Dpar016906.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- nfxl1
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000247.1:5046275-5049355[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2e+04 -8.1 6.4 15 19 152 156 151 156 0.82 2 19 0.13 1.3e+03 -0.3 0.4 4 10 187 193 186 193 0.95 3 19 6.5e-08 0.00065 19.8 15.5 1 18 201 217 201 218 0.98 4 19 1 1e+04 -3.2 2.7 6 10 244 248 243 248 0.89 5 19 1.2e-07 0.0012 19.0 16.2 1 19 254 273 254 273 0.97 6 19 0.4 4e+03 -1.9 1.4 5 10 297 302 297 302 0.94 7 19 9.7e-08 0.00097 19.3 15.0 1 19 308 328 308 335 0.95 8 19 0.027 2.7e+02 1.8 1.0 5 12 351 358 351 358 0.92 9 19 1.5e-08 0.00015 21.9 10.9 1 18 362 379 362 380 0.96 10 19 0.7 7e+03 -2.7 0.4 1 5 389 393 389 398 0.73 11 19 2 2e+04 -5.0 2.3 5 10 403 408 403 408 0.91 12 19 0.0045 45 4.4 19.2 1 18 414 431 414 432 0.97 13 19 3.4e-08 0.00034 20.7 14.7 1 19 441 459 435 459 0.90 14 19 0.00016 1.6 9.0 8.6 9 18 504 513 502 514 0.91 15 19 0.013 1.3e+02 2.9 5.9 1 11 526 535 526 536 0.95 16 19 1.3 1.3e+04 -3.5 1.0 6 10 592 596 591 596 0.83 17 19 4.2e-05 0.42 10.8 4.1 1 11 602 612 602 613 0.96 18 19 0.0036 36 4.6 12.2 4 18 643 657 641 658 0.94 19 19 9.7e-06 0.097 12.9 10.4 1 16 709 723 709 729 0.92
Sequence Information
- Coding Sequence
- atggaaaaatttaaCAAGGCGCAGGCTAAGAATTtggcagcagcacaaaaacTGGTTGATGCATACGCTTCTAGTTCTGAAGATGAAGGCGAATTGGATGAAAAGCATATTCTAGATTTGTTATACAAGCATTACCAAAGTTCCTCGGATGGGTCGGCTACCGGGAAACGCACTGAGAATAATGCAAATCGCACAGCAACGTTCCTGGAGAATACTCTGCACTCTGGAGCCGCAACGTGTTTGATATGCATTGGTAGCATCCGTCGTGTGGAGTCTATATGGTCCTGCAAGAGTTGCTACTGCTTCTTCCACTTGAACTGCATACAGCGATGGGCCAACGACAGTGTAATGCAAATGAAAGTCAAGGCGGAGCAAAATGGGAATCAGCAGGGACACTACAATCATCTCGGGGAGTTTGTGCCTCCCAAGCGGCCCAAATCAATGCATTGGTGCTGTCCACAGTGTCGCAAAGATTATCAGCCTTCAGATCGACCCACACAATATGATTGCTTCTGTGGCAAAGAGTTGAATCCTCAGCCACAGCCGTTCTTAGTACCGCACTCCTGTGGCGAAATCTGTGGCAAATTGCTGCAACCAAAATGTGGTCATGATTGCAAGCTCCTCTGTCATCCCGGACCGTGTCCACCCTGCGCACAACTGGCCAACAACTCATGCCTCTGCGGCAAATCGGCGCCGCGCTCCGTGCGCTGCATTGATAAGAACTGGCAGTGCCAGCAAACGTGTCAAGCGCTTTTGGCGTGTGGCAAGCACAAATGCAACCAAAGATGTCATCGTACTGGCCAATGTCCACCGTGCACGAACAAGAGTTCACAGCCCTGCGATTGCAAGCGGGAAACAAAGGTTGTTAACTGTTCCGAGCCAAGATGGAAGTGCAGTCAAGTCTGTGGTGCTCCCTTTGCGTGTGGACTGCACACCTGCGACAAGGTGTGTCATGCTGGTCCCTGCGGAGGCGGCGAATGTCCTTTGGGTCTGCGCAGCTGTCCCTGTGGCAAAACTAGCAAATCAGGTAATTGCAGCGATGTGGTGGAAACCTGTGGTGATACTTGCCACAAACTCTTGTCTTGCGGAAATCATACATGTACGCAGCGTTGTCATCGCGGTGCTTGCAACCTGTGTCTGGTGCGCACAAAGAAAAAGTGTCGTTGTGGCCTACATGAGAAGGAGCTGCCCTGCTCAAAGGATTTTACCTGCGAAACCAAGTGCAAACTGATGCGTGATTGTGGTAAACATGGCTGCAATCGCAAGTGTTGCGGCGATCAGTGTCCGCCGTGCGAGAAGATTTGCGGGAAGCAGCTGAGCTGTAACAAGCACAAGTGTCAATCCGTGTGCCACAATGGCCCTTGTTATCCCTGTAAATTGGAGTCTCAGGTGAATTGCCGCTGCGGCAAGACACGACGCAATGTGCCCTGTGGCAGGGAGAAGAGCGCACGCATTGCCTGTATGGAGCTGTGCAGAATCTCAGCCAAGTGTCATCATGCTATCAAGCATCGTTGTCACAAGGGCGAGTGCCCGCCGTGTGGTCAAGTCTGTGGCTTGCCCAACGAAACTAGCGGTTGTGGTCATCTCTGCAAGGCACGCTGTCATGCTGCCATTAGAATCAACAAGCCAACAGATGCAGCAGCACGGCAAAAAGCCAATAAAtATGAGTACCGGACGCTGCCACATCCACGCTGTGAGGAGCCTGTCAATGTCACCTGCATTGGTGGCCATGAGCTGGCCACCTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGCCAGCGCAGCTGTGCGCGAAAGTTGAAATGTGGCAATCACAGTTGTGTCTTGGTCTGTCATGCTGTACCCAAGCCACAGGACATGCAGCAGCAGGTGGGATGTGCCAATTGTGAGCAGGGGTGTGACATACCACGTCCTGCAGGCTGTGTGCATGCCTGTGCCAAAGGCTGTCATCCAGCTCCGTGTGCGCCCTGTGCTTTTGTcatcaaaaacaaatgtcaTTGTGCTCTCAATCAGGTTGTGTACAAGTGCAGTGAATTCTATATGGAAGTGGGAACTGCCCAGGAGACTGTGGAGCATCGCGAAAAGCTGGGCAGTTGTGGCAATCGTTGCCTAAAGAATTTTGCCTGTGGTCACCGCTGTCTGACCATTTGCCACTCCGGCACGTGTCCCAATCCAGAGCTGTGTCGCAAGAAAGTTCGCATTTACTGTGCCTGTAAGCGCATTAAACTAGAGGTGTCTTGCGACAAACATCGAGGCGGTCAAACATCCTTGGACTGCGATGACAACTGTCAAGCTGAACACTCCAAGGCGGTTGCTacagagcaacagcaaataGAGCAGCGACTGCGCCAGGAAGAGGCCAAGAACCGTTTAGAGTTGGAGAAATTCGAACAGAAGTTTGGCAAACGTAAGCCAAAGGAACGCAAAGCCGTTGATGTGGAGCCCACcaaaatgaatattaattGGAAGCGTGTGGCCATCTATATAGTATCGTTCCTAGCGGTAATGTTAGCCCTAGCCGTGGCTTACTATGCGGAGAGTTGA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQSSSDGSATGKRTENNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQNGNQQGHYNHLGEFVPPKRPKSMHWCCPQCRKDYQPSDRPTQYDCFCGKELNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANNSCLCGKSAPRSVRCIDKNWQCQQTCQALLACGKHKCNQRCHRTGQCPPCTNKSSQPCDCKRETKVVNCSEPRWKCSQVCGAPFACGLHTCDKVCHAGPCGGGECPLGLRSCPCGKTSKSGNCSDVVETCGDTCHKLLSCGNHTCTQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKSARIACMELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNETSGCGHLCKARCHAAIRINKPTDAAARQKANKYEYRTLPHPRCEEPVNVTCIGGHELATWPCWNSKPSSCQRSCARKLKCGNHSCVLVCHAVPKPQDMQQQVGCANCEQGCDIPRPAGCVHACAKGCHPAPCAPCAFVIKNKCHCALNQVVYKCSEFYMEVGTAQETVEHREKLGSCGNRCLKNFACGHRCLTICHSGTCPNPELCRKKVRIYCACKRIKLEVSCDKHRGGQTSLDCDDNCQAEHSKAVATEQQQIEQRLRQEEAKNRLELEKFEQKFGKRKPKERKAVDVEPTKMNINWKRVAIYIVSFLAVMLALAVAYYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01552851;
- 90% Identity
- iTF_00471292;
- 80% Identity
- -