Bpol013944.1
Basic Information
- Insect
- Bombus polaris
- Gene Symbol
- gatad1
- Assembly
- GCA_014737335.1
- Location
- JACXIO010000142.1:3428205-3429054[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 4e-06 26.6 4.6 1 27 9 33 9 39 0.92
Sequence Information
- Coding Sequence
- ATGCCTCTCGGCAATAAACCTGAATGTGTCAAGTGTGGGACTCGAGAGACCCCACTTTGGCATTCAACCGAAGCCGGTAATCTTTGCAACGATTGTCTTGAAGAAGAAAGAAATTCAGAAGCGAGTTCAAACGTAAGAAACGAAGATGAGGATAAGGGAGGTTTATTAAAACCTACCAGGCGAAGTACAAGGATTACAAGATATTGCAATTCTAAATCAGTTCCACATAAAATTATACCCAAAGGGAAAGGAAGAAGAAATTTGTTCAAAAAAACTCCAGTTAAGGCGCCAACAGCTACAGCAACTCCTGTTACAAGCAGTTATGTATTTTATAAAGGCACTTATTTTCAAGTAGGTGATATAGTTTCTATGCAGGATATTGACGGAGGAATTTATTATGCTCAAATTCGTGGTTTACTCACAGATCAATATTGTGAAAAAAGTGCTGCTGTCACTTGGCTCTTGCCTACCACTGCAAGTCCACCACCTGATGAAGGATTTAGTCCTGAGACATATATTATAGGACCAGAAGAAGATCTCCCACGCAAATTAGAATGTATGGAATTTGTAATGCATGCTCCATCAGATTATTATAAATTAAAAAATACACCATATCCCCCACCACCTACAGAACACGGTACTGGATATATCTGGACTACACTCAGAAATGAAATTGCTACATGTAAAAAATGA
- Protein Sequence
- MPLGNKPECVKCGTRETPLWHSTEAGNLCNDCLEEERNSEASSNVRNEDEDKGGLLKPTRRSTRITRYCNSKSVPHKIIPKGKGRRNLFKKTPVKAPTATATPVTSSYVFYKGTYFQVGDIVSMQDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTASPPPDEGFSPETYIIGPEEDLPRKLECMEFVMHAPSDYYKLKNTPYPPPPTEHGTGYIWTTLRNEIATCKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770044;
- 90% Identity
- iTF_01539979;
- 80% Identity
- iTF_00218790; iTF_00216071; iTF_00220937; iTF_00226958; iTF_00230993; iTF_00221624; iTF_00222872; iTF_00215385; iTF_00217434; iTF_00225594; iTF_00220159; iTF_00231680;