Pmec009602.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- gatad1
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000004.1:7992819-7993655[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 2e-06 28.5 4.5 1 26 9 32 9 35 0.95
Sequence Information
- Coding Sequence
- atGCCTCTCGGCAACAAACCTGAATGTGTCAAGTGTGGGACTCGGGAGACCCCGCTTTGGCACTCGACCGAAGCCGGTAACCTTTGCAATGCTTGCCTTGAAGAGAGAAATTCTGAAACGAGTTCCATCAGTAGGAACGAGGAGGAGGACAAGGGAGGTTCGTTGAAGCCTACCAGAAGAAGTACCAGGATTACAAGATATTGTAATTCCAAGTCAACTGTTCCGCACAAGGTCGTACCTAAAGGAAAAGGACGAAGGAACTTGTTTAAGAAAACTccGGTTAAAGCGccaacagcaacagcaacgCCAGTTACTAGTAATTTTGTGTTCTACAAAGGTACTTATTTTCAAGTGGGCGATATAGTTTCCATGCAAGATATCGACGGAGGAATCTATTATGCTCAAATACGAGGTTTACTTACAGATCAGTACTGTGAAAAGAGCGCTGCTGTTACTTGGCTCTTGCCCACGACAGCAAGCCCACCACCGGACGAAGGGTTTAGCCCTGAAACTTACATTATAGGCCCAGAGGAAGATTTGCCACGTAAGCTGGAATGTATGGAATTTGTTATGCATGCTCCATcagattattataaattaaagaatacaCCATATCCACCACTGcttgcagaaaaaaatattggatatGTGTGGACTACTCTTAGAAATGAAATCGCTATGTctagaaaataa
- Protein Sequence
- MPLGNKPECVKCGTRETPLWHSTEAGNLCNACLEERNSETSSISRNEEEDKGGSLKPTRRSTRITRYCNSKSTVPHKVVPKGKGRRNLFKKTPVKAPTATATPVTSNFVFYKGTYFQVGDIVSMQDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTASPPPDEGFSPETYIIGPEEDLPRKLECMEFVMHAPSDYYKLKNTPYPPLLAEKNIGYVWTTLRNEIAMSRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770044;
- 90% Identity
- iTF_01539979;
- 80% Identity
- -