
19 20 1.8 1.5e+04 -4.0 1.6 8 13 720 725 719 725 0.74
20 20 5.9e-07 0.0048 16.8 10.2 1 16 766 780 766 786 0.92

Sequence Information

Coding Sequence
ATGCGGCTATCAGGAACTCTCGATAGCGTTTTTTTGAACATCGATAATATCGCAGAAGTGCAGCTGATAATCGTTACGCCAACTTTCACAGCGCATCCCTGTCTGATATCCCTGGCATGCGAAATTTGTAAATTCAACGCAAGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAGTTAGTAGATGCCTACGCATCCAGTTCAGAGGATGAGGGTGAACTAGATGAGAAACACATTCTTGATCTGCTATACAAGCACTATCAGAGCACAGATTATGGTTCAGTCTCTGATGGCTCCAAGCGCAATGATAACGTGAATCGCACGGCGACATTCCTGGAAAATACTCTACATTCGGGAGCAGCAACTTGCCTCATATGCATTGGCAGCATACGCCGTGTGGAGTCGATATGGTCATGCAAGTCCTGCTACTGCTTCTTCCATCTAAATTGCATACAACGCTGGGCCAACGACAGCGTAATGCAGATGAAGGTAAAGGCGGAGCAGCAACAGAACGGAGGCAATCAGGGACATTATAATCATCTGGGCGAATTTGTGCCACCCAAGCGTCAGAAGACACCACACTGGTGTTGCCCACAGTGTCGCAAAGATTACCAGCCGGCAGATAAGCCTACTTCGTATGAATGCTTCTGCGGCAAGGAGTGCAATCCACAACCCCAACCCTTTCTAGTTCCGCATTCTTGTGGTGAAATCTGTGGCAAGTTGCTGCAACCCAAGTGCGGCCATGACTGCAAGCTACTCTGTCATCCCGGACCGTGTCCACCATGCGCACAGCTGATGCAAACCTCTTGTCTGTGTGGCAAGTCGCCGCCTCGTTCCAAGCGTTGCCTAGATAAGAACTGGCAGTGCGAGCAGAAGTGTAATTCTCTCCTGTCCTGTGGCAAGCACAAGTGCAACCAGCGCTGCCATCGTCCTGGGCAGTGTCCGCCCTGTAGCAGCAAGAGCCTCCAGTATTGTAATTGCAGACGTGAACAAAAGGTGGTCAACTGCTCGGACCTCAAGTGGAAGTGCAACAATATATGTGGCGCCAGTTTTGCCTGTGGTCTGCACAAGTGCGAGAAGGTCTGCCATGATTCAGACTGCGGTGGTGGCGACTGTCCGTTGGGCGTGCGCAGCTGTCCCTGTGGAAAGAGTGTCAAGTCTGGAAACTGCAGCGAGGTAGTGGAAACTTGTGGCGACACCTGCCAGAAACTGCTCTCCTGTGGCAAGCACAGCTGTGCGCAGCGCTGTCATCGTGGTGCATGCAACCAGTGCCTGCTGCGCACCACCAAGAAGTGTCGCTGTGGACACCACGAGAAAGAGATGCCTTGCTCCAAGGACTTTACATGTGAATCCAAATGCAAGCTGATGAGGGACTGTGGCAAACATGCCTGCAATAGAAAGTGCTGTGGCGATCAGTGTCCCCCCTGCGAAAAGATTTGCGGAAAGCAGCTAAGCTGCAACAAGCACAAGTGTCAGTCTGTCTGCCACAATGGCCCTTGTTATCCCTGCAAGCTGGAATCGCAGGTCAACTGCCGTTGTGGCAAAACGAGACGCAGTGTGCCCTGTGGACGTGAGAAGAATGCACGCATTGCCTGCCAGGAGCTGTGCCGCATTACAGCCAAGTGTCATCACGCCATCAAGCATCGTTGCCACAAGGGGGAGTGTCCCCCCTGTGCACAGCCATGTGGCCTACCCAATGATACCAGCAACTGCTCCCACATTTGCAAGGCACGCTGCCATGCAGCTGTTCGTGTAGTCAAGCCTGCTGGAGCTGCAATACGTCCTGGTGCCAATAAGTATGAATACCGCGCACTACCACATCCGCGATGCGAAGAGCCCGTGAGTGTCACCTGCATTGGTGGCCACGAGGTAGCCAATTGGCCCTGCTGGAACTCCAAACCCACATCCTGTGGGCGTCCTTGTGCACGCAAACTAAAGTGTGGCAATCATAGCTGCACGCGGGTCTGTCATGCTGTGCCTCAGTTGGATGACATGCAGCAACAGCCGGGATGTGTCAATTGCGAACTAGGATGCGCCGTGGCACGTCAGCCAGGCTGTGTGCACGCCTGTCCCAAAGGTTGTCATCCGCCTCCCTGTGCTCCTTGTGCTGCGGTGATCAAGAGCAAATGCCACTGTGGACTCAACCAGGTGCTCTACAAGTGCAGCGAGTTCTACCAAAACGAGGGCAGTGTCCAAGAGATTGTGGAGCTGCGCGAGAAGATGCGCAGCTGTGGCAATCGTTGCTTGAAGAATTTCCCGTGTGGCCATCGCTGCATGAGCATCTGTCACTCCGGCAAGTGTCCCAATCCAGAGTTGTGCCGCAAGAAAGTGCGCATCTTCTGCGTTTGCAAACGGATTAAGCTGGAGATCTCCTGCGACAAGCATCGTGCAGGACAAACCACATTGGATTGCGACTCCCAGTGTAGCATGGAACGTTCCAAGGCGGAGGCCATAGAGCAGCAACAGTTAGCAGAGAAGAAACGCCAGGAGGAAGAGCGCAATCGTATTGAGTTGGAGAAGTTTGAGAAGAAGTTTGGCAAGCGGAAGCATAAGGAGCGGAAGACAGTGGATGTCAAGGAGACCAAGAGGGAAATCAATTGGCAGCGCATGGGAATCTATGCGGTGTCTCTGCTTGCTGTGCTGGGTGCTCTAGCTGTAGCCTACTATGGAGATAATTAA
Protein Sequence
MRLSGTLDSVFLNIDNIAEVQLIIVTPTFTAHPCLISLACEICKFNASXXXXXXXXXXXXXXXXXXXXXXKLVDAYASSSEDEGELDEKHILDLLYKHYQSTDYGSVSDGSKRNDNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQNGGNQGHYNHLGEFVPPKRQKTPHWCCPQCRKDYQPADKPTSYECFCGKECNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLMQTSCLCGKSPPRSKRCLDKNWQCEQKCNSLLSCGKHKCNQRCHRPGQCPPCSSKSLQYCNCRREQKVVNCSDLKWKCNNICGASFACGLHKCEKVCHDSDCGGGDCPLGVRSCPCGKSVKSGNCSEVVETCGDTCQKLLSCGKHSCAQRCHRGACNQCLLRTTKKCRCGHHEKEMPCSKDFTCESKCKLMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIACQELCRITAKCHHAIKHRCHKGECPPCAQPCGLPNDTSNCSHICKARCHAAVRVVKPAGAAIRPGANKYEYRALPHPRCEEPVSVTCIGGHEVANWPCWNSKPTSCGRPCARKLKCGNHSCTRVCHAVPQLDDMQQQPGCVNCELGCAVARQPGCVHACPKGCHPPPCAPCAAVIKSKCHCGLNQVLYKCSEFYQNEGSVQEIVELREKMRSCGNRCLKNFPCGHRCMSICHSGKCPNPELCRKKVRIFCVCKRIKLEISCDKHRAGQTTLDCDSQCSMERSKAEAIEQQQLAEKKRQEEERNRIELEKFEKKFGKRKHKERKTVDVKETKREINWQRMGIYAVSLLAVLGALAVAYYGDN