Basic Information

Insect: Vollenhovia emeryi
Gene Symbol: svp
Assembly: GCA_000949405.1
Location: NW:1760655-1891816[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.045 1.5e+02 1.1 0.6 135 162 66 93 40 106 0.77

2 2 4.5e-44 1.5e-40 139.5 0.1 211 404 241 431 224 436 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.045	1.5e+02	1.1	0.6	135	162	66	93	40	106	0.77
2	2	4.5e-44	1.5e-40	139.5	0.1	211	404	241	431	224	436	0.93

Sequence Information

Coding Sequence: ATGGCGTTGGTCGCGCCGCCGCCCTCCTGGGCCTCGCGGGACCCCGGGGCCGCCCTGGGCGcagccggcggcggcggcggtggcggcggcgggccCCTTCAGGTaggcccgccgccgccgatgcCGCCCGCGCATCTGACGCCCTCGGCCACGCCGGAGGATATCACCTGTCTGGTGCCCGCCGGCTCGGTTCTGACCTCGAGGGACCCCCTGCCGCCCAGTACCACCCCCGGCAGCCAGGCCAATAGCTCCCAGTCCGGCAGCTCGCAAACGGATAAGTCGCCGAACATCGAGTGCGTCGTCTGCGGGGACAAAAGCAGCGGCAAACATTACGGACAGTTTACTTGCGAAGGGTGCAAGAGTTTCTTCAAGAGGAGTGTCAGGCGGAATCTAACGTACTCGTGTCGAGGGACTAGAAATTGTCCGATCGACCAACATCATAGAAACCAGTGCCAGTTTTGCCGCTTGAAAAAGTGCCTGAAGATGGGCATGCGCCGGGAAGGTATGCACTCTGTGCAGAGGGGGCGAGTGCCGCCGTCGCAACCCTCGCTGCCGGGTCTGCCGGGCCAGTTCGCCCTGACGAACGGGGACGCGGTCGCGTGTGCCAGCCTAAACGGACACTCTTACCTCTCGTCGTATATAAGCCTGCTGCTGAGGGCGGAGCCCTATCCGACCTCGAGATACGGCCAGTGCATGCAGCCCAACAACATCATGGGTATCGACAATATCTGCGAGCTCGCGGCGCGGCTGCTCTTCTCGGCGGTCGAGTGGGCCCGGAACATCCCGTTCTTCCCGGATCTTCAGGTGACGGACCAGGTGGCCCTGCTCAGGCTAGTGTGGAGCGAGCTGTTCGTCCTGAACGCGAGCCAGTGTTCGATGCCCCTCCACGTGGCGCCGCTTCTAGCGGCGGCGGGCCTCCACGCCTCGCCGATGGCGGCGGACCGCGTGGTCGCCTTCATGGATCACATCAGGATCTTCCAGGAGCAAGTGGAGAAACTCAAGGCGCTCCACGTCGACTCCGCGGAATACAGCTGCCTCAAGGCCATCGTCCTCTTCACCACCGACGCCTGTGGTCTCTCGGACGTGGCGCACATCGAGTCCCTTCAGGAAAAGTCGCAGTGCGCCTTGGAGGAGTACTGCCGGACCCAGTACCCGAATCAGCCGACAAGGTTCGGCAAGCTGCTGCTGCGATTGCCGTCGTTACGCACGGTCTCGTCGCAGGTGATCGAGCAGCTCTTCTTCGTGCGGCTGGTGGGCAAGACGCCGATCGAGACGCTTATCAGGGACATGCTGCTGAGCGGCAACAGCTTCAACTGGCCCTACATATCCACGATGTGA
Protein Sequence: MALVAPPPSWASRDPGAALGAAGGGGGGGGGPLQVGPPPPMPPAHLTPSATPEDITCLVPAGSVLTSRDPLPPSTTPGSQANSSQSGSSQTDKSPNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGTRNCPIDQHHRNQCQFCRLKKCLKMGMRREGMHSVQRGRVPPSQPSLPGLPGQFALTNGDAVACASLNGHSYLSSYISLLLRAEPYPTSRYGQCMQPNNIMGIDNICELAARLLFSAVEWARNIPFFPDLQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAAAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTTDACGLSDVAHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLRTVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGNSFNWPYISTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00604872;
90% Identity: iTF_01270538;
80% Identity: iTF_01477603;