Cgig002773.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- gatad1
- Assembly
- GCA_013123115.1
- Location
- WUUM01000009.1:7735060-7736276[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-10 4.3e-07 29.2 4.3 1 28 9 34 9 42 0.88
Sequence Information
- Coding Sequence
- ATGCCTCTCGGCAGTAAACCCGAATGTGTGAAGTGTGGGACTCAAGAGACCCCACTTTGGCACTCAACCGAAGCCGGTAACCTTTGTAATGCCTGTctcgaagaagaaagaagtTCTGAGACGAATCCGAACGTTAGAAACGAAGAGGAGGATAAAGCAGGATCACTGAAGCCTACCAGAAGGAGTACAAGAATAACAAGATACTGCAATTCAAAGTCTGCTCTTCCACACAAAGTAGTCCCTAAAGGAAAAGgacgaagaaatttatttaaaaaaactccGGTTAAAGCACCAACAGCTACAGCAACTCCGGTTAcaagtaattttgtattttacaaaGGTACTTACTTTCAAGTGGGTGATATAGTTTCTATGCAAGATATTGATGGAGGAATTTATTATGCTCAAATTCGTGGTTTACTCACAGATCAATATTGTGAGAAAAGTGCTGCTGTTACTTGGCTCTTACCTACCACATCAagcccACCACCAGATAAAGGATTTAGTCCTGAAACATATATTATAGGTCTAGAAGAAGATCTTCCACGCAAACTGGAATGTATGGAATTTGTAATGCATGCACCATCAGATtactacaaattaaaaaatacaccaTATCCACCACCACTGACAGAAAGAGGTACTGGATATATATGGACTACActtagaaatgaaattactacatctaaaaaataa
- Protein Sequence
- MPLGSKPECVKCGTQETPLWHSTEAGNLCNACLEEERSSETNPNVRNEEEDKAGSLKPTRRSTRITRYCNSKSALPHKVVPKGKGRRNLFKKTPVKAPTATATPVTSNFVFYKGTYFQVGDIVSMQDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTSSPPPDKGFSPETYIIGLEEDLPRKLECMEFVMHAPSDYYKLKNTPYPPPLTERGTGYIWTTLRNEITTSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770044;
- 90% Identity
- iTF_01539979;
- 80% Identity
- iTF_00360591;