Dara010048.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila arawakana
Gene Symbol
nfxl1
Assembly
GCA_018151165.1
Location
JAECWX010000142.1:5964637-5967716[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.6e+04 -8.1 6.4 15 19 152 156 151 156 0.82
2 19 0.13 1e+03 -0.3 0.4 4 10 187 193 186 193 0.95
3 19 6.5e-08 0.00052 19.8 15.5 1 18 201 217 201 218 0.98
4 19 1 8.3e+03 -3.2 2.7 6 10 244 248 243 248 0.89
5 19 1.2e-07 0.00095 19.0 16.2 1 19 254 273 254 273 0.97
6 19 0.4 3.2e+03 -1.9 1.4 5 10 297 302 297 302 0.94
7 19 6.2e-08 0.00049 19.9 15.2 1 19 308 328 308 335 0.95
8 19 0.027 2.2e+02 1.8 1.0 5 12 351 358 351 358 0.92
9 19 3.4e-08 0.00027 20.7 10.3 1 18 362 379 362 380 0.96
10 19 0.7 5.6e+03 -2.7 0.4 1 5 389 393 389 398 0.73
11 19 2 1.6e+04 -5.0 2.3 5 10 403 408 403 408 0.91
12 19 0.0045 36 4.4 19.2 1 18 414 431 414 432 0.97
13 19 3.4e-08 0.00027 20.7 14.7 1 19 441 459 435 459 0.90
14 19 0.00016 1.2 9.0 8.6 9 18 504 513 502 514 0.91
15 19 0.013 1e+02 2.9 5.9 1 11 526 535 526 536 0.95
16 19 1.3 1e+04 -3.5 1.0 6 10 592 596 591 596 0.83
17 19 5.6e-06 0.045 13.6 4.2 1 11 602 612 602 613 0.96
18 19 0.0036 29 4.6 12.2 4 18 643 657 641 658 0.94
19 19 3.1e-06 0.024 14.5 10.7 1 16 709 723 709 729 0.92

Sequence Information

Coding Sequence
ATGGAAAAATTTAACAAGGCGCAGGCAAAGAATTTGGCAGCTGCACAAAAACTGGTTGATGCATACGCTTCCAGTTCTGAAGATGAAGGCGAATTGGATGAAAAGCATATTCTTGATTTGTTATACAAGCATTACCAAAGTTCCTCGGACGGGTCGGCTGCCGGGAAACGCACTGAGAATAATGCAAATCGCACAGCAACGTTCCTGGAGAATACTTTGCATTCGGGAGCGGCAACCTGCTTGATCTGCATCGGAAGCATCCGTCGTGTGGAGTCGATATGGTCCTGCAAGAGTTGCTACTGCTTCTTCCATTTGAATTGCATACAGCGATGGGCCAACGATAGTGTGATGCAAATGAAAGTCAAGGCGGAGCAAAATGGCAATCAGCAGGGACACTACAATCATCTAGGAGAATTTGTGCCTCCAAAGCGACCAAAATCAATGCACTGGTGTTGTCCACAGTGTCGTAAAGATTATCAGCCATCAGATCGACCCACTCAATACGATTGCTTCTGTGGCAAAGAGCTGAATCCGCAGCCTCAGCCGTTCCTAGTGCCGCACTCCTGTGGTGAAATCTGTGGAAAATTGTTGCAACCAAAATGTGGTCACGATTGCAAGCTGCTCTGCCATCCTGGACCGTGTCCACCCTGCGCGCAACTGGCCAACAACTCGTGTCTGTGCGGCAAATCTGCGCCACGCTCCGTGCGCTGCATCGACAAGAACTGGCAGTGCCAGCAAACGTGTCAAGCGCTTTTGGCCTGTGGTAAGCACAAGTGCAACCAAAGATGTCATCGTACTGGACAATGTCCACCGTGCACCAACAAGAGTTCACAGCCCTGCGATTGCAAGCGAGAAACAAAGGTTGTCAACTGTTCCGAGCCCCGTTGGAAGTGCAGCCAAGTATGCGGTGCCCCCTTTGCTTGTGGACTACACACATGCGACAAGGTGTGTCATGATGGGCCCTGCGGAGGTGGAGAATGTCCTTTGGGCTTGCGCAGCTGTCCATGTGGCAAAACTAGCAAATCTGGCGTCTGCAGCGAAGTTGTTGAGACCTGTGGTGATACTTGCCACAAACTGCTGCCTTGTGGAAAGCATACGTGTGCGCAGCGTTGTCATCGAGGTGCTTGCAACCTGTGTCTGGTACGCACGAAGAAAAAGTGTCGTTGTGGCTTGCATGAGAAGGAGCTGCCCTGCTCCAAGGACTTCACCTGCGAAACTAAGTGCAAACTGATGCGTGATTGTGGCAAACATGGCTGCAATCGCAAGTGTTGTGGCGATCAGTGTCCGCCGTGTGAGAAGATTTGCGGCAAGCAGCTGAGCTGCAACAAACACAAGTGTCAATCCGTGTGCCACAATGGTCCATGTTATCCCTGCAAATTAGAGTCTCAGGTAAACTGTCGATGCGGCAAGACACGACGCAATGTGCCCTGTGGCAGGGAGAAGAGCGCACGCATTGCCTGTATGGAGCTATGCAGAATCTCAGCCAAGTGTCATCATGCCATCAAACATCGCTGTCACAAAGGCGAGTGCCCGCCGTGTGGTCAAGTCTGTGGATTGCCAAACGATACCAGCGGTTGTGGTCACCTCTGCAAGGCACGCTGTCATGCAGCCATTAGAACTAACAAGCCAACAGATGCTGCAGCACGGCAAAGAGCCAATAAATATGAGTACCGGGCACAACCACATCCACGCTGTGAGGAGCCTGTCAATGTCACCTGTATTGGTGGCCACGAGTTGGCCACTTGGCCCTGCTGGAACTCCAAGCCCTCATCCTGCCAGCGCAGCTGTGCACGGAAGTTGAAATGTGGCAACCATAACTGTGACTTAGTCTGTCATGCTGTGCCCAAGCCACAGGACATGTTGCAGCAGTTGGGCTGCGCCAATTGTGAGCGGGGCTGTGACATTCCACGTCCTCCAGGCTGTGTGCATGCCTGTGCCAAAGGCTGTCATCCAGCTCCGTGTGCGCCCTGTGCCTTTGTCATCAAAAGCAAATGTCACTGTGCTCTCAATCAGGTTGTGTACAAGTGCAGTGAGTTTTATATGGAAGTGGGAAATTCACAGGAGACTCTGGAGCATCGGGAGAAGCTGGGCAGCTGTGGCAATCGTTGCCTTAAGAATTTTGCCTGCGGTCACCGCTGTCTGACCATTTGCCACTCCGGCCAGTGTCCCAATCCAGAGCTGTGCCGAAAAAAGGTGCGCATTTACTGTGTTTGCAAGCGTATTAAGCTGGAGGTTTCTTGCGACAAACATAGAGGCGGTCAAATATCCTTGGATTGCGATGACAACTGTCAGGCTGAACGATCCAAGGCTGTGGCGACGGAGCAACAGCAATTGGAGCAGCGACTGCGTCAGGAAGAGGCCAAGAATCGTTTAGAGTTGGAGAAATTCGAACAGAAATTCGGCAAACGTAAGCCCAAAGAACGCAAAGCTGTTGATGTGGAGCCTACCAAAATGAATATTAATTGGAAGCGTCTGGCCATCTATATAGTATCGTTCCTAGCCGTGATGTTAGCCCTAGCCGTGGCTTACTATGCGGAGAGTTGA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQSSSDGSAAGKRTENNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQNGNQQGHYNHLGEFVPPKRPKSMHWCCPQCRKDYQPSDRPTQYDCFCGKELNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANNSCLCGKSAPRSVRCIDKNWQCQQTCQALLACGKHKCNQRCHRTGQCPPCTNKSSQPCDCKRETKVVNCSEPRWKCSQVCGAPFACGLHTCDKVCHDGPCGGGECPLGLRSCPCGKTSKSGVCSEVVETCGDTCHKLLPCGKHTCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKSARIACMELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNDTSGCGHLCKARCHAAIRTNKPTDAAARQRANKYEYRAQPHPRCEEPVNVTCIGGHELATWPCWNSKPSSCQRSCARKLKCGNHNCDLVCHAVPKPQDMLQQLGCANCERGCDIPRPPGCVHACAKGCHPAPCAPCAFVIKSKCHCALNQVVYKCSEFYMEVGNSQETLEHREKLGSCGNRCLKNFACGHRCLTICHSGQCPNPELCRKKVRIYCVCKRIKLEVSCDKHRGGQISLDCDDNCQAERSKAVATEQQQLEQRLRQEEAKNRLELEKFEQKFGKRKPKERKAVDVEPTKMNINWKRLAIYIVSFLAVMLALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01552851;
90% Identity
iTF_00471292;
80% Identity
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