Vbom036680.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- sip1
- Assembly
- GCA_949129095.1
- Location
- OX422141.1:45810884-45822439[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-94 4.2e-89 301.2 17.9 1 275 391 658 391 658 0.98 2 2 0.34 1.7e+04 -2.5 0.0 204 226 678 700 664 717 0.57
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAAGCTTTTGAAATCACGGATTACGATTTGGCAAACGAGTTTAATCCAAATCGTCCACGGCGGAAACTTACaaagaatcaaaaaatttatggAATATGGGCCGACAGTGATAGCGATAATGATAGCGATGTGGAGATGACTGCCCGTCGCGGGAAAGGCCGTAGTACAGGACCTGTTAATTTTGTTACTGGTGGTATACAACAGCCTGGTAGCAGCAATGTGGAAAGTGACAAGGACAGGGATGTTGATAATCAGATAACGGATGAAGagGACGAACGTTCAGCTCAACAAGGAATAAAACACGTTACATCAAATGGTTCTAGTAACTCTTCATCAGATGAAGATGGTGGAACGCAAATGCGCGCAGGATTGGGTATGCGTCAGCGGCAACCTGCTTCCAATACAAAACCCATGGGTGCATGGGAACAGCATACCAAAGGAATAGGGGCGAAGTTGTTACTTCAAATGGGATACAAACCAGGCAAGGGTTTGGGAAAGGATTTGCAAGGTATATCACAACCAGTACAAGCACATTTGCGAAAAGGAAGAGGCGCTATTGGTGCATACGGCCCGGAAACACCAGCCACTATCGGTGATAAGCTTCAGGCAAAACAAAATGACGATGATAATGCTCGCGACGTAAAtgattataaagaaaatttgaacaaatgGAAACGAGATGATGGCAAAAAGGAATCTAAAAAAAGCCGATATTATTATCGAAGCGTTGAAGAGGTAATCGAAAGAGGCAAGAAAACATCTTGTGGAATAACCCCAGACAAATTGAGTAAAAAACTAGGTAATGTTCCCGTGATTGACATGACAGGTCCTGAAAAACGCGTACTAAGCGGCTATCATGCTTTAggtcaaacaaaaattattgatgacGAATTATATGGTAATGAAAAGGAGAAGGAAGGTTTTGCTTTACCAGAACTAATGCATAATCTGAATTTGATAGTGAATATGTGTGAGCAAGATATCATAGCAATAGATAAGGCCGAACGAGAAGCAAAAGATAAACAGTCTGCTCttgaacatgaaaaaaaaaatcttgaaaagatAATTAAACTAGAAGAAAATCATGTCGATACACTTGAGAAACTTTTGATATTAGTCGAGGAGCTTACGAACAACACTGAAAACCTCAGTCTCAATCGCGCGGAGAGTATATTTATAGACCTTCAACATGATTTTGCTGTAGAATACAAAGAATTTGCTTTGGGCGATTTAGCTGCTGGAATTATTGCCCCAATGGTTAATAATGAGCTTAAGTCTTGGAAACCTCTGGAGGagccaacaaaattcataaacaCAGTTAAAAAATGGAGATCTATATTAGAAATGCATCATTCAGAAGAACGAAATAATGTTTTTGATCCTTATTCATCTCTGATTTGGGTTGGTGTTATTCCTAGCTTTAGATCAACAGTAAATGAATGGAATCCGAAAATGCATCAAAAAATGGCGGCTCTTTTAGACAGTTGGGCACCATTATTTCCAACTTGGGTGTTAGATAATGTGTTAGAACAATTAATTTTACCTAGGCTTGTAAGTGGTGTTAAGGAATGGGACCCATTAACAGATACCATTCCAATTCATAGTTGGATTCTCCCATGGAATACAATATTGGGCCataaaatggaagaatttataTTTCCAACCATAAGGGAGAAATTAGGCAACGCTTTGCAAGCCTGGATACCGCAAGATCGTTCCGCAAGGGCAATGCTTACTCCATGGAAGGATGCTTTTGAGTCGGGAGAAATGCAAGCTTTTCTTTTAAAGCACATCATTCCTAAGCTACAAATGGCACTAAATGAGATGGTTATCAACCCCCTTCAACAGGATTTGGaGCTTTGGAATCAAGTCTGGGAATGGAATGAGATGATACCACCTTTGCTCATGGCTCAAATGCTTGATAAGTATTTTTTCCCGAAATGGATGCAAGTTCTTGTCTTGTGGCTTAACCAGTCACCAGACTTTGATCAAATTTCTCGTTGGTATGCCGGATGGAAGACGATTTTTGGTGAAGAAATTATAAAGCAACCTATTATTAAAGAACATCTCCGTCGAGTACTGGAAATGATGCATAGAGCAACAGAGACAATTGTTCAATCTCAAAATACTGCGACACCTTTATTGTCGCCGCAAGCTTCAGCTGGACCTCCGGCATTAATGGACTTACAAATTGCTCCTCCAACACAACTTGAGTTTAAAGAACTTGTTTCACAGAAATGTGCCGAACGTGGCATTATATTTGCACCGATGCCTGGACGTAGGGAATTTGGCAAGCAGGTATATCGTGTTGGCAAGTTGTTTTGCTATATTGATCGCAATGTTGTTATGTTGAGCGATGGAAGTTTGAAAAGTTGGACTCCTTCTTCATTAGGGCTAACAATAGAGAGGGCTGTATCTGGGTAG
- Protein Sequence
- MSDNEYEAFEITDYDLANEFNPNRPRRKLTKNQKIYGIWADSDSDNDSDVEMTARRGKGRSTGPVNFVTGGIQQPGSSNVESDKDRDVDNQITDEEDERSAQQGIKHVTSNGSSNSSSDEDGGTQMRAGLGMRQRQPASNTKPMGAWEQHTKGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHLRKGRGAIGAYGPETPATIGDKLQAKQNDDDNARDVNDYKENLNKWKRDDGKKESKKSRYYYRSVEEVIERGKKTSCGITPDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKIIDDELYGNEKEKEGFALPELMHNLNLIVNMCEQDIIAIDKAEREAKDKQSALEHEKKNLEKIIKLEENHVDTLEKLLILVEELTNNTENLSLNRAESIFIDLQHDFAVEYKEFALGDLAAGIIAPMVNNELKSWKPLEEPTKFINTVKKWRSILEMHHSEERNNVFDPYSSLIWVGVIPSFRSTVNEWNPKMHQKMAALLDSWAPLFPTWVLDNVLEQLILPRLVSGVKEWDPLTDTIPIHSWILPWNTILGHKMEEFIFPTIREKLGNALQAWIPQDRSARAMLTPWKDAFESGEMQAFLLKHIIPKLQMALNEMVINPLQQDLELWNQVWEWNEMIPPLLMAQMLDKYFFPKWMQVLVLWLNQSPDFDQISRWYAGWKTIFGEEIIKQPIIKEHLRRVLEMMHRATETIVQSQNTATPLLSPQASAGPPALMDLQIAPPTQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKSWTPSSLGLTIERAVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542208;
- 90% Identity
- iTF_01522662; iTF_01521884;
- 80% Identity
- -