Xvio008505.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- gatad1
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000012.1:22360137-22360983[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-10 8.7e-07 28.6 4.8 1 27 9 33 9 39 0.92
Sequence Information
- Coding Sequence
- atGCCACTCGGCAACAAACCTGAATGTGTCAAGTGTGGGACTCGAGAGACCCCGCTTTGGCACTCAACCGAAGCCGGTAACCTTTGTAATGCTTGTCTGGAAGAAGAAAGAAATTCCGAGGCGAGCTCAACTACAAAAAACGAAGATGAGGATAAAAGCGGATCGATAAAACCCACTAGAAGAAGTACAAGGATCACAAGATATTGTAATTCTAAATCAGTTCCACATAAGATTGTACCTAAaggaaaaggaagaagaaatttatttaaaaaaactCCAGTTAAAGCACCAACAGCTACAGCAACCCCAATTACGAGCAATTATGTATTTTACAAAGGAACTTATTTTCAAGTGGGCGATATAGTTTCTATGCAGGACATCGATGGAGGGATTTATTATGCACAAATTCGTGGTTTACTTACGGATCAGTACTGTGAAAAAAGTGCAGCCGTTACTTGGCTCTTGCCAACCACTGCAAGTCCACCACCTGATGAAGGATTTAGTGCAGAGACATATATCATTGGACCAGAAGAAGATCTCCCACGCAAGTTGGACTGCATGGAATTTGTAATGCATGCTCCATCAGATTATTATAAACTTAAAAATACACCATATCCACCACCACTCACAGAAAGGGGTACCGGATATATATGGACTACGCTTAGAAATGAAATTGCTACATCTAAAAAATGA
- Protein Sequence
- MPLGNKPECVKCGTRETPLWHSTEAGNLCNACLEEERNSEASSTTKNEDEDKSGSIKPTRRSTRITRYCNSKSVPHKIVPKGKGRRNLFKKTPVKAPTATATPITSNYVFYKGTYFQVGDIVSMQDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTASPPPDEGFSAETYIIGPEEDLPRKLDCMEFVMHAPSDYYKLKNTPYPPPLTERGTGYIWTTLRNEIATSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770044;
- 90% Identity
- iTF_00864321; iTF_00860803; iTF_00862244; iTF_00966343; iTF_00762925; iTF_00862958; iTF_00865006; iTF_00866389; iTF_00183638; iTF_00763574; iTF_00863641; iTF_00865689; iTF_00184282; iTF_00024958; iTF_00861567; iTF_00867071; iTF_01169537; iTF_00964162; iTF_00964803; iTF_01123363; iTF_00962188; iTF_01122765; iTF_00962873; iTF_00963550; iTF_01066626; iTF_01065924; iTF_01070027; iTF_01068656; iTF_01069329; iTF_01070740; iTF_01067289; iTF_01067966; iTF_00223556; iTF_00226277; iTF_01418693; iTF_00218790; iTF_00216071; iTF_00220937; iTF_00222217; iTF_01419337; iTF_00141517; iTF_00142765; iTF_00734253; iTF_00226958; iTF_00229038; iTF_00229710; iTF_01419982; iTF_00224240; iTF_01418064; iTF_01420624; iTF_00230993; iTF_00232305; iTF_00214706; iTF_00216755; iTF_00218099; iTF_00684499; iTF_00227636; iTF_00685108; iTF_00982644; iTF_00232917; iTF_00228342; iTF_00233590; iTF_01421239; iTF_00140952; iTF_00142168; iTF_00221624; iTF_00222872; iTF_00874136; iTF_00215385; iTF_00224921; iTF_00217434; iTF_00225594; iTF_00219483; iTF_00230395; iTF_00983323; iTF_00118365; iTF_00220159; iTF_00983903; iTF_00231680; iTF_00625836; iTF_00360591; iTF_00361287; iTF_01424723; iTF_00306645; iTF_00761304; iTF_00303482; iTF_00676380;
- 80% Identity
- -