Basic Information

Insect: Xanthia icteritia
Gene Symbol: -
Assembly: GCA_949128155.2
Location: OY855862.1:6686937-6692145[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0014 0.15 13.7 0.9 1 23 77 99 77 99 0.93

2 25 0.019 2 10.2 0.4 1 23 172 194 172 194 0.98

3 25 0.0021 0.22 13.2 0.2 1 23 198 220 198 220 0.95

4 25 0.0094 1 11.1 0.3 1 23 225 248 225 248 0.95

5 25 0.0017 0.18 13.5 3.4 1 23 254 277 254 277 0.96

6 25 0.14 15 7.4 0.5 1 11 284 294 284 297 0.92

7 25 0.41 44 6.0 2.1 1 23 413 436 413 436 0.94

8 25 2.1 2.2e+02 3.8 0.1 2 23 461 483 460 483 0.93

9 25 0.19 20 7.0 0.1 1 23 507 529 507 529 0.93

10 25 0.00017 0.018 16.6 0.2 1 23 533 555 533 555 0.98

11 25 0.00018 0.019 16.5 0.5 1 23 560 583 560 583 0.96

12 25 0.013 1.4 10.7 0.4 2 23 590 612 590 612 0.93

13 25 0.12 13 7.6 6.5 1 23 619 642 619 642 0.96

14 25 9.7e-05 0.01 17.4 4.7 2 23 649 670 648 670 0.96

15 25 0.00024 0.026 16.1 1.7 1 23 676 698 676 698 0.98

16 25 0.2 21 7.0 0.1 1 23 845 868 845 868 0.88

17 25 0.34 36 6.2 0.2 2 23 894 915 893 915 0.95

18 25 0.028 3 9.6 0.3 1 23 937 959 937 959 0.98

19 25 4e-05 0.0043 18.6 0.1 1 23 963 985 963 985 0.98

20 25 0.0013 0.14 13.8 1.4 1 23 990 1013 990 1013 0.93

21 25 8.2e-05 0.0088 17.6 0.5 2 23 1020 1042 1020 1042 0.97

22 25 9.1e-05 0.0097 17.5 1.1 1 23 1049 1072 1049 1072 0.98

23 25 0.0031 0.34 12.6 4.7 1 23 1078 1100 1078 1100 0.97

24 25 4.2e-05 0.0045 18.5 2.5 1 23 1106 1128 1106 1128 0.97

25 25 0.2 21 7.0 0.1 3 23 1133 1154 1132 1154 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0014	0.15	13.7	0.9	1	23	77	99	77	99	0.93
2	25	0.019	2	10.2	0.4	1	23	172	194	172	194	0.98
3	25	0.0021	0.22	13.2	0.2	1	23	198	220	198	220	0.95
4	25	0.0094	1	11.1	0.3	1	23	225	248	225	248	0.95
5	25	0.0017	0.18	13.5	3.4	1	23	254	277	254	277	0.96
6	25	0.14	15	7.4	0.5	1	11	284	294	284	297	0.92
7	25	0.41	44	6.0	2.1	1	23	413	436	413	436	0.94
8	25	2.1	2.2e+02	3.8	0.1	2	23	461	483	460	483	0.93
9	25	0.19	20	7.0	0.1	1	23	507	529	507	529	0.93
10	25	0.00017	0.018	16.6	0.2	1	23	533	555	533	555	0.98
11	25	0.00018	0.019	16.5	0.5	1	23	560	583	560	583	0.96
12	25	0.013	1.4	10.7	0.4	2	23	590	612	590	612	0.93
13	25	0.12	13	7.6	6.5	1	23	619	642	619	642	0.96
14	25	9.7e-05	0.01	17.4	4.7	2	23	649	670	648	670	0.96
15	25	0.00024	0.026	16.1	1.7	1	23	676	698	676	698	0.98
16	25	0.2	21	7.0	0.1	1	23	845	868	845	868	0.88
17	25	0.34	36	6.2	0.2	2	23	894	915	893	915	0.95
18	25	0.028	3	9.6	0.3	1	23	937	959	937	959	0.98
19	25	4e-05	0.0043	18.6	0.1	1	23	963	985	963	985	0.98
20	25	0.0013	0.14	13.8	1.4	1	23	990	1013	990	1013	0.93
21	25	8.2e-05	0.0088	17.6	0.5	2	23	1020	1042	1020	1042	0.97
22	25	9.1e-05	0.0097	17.5	1.1	1	23	1049	1072	1049	1072	0.98
23	25	0.0031	0.34	12.6	4.7	1	23	1078	1100	1078	1100	0.97
24	25	4.2e-05	0.0045	18.5	2.5	1	23	1106	1128	1106	1128	0.97
25	25	0.2	21	7.0	0.1	3	23	1133	1154	1132	1154	0.95

Sequence Information

Coding Sequence: ATGAAAAAAGAGAATTGTTACATACAAAAAGTCgcgccttcttcctatggggGTGACGAACTATCTGACGAAGATTGCCATGTAGAAAATATTGGAAATACTGAATTCAAGGCACGGATCGCAGAACGAAAGAAAAACTTTACCGACGACATTAAAGCTAGGACAAGGCACGCAATCATACTTCTGGAATCAACGAAAATATGCCCCTTCAAATGGATGAAAAATCTATACATTTGtttctattgccatcaacagttCTCTGACCCAGCAACATTGAGGGTTCATAACATAGAACACGGTTTTCTGACGACATCGCAAGTCAAATACGCTTTGTCGAAGCTGAAGAAGTACGAATTAGTCAAAGTAGATATTACTGATATCGGTTGCAAGCTCTGCGACGACCTGATCCCAGATTTCCCGACCCTAAAATGGCATCTGCTAGAAAAGCATAAGAAGAATTTGGATCCGAAATCTGGGGATGGTGTCCTTCCGTTCAAAGTTACAGTCAACGACTTCCCATGCGCCCTCTGCTTAGAAAAATACACTGAATTCAAGTCTCTTAACCAGCATATGAACGTACATTTCCAAAATTTCATTTGCGAGCAATGTGGCACTGGTTTCATAACACCAGAACGTTTGAGGACTCACGCGTTCTCGCACGAAACAGGATCGTTTCCTTGCGATAGTTGCGACAAAGTATTTAGGTCTACCAACGCTAAAAACGAACATTACGCTACCGTACATATGAAAGTAAAAAGACATAGGTGTCCACATTGTCCTGAAGCATTTCGAAACTActttcagagaaataaacatatttcgtCCATCCACGGTTTGAAGTTAAAAGAATTCAAGTGCACTATGTGTCCTAAAGTTTTCACTATCAGTGGAACGGACTCCGAAATACCTGATACGAAGCGAAGAGTCATCCCGTTATTCCAAGTTTCTTACGACCGAAGCTTGTGTAGACCTCTCGGGACATTAATAGACTTCAGTAGATTCCGACAAAAGAGTATTAAAGCCTTCTCTTCACCTCCAACACGAGATTTTTCTCCGTCTCGCAGTCCATCTCCTGTTTATCTAGGGACTACATCATCGCCTTATATTGATATTACGCCGACTATATCCGTCCAAACTGTGAAaccaaaaatgaagaaaactCCAGATATCAGGCAGAATGCTCTGGCTGTGTTTGAATTTTCAACGGTCTACCCGTTTGTTTATGGCAGCAATAAGTTCAAATGTTTCGTTTGCTCGCAACCGTTTCTGGACTTAAATGAATTGAAGCTGCACATGCACTTCTCCCACACCTTTGCTCCTCTTAAGAGACTTGTTAATAATAGAAGAGAAAATGTCTTAAAAGTAGATGTAAGTGATATAACCTGCAAGATATGTTCAGAAAAACCTCCTAACCTTGTCGAAATGAAGCGTCACCTCAAAGAACTACACGAAAAGCCAATGGATTTAGAAATTCAAGACAATATGATCCCGTTCAATCTTGAATTAGTAGACGATGCCTACAAATGCGTTATATGCGAACAGAGTTTCATAAAAGTACGAATTTTAGTTATACATATGAGTGAACACTTCAATAATTATAGCTGCGAGATTTGTGGATCAGTGTTCATGACTTTACGGCTCTTGAAGAAACATTTAGAGGTGCATGATTCTGGAAACTTTCCTTGCGATCGATGCAATAAAGTCTTTAGCACTCCTTATAAACGGACTTTACATATCCGAGGCGTGCATCTAAAGCAGTGTCCTAGAAGATGTCCAATGTGTCCAGAAAAATTCAATTCGAATTACAAAAGGACTATTCATTTACAAGATGTCCATAATCAGGAGACTAGAGTGCATAAATGCAAGACTTGCGGTCGAGGATTCAATCTGAAGTATCATTTGGTCTGTCACGTGCGTTCTGTCCATCTCCAGGAGAGGAATCAACAGTGCGATGTGTGTCACCAAAGGTTTTGTAATAAGGAGTCTTTGAAGCGTCACATGGTTATACATACTGGGGAGAAGAATCATAAGTGTGATGTTTGTGGGATGGCGTTTTTGAGAAGGAAGAATCTGAAGGATCATTTGCGTTTGCATGATATTAgtATCATCCAGAAATCAAACTCCACGATCACTCTGAAAGACGAAGATGGAACAGAAATTAAGCTCACAGTTCTCAAATATCCAATTTCTTTAGATACTCTACAATATGAAACTCAAGATATTACCGCCAaccataacattaaaaataaacaaaaaaagaaaatcggCAAAAAGAAAGAAGTTAAGAAGAACAACGTCAAGTTAGAAAACATATCTTTGTTGAAAGAACCAGTCTCTATAAATAATGTCGATTGGAGAAACCATAATGAGCAAGAAAATTCGGTGACATTCAATGTAAAAACTGTACAGGGATATATCCGTGCACCAACGAGACAAAGAAGCGAAAACGTTGACTATGAAACCTGGAAACAGAATGCATTaatcatttttgaaaattcttatgTCTATCCATTTGTGCATGCGGGTAACAAATACAAATGCGTCATCTGCTCCAAGCCCTTCCTAGACGCTATTCTATTGAAAGACCATAGTATAAACGAACATACAATCAAAGAAATGAAACGAGCATTAAATAATAGAGTTAGAGATAAACACCTTAAAGTAGACGTCACATATCTCCAGTGTAAGATTTGTTTGCAATCACCACCTGATCTGCAGAACTTGAAAACACATTTAAAGGAGCATGGCAAGAAAATACAGCCGGATTTGCAAGATAATATAATACCTTACAAGCTTGGAGGCGAGAATTTCGAATGTCAAGTATGCGGGGAAAAGTATCTTAAACTACGGCTCCTAATTATCCATATGAGTAAACATTTCAACAATTACAGCTGTGAAATATGCGGTTCTGTATTCATATCACTGCAATTACTAAAAAGACATCTACAGATTCACGAATCAGGGAGCTTTCCCTGCAACAAATGCGATAAAGTGTTCACGAACTCTACAAAAAGGTCACTACACTACAAAGGAGTGCATCTGAAGCAATTTCCGCGAAGATGCCCAATTTGTCCCGAAAGATTCAACTCAAATTATCAAAGAACGAAACACTTGCGTATAGCACATAATCAATCAACTGGGTTGTATCGATGTGACACTTGTGGTCGGGAATACGACTTGAAATACCATCTTCTCGTCCACATAAGGTCTGTACATCTTCAAGAGAGGAATCATGAGTGCCCAATGTGTAATTCGAGATTTTTCTCCAAGTATTGTCTTTCGAGGCATATGATTATACATACAGGGGAGAAGAATTTCAAATGTGAGGTTTGTGGGAAGGCGTATGCAAGGAGTAAGAACCTTCGAGACCATTGCAGGTCCCATGAAGTCGGATTGTGTGCTATTTGTGGTCTTAACTGTGGGGATTATAACAATCTCGTCGCTCATGTTAATAACGTGCATTGA
Protein Sequence: MKKENCYIQKVAPSSYGGDELSDEDCHVENIGNTEFKARIAERKKNFTDDIKARTRHAIILLESTKICPFKWMKNLYICFYCHQQFSDPATLRVHNIEHGFLTTSQVKYALSKLKKYELVKVDITDIGCKLCDDLIPDFPTLKWHLLEKHKKNLDPKSGDGVLPFKVTVNDFPCALCLEKYTEFKSLNQHMNVHFQNFICEQCGTGFITPERLRTHAFSHETGSFPCDSCDKVFRSTNAKNEHYATVHMKVKRHRCPHCPEAFRNYFQRNKHISSIHGLKLKEFKCTMCPKVFTISGTDSEIPDTKRRVIPLFQVSYDRSLCRPLGTLIDFSRFRQKSIKAFSSPPTRDFSPSRSPSPVYLGTTSSPYIDITPTISVQTVKPKMKKTPDIRQNALAVFEFSTVYPFVYGSNKFKCFVCSQPFLDLNELKLHMHFSHTFAPLKRLVNNRRENVLKVDVSDITCKICSEKPPNLVEMKRHLKELHEKPMDLEIQDNMIPFNLELVDDAYKCVICEQSFIKVRILVIHMSEHFNNYSCEICGSVFMTLRLLKKHLEVHDSGNFPCDRCNKVFSTPYKRTLHIRGVHLKQCPRRCPMCPEKFNSNYKRTIHLQDVHNQETRVHKCKTCGRGFNLKYHLVCHVRSVHLQERNQQCDVCHQRFCNKESLKRHMVIHTGEKNHKCDVCGMAFLRRKNLKDHLRLHDISIIQKSNSTITLKDEDGTEIKLTVLKYPISLDTLQYETQDITANHNIKNKQKKKIGKKKEVKKNNVKLENISLLKEPVSINNVDWRNHNEQENSVTFNVKTVQGYIRAPTRQRSENVDYETWKQNALIIFENSYVYPFVHAGNKYKCVICSKPFLDAILLKDHSINEHTIKEMKRALNNRVRDKHLKVDVTYLQCKICLQSPPDLQNLKTHLKEHGKKIQPDLQDNIIPYKLGGENFECQVCGEKYLKLRLLIIHMSKHFNNYSCEICGSVFISLQLLKRHLQIHESGSFPCNKCDKVFTNSTKRSLHYKGVHLKQFPRRCPICPERFNSNYQRTKHLRIAHNQSTGLYRCDTCGREYDLKYHLLVHIRSVHLQERNHECPMCNSRFFSKYCLSRHMIIHTGEKNFKCEVCGKAYARSKNLRDHCRSHEVGLCAICGLNCGDYNNLVAHVNNVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121667; iTF_00375555; iTF_01339249; iTF_01527572; iTF_00667765; iTF_01095159; iTF_01093341; iTF_00758467; iTF_00173454; iTF_01425310;
90% Identity: iTF_01095159;
80% Identity: -