Vina018369.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Volucella inanis
Gene Symbol
sip1
Assembly
GCA_907269105.1
Location
OU026155.1:38199644-38208890[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-92 3.5e-88 296.8 17.2 2 275 392 658 391 658 0.98
2 2 0.13 1.6e+03 -0.6 0.1 203 229 677 703 661 721 0.64

Sequence Information

Coding Sequence
ATGTCGGACAATGAGTATGAAGCTTTTGAAATCACGGATTATGATTTGGCAAACGAGTTTAATCCAAATCGTCCACGGCGGAATCTTACAAAGAATCAACAGATTTacgGAATATGGGCCGACAGTGATAGCGATAATGATAGCGATGTGGAGATGATTGGCCGTCGCGGGAAAGGTCGTAATACAGGACCTGTTAATTTTGTTACTGGTGGTATACAACAGCCTGGTAGCAGCAATGTGGAAAATGAGAAGGACAGGGATGTTGATAATCAGATAACGGATGAAGaggATGAACGTTCAGCACGACAAGGAATAAGAAACGTTACATCAAATGGTTCTAGTAACTCTTCATCAGATGAAGATAGTGGAACGCAAATGCGCGCAGGATTGGGAATGCGTCAGCGGCAACCTGCTTCCAGTACAAAGTCTATGGGTGCATGGGAGCAGCATACCAAAGGAATAGGGGCGAAGTTATTACTTCAAATGGGATACAAACCAGGCATGGGTTTGGGAAAGGATTTGCAAGGTATATCACAACCAGTACAGGCACATTTGCGAAAAGGAAGGGGCGCTATTGGTGCATACGGTCCGGAAACGCCAGTCACTATCGGTGATAAGCttcaagcaaaacaaaaagacgATGATAATGCTCGCGACGTAAAtgattataaagaaaatttgaacaaatggAAACGAGATGATGGCAAAAGGGAATCGAAAAAAAGTCGGTACTATTATCGAAGCGTTGAAGAGGTAATCGAAGGAGGTAAGAAGACCTCTTGTGGAATGACCCCAGACAAATTGAGTGAAAAACTCGGTAATGTTCCCGTTATTGACATGACGGGTCCTGAAAAGCGCGTACTAAGCGGCTATCATGCTTTaggacaaacaaaaattattgacgACGTATTATATAGtaatgaaaaggaaaaggaaggTTTTGCTTTACCAGAATTAATGCATAATCTGAATTTGATAGTGAATATGTGTGAGCAAGATATCATAGCAATAGATAAGGCCGAGCGAGAAGCAAAAGATAAACAGGCTGCTCTtgaacacgaaaaaaaaaatcttgaaaagatAGTTAAACTAGAAGAAAATCATGTCGATACACTTGAGAAACTTTTGACATTGGTCGATGAGCTTACGAGCAACACTGAAAACCTCACTCTTGCTCGCGCAGAGAGTATATTTATAACCCTTCAATATGATTTTGCTGTAGAATATAAAGAATTTGCTTTAGGCGATTTAGCTGCTGGAATTATTGCCCCAATGGTTAATAATGAGCTTAAGTCTTGGAAACCTCTGGAGGAGCCAACCAAATTCATaaactttgttaaaaaatggaGATCTATATTAGAAATGCATCAttcagaagaaagaaataatgttttcgaTCCATATTCATCTCTGATTTGGGTTGGTGTTATTCCCAGCTTTAGGTCAACAGTAAGTGAATGGAATCCAAAAATGCATCAAAAAATGGCGGCTCTTTTAGACAGTTGGGCACCATTATTTCCAACTTGGGTCTTAGATAATGTGttagaacaattaattttaCCTAGGCTTGTAAGTGGTGTTAAGGAATGGGACCCATTAACAGATACCATTCCAATTCATAGTTGGATTCTCCCATGGAATACAATATTGGGTCATAAAATGGAAGAATTTATATTCCCAACCATAAGAGAGAAATTAGGCAACGCTTTGCAAGCCTGGATACCGCAAGATCGTTCCGCAAGGGCAATGCTTACTCCATGGAAGGATGCTTTTGAGGCGGGAGAAATGCAAGCTTTTCTTTTAAAGCATATCATTCCTAAGCTACAATTGGCACTAAACGAGATGGTTATCAACCCCCTTCAACAGGATTTGGagCTTTGGAATCAAGTCTGGGAATGGAATGAGATGATACCACCTTTGCTCATGGCTCAAAtgcttgataaatatttttttccgaaatggATGCAAGTTCTTGTGCTGTGGCTTAACCAGTCACCTGACTTTGATCAAATTTCTCGTTGGTACGCCGGATGGAAGACGATCTTTGGTGAAGAAATTATGAAGCAACCAATTATTAAAGAACATCTCCGTCGAGTACTGGAAATGATGCATAGAGCAACAGAGACAATTGTTCAAGCTCAAAACACTGCGACACCCTTATTGTCGCCGCAAACTTCAACTGGCCCTCCGGCATTAATGGACTTACAAATTGCTCCTCCAACACAACTTGAGTTTAAAGAACTAGTTTCACAGAAATGTGCTGAACGTGGCATTATATTTGCACCGATGCCTGGACGTAGGGAATTTGGCAAGCAGGTATATCGTATTGGCAAGTTATTTTGCTATATTGATCGCAACGTAGTTATGCTGAGCGATGGAAGTTTGAAAAGTTGGACTCCTTCTTCACTAGGGCTAACTATAGAAAGGGCTGTATCTGGATAG
Protein Sequence
MSDNEYEAFEITDYDLANEFNPNRPRRNLTKNQQIYGIWADSDSDNDSDVEMIGRRGKGRNTGPVNFVTGGIQQPGSSNVENEKDRDVDNQITDEEDERSARQGIRNVTSNGSSNSSSDEDSGTQMRAGLGMRQRQPASSTKSMGAWEQHTKGIGAKLLLQMGYKPGMGLGKDLQGISQPVQAHLRKGRGAIGAYGPETPVTIGDKLQAKQKDDDNARDVNDYKENLNKWKRDDGKRESKKSRYYYRSVEEVIEGGKKTSCGMTPDKLSEKLGNVPVIDMTGPEKRVLSGYHALGQTKIIDDVLYSNEKEKEGFALPELMHNLNLIVNMCEQDIIAIDKAEREAKDKQAALEHEKKNLEKIVKLEENHVDTLEKLLTLVDELTSNTENLTLARAESIFITLQYDFAVEYKEFALGDLAAGIIAPMVNNELKSWKPLEEPTKFINFVKKWRSILEMHHSEERNNVFDPYSSLIWVGVIPSFRSTVSEWNPKMHQKMAALLDSWAPLFPTWVLDNVLEQLILPRLVSGVKEWDPLTDTIPIHSWILPWNTILGHKMEEFIFPTIREKLGNALQAWIPQDRSARAMLTPWKDAFEAGEMQAFLLKHIIPKLQLALNEMVINPLQQDLELWNQVWEWNEMIPPLLMAQMLDKYFFPKWMQVLVLWLNQSPDFDQISRWYAGWKTIFGEEIMKQPIIKEHLRRVLEMMHRATETIVQAQNTATPLLSPQTSTGPPALMDLQIAPPTQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRIGKLFCYIDRNVVMLSDGSLKSWTPSSLGLTIERAVSG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01542208;
90% Identity
iTF_01521085;
80% Identity
-