Basic Information

Insect: Vespa mandarinia
Gene Symbol: RREB1
Assembly: GCA_014083535.1
Location: JACHAV010000017.1:80030-88723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 79 3.5 0.7 1 23 42 64 42 64 0.93

2 16 0.00034 0.024 14.6 0.3 1 23 78 100 78 100 0.97

3 16 1.4e-06 0.0001 22.0 0.8 1 23 106 129 106 129 0.97

4 16 0.059 4.2 7.5 0.1 1 23 225 249 225 249 0.93

5 16 0.77 55 4.0 1.7 2 23 255 277 255 277 0.91

6 16 3.1 2.2e+02 2.1 1.9 1 20 333 352 333 354 0.85

7 16 0.13 9.4 6.4 0.1 1 23 384 406 384 406 0.96

8 16 1.9e-05 0.0014 18.5 0.3 1 23 415 437 415 437 0.98

9 16 0.00085 0.061 13.3 2.8 1 23 443 466 443 466 0.97

10 16 0.0009 0.065 13.2 2.7 1 23 867 890 867 890 0.96

11 16 0.00045 0.032 14.2 0.1 3 23 1171 1191 1169 1191 0.97

12 16 3.2 2.3e+02 2.1 4.1 1 23 1197 1220 1197 1220 0.95

13 16 0.0028 0.2 11.7 2.2 1 23 1257 1281 1257 1281 0.97

14 16 0.53 38 4.5 7.8 1 23 1367 1390 1367 1390 0.98

15 16 0.014 1 9.5 0.3 2 23 1446 1467 1445 1467 0.92

16 16 0.0082 0.59 10.2 6.0 1 23 1473 1495 1473 1495 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	79	3.5	0.7	1	23	42	64	42	64	0.93
2	16	0.00034	0.024	14.6	0.3	1	23	78	100	78	100	0.97
3	16	1.4e-06	0.0001	22.0	0.8	1	23	106	129	106	129	0.97
4	16	0.059	4.2	7.5	0.1	1	23	225	249	225	249	0.93
5	16	0.77	55	4.0	1.7	2	23	255	277	255	277	0.91
6	16	3.1	2.2e+02	2.1	1.9	1	20	333	352	333	354	0.85
7	16	0.13	9.4	6.4	0.1	1	23	384	406	384	406	0.96
8	16	1.9e-05	0.0014	18.5	0.3	1	23	415	437	415	437	0.98
9	16	0.00085	0.061	13.3	2.8	1	23	443	466	443	466	0.97
10	16	0.0009	0.065	13.2	2.7	1	23	867	890	867	890	0.96
11	16	0.00045	0.032	14.2	0.1	3	23	1171	1191	1169	1191	0.97
12	16	3.2	2.3e+02	2.1	4.1	1	23	1197	1220	1197	1220	0.95
13	16	0.0028	0.2	11.7	2.2	1	23	1257	1281	1257	1281	0.97
14	16	0.53	38	4.5	7.8	1	23	1367	1390	1367	1390	0.98
15	16	0.014	1	9.5	0.3	2	23	1446	1467	1445	1467	0.92
16	16	0.0082	0.59	10.2	6.0	1	23	1473	1495	1473	1495	0.98

Sequence Information

Coding Sequence: ATGGTATTTAAACCTCCCCACCAATTTCAATTCGATAGTCAAAGATCGGCCGATCCAAAGCTACCGGGTATCGAGCATTTCAAGCACGAGCGCAGACCGCAGGTTGATTTACCCGAAAGCGCGCATCCTTGTCCAGCTTGTCCGACCATACTTTTGACAACCCACGATTTAACAAATCACCTACGGGAACATAATTCACCAAGGAGCACAGAATACGGCGGCGAGGAAGACTACTGCTGTGCTATATGTCAAAAAGTATTGAGTTCGGCAAGTTCCTTGGACCGCCATGTTCTCGTACATTCGCGCGAACGACCTTTCAAGTGTAAATATTGTGACATAGCTTTCACAACTAATGGTAATATGAATAGACATGTTAAAAGTGCCCACCGCGGTGAAAGATCACCACCACAGAGTTATACCGAATCGGAAAGTACTAGTAACGACTCGGAAAACTCATCTAGAAGACAGCACATAGAAGAGCATAACAACAACGAGATATCGAAACAAACTTCGCCAAATTTTATGATAAGAGAAAGATTGGCGAAGAATTTAACGGCGAAAAGAAAGTCACCATCTTTTACCAGAGAAGATGATAGCCCACGTAAACACaagatattgttaaataattccaGAACCGAGATCAAACGTACGCCTGTACAGGCACAAAATTCATACAACTGTCCAGTTTGTAATCGGCAAGATTTTGCTACGAGCGGTCTCTTGGAAACACATTTGGAACAAAATCATCCAGAATTCACGGCAAGGTGCGAACCCtgtaatttatcttttaaaaatcatcgGGTATTGAATCTACACCGTTATATGATTCATTTTTCTGACTATCCCGTTGGTATCCCTACGAGAAATTTACGTAATTCCGTAGTAGGATTCGACGATTTAACTTTTGTTGACTTTACCTCGGCTAAATTCCCAACTATTGCTAGGGTGATGTGCGAGCAAGCGATGCATCGGCCAGCATCCGGAGAAGGTACCAACTTTCAATGCGCCAAGTGTTCAAGGGCATTTCCTTGTTTCAAGTCTATGAAAGAACACCAAAATGAATGTGGAACAATGTCATCGGAATATCACGAAGAGGAAGCTCAGGATTTATTCGCTGCCGAATTCAGGAAGATGAAGTTGAAAGGAGAATTCCCATGCCGATTGTGTACAGCCATATTTCCCAATTTGAGAGCTTTGAAAGGACATAATCGCGCTCATATGGGCGTTGCGCCTGGAGTACCCTATCCATGCAATATGTGTCCTTATACGAGTACGGACAAGGCCACCCTCGTAAGGCATCTTAGATCTCACAACGGTGATCGGCCGTATGAGTGTTCGCTTTGCAATTATGCTTTTACCACAAAAGCAAACTGTGAGAGGCACGTTAGAAATCGTCATGGTAAATTAACCAGGGAAGACATTAAAAGTGTCCTGATATATCACCCGAATGAGGATTCGACGAATGAGAATATCGGTAGAAGTTCGCCAAGAGTGACAAAGGACGAACCAAGAAAAAGTTTGATATATCCGAATGACCGTGAAGATTCCcatcagcaacaacaacagcagcagcaacgtTATCTGTCGATGCCGATGGACTCGAAAAGTGATATTAGAGTGATAGACGAGGCAAAACTATCTAGCCCAGGATTGGCCTCGTCTCTTCggaatattatcgttaatcaTTGCGAAACAAGCGATACTTATTCGAGATCGAGCATACCATCGGCTGGGCTTATTCCAAGGAATATAGATGAGGTCACTACATCTCAAGATCAGAGTGGAAGGGCTGAGGATGATCTTGAATCAAGGTCATCTAACGAAAGCGTGTCTCTAGTCAATGATACTGAAATAGATATGCACCAAAGAATTCAAGCTAGTCCGATTAACTTGAAGAAAACGTCTAACGTACCTAACGCCGTAAATTCGAACCAGGACGGACCGTTGGACCTTAGCATGGACGTTCTAGATTTGAGTAAAAAAGCCAAGGAGAAAAACGGTGCTGGCTCTTCTAGATCGAACGAGCATTATACTGGCAATGATCGAAGAGAATTTTACGATTCAACGAGCCAATTGTTCCTAACACAGGCTCTTTTACAAGCAAGCCAGGGAACTTCGCCGGGAACTTCACCTGGTACTTCACAAGGAACTTCACAGGCAACTTCCTTACAGAATTTCTATGCCAATGCCCAATTGATATATCGCAATTTAGGATCACTTTCGGCAGGAGTAAATGCTGGAATTTTATCTCCTTATATGTTCAATCCGCACCTATTTGGACAAGACCTTAACATCAGGGACAGAATTCAAAAGGAATTCGCCCGTGGCTTACAATTGACCAGTGGTGGTACATTGGTCGATTCGTCTCATGGAAATACAGGTTTTGCCGGTTTTCCTCAATCCAACGATGGCTCGTCTCAATCTGTTAACGAGCAAAATGATTATACCAAATTGTTGGCCTCCAAAATgaccaataaaaatttatcgccACGCGAGAAGCCGGATAATTCACCTTCGTCGAATTCGGTTAAAATGGTCATAAAGAATGGAGTTCTAATGCCGAAACAAAAGCAACGAAGATATCGTACAGAAAGACCGTTCTCTTGCGGACATTGCTCGGCTAAATTCACCTTACGTAGCAACATGGAGCGACATATAAAACAGCAACATCCTGAATTTTGGAGTCAACGACCTCGAGGTGGTCATTCGACGAGAGGTAGACCACCTGCGAACCATCCTaccttaattaaaaattctggACAGTCAAATTCACAAGCATCGCAATCCTACTCCAATATACTACCCAAAACGGAATCATCGTCGGCGATAGAATCTGGTAGACATTCGATTTCCGATCAAGTTAAATATGCAATTTTGGCGCAACAATTGAAGGCAAACAAAATGGACGACAACGACACCGACGAAGAATTGATCATAGACGAGGATCCTACGGATAAAGAGATACAAGAATCTCAAGAACAAGGAGAACGTTCTACGAGTTTGTTGAGAGGACAATTGGAAGGTAATGAGTCTAACAAAGACGTCGGAGTTAAGGAGGAAATTTTAGAAAGAGACTCATCCGACGTATTTCATAATGAACAGaccgaagaaaataatgataccaATGAAAATGGCCGAACATCTAGAAACGAAGATACCCTTGAAGTTAAAACAGAGGATACATCCGGAGATAATAATTCAAGGCACACCTTTAAAATGGACATCTGCACGGATACCGTACAAAATAAACAGGAAGATAATAACGCTGATCTCGCTAGCGTTTCTGAATTATTGGACAATGCCTCTCAACAATATCAACACTTTCAACCACAATATCTGAGCGATGAGGAAGGTTTGGTCGCATCTACGAGCGACTTTAACAATTCTGGAAGCGAGGACAAATCGGACTCGGTGAATTCCGGTAATTCGAATAATGCCTcggcgaagaagaaaaaaaagaaaaaaaagaagaagaaatctgCTTACTCAATGGCACCTAACAGAGTTATATGTCCATATTGCGAACGGCCATTCCCATGGACTTCGTCCCTTAGACGACATATTCTTACGCACACGGGCCAAAAGCCCTatcaatgtatatattgttCACTTTTGTTCACCACCAAATCAAATTGCGATCGGCACCTTTTGAGAAAGCACAAAACAAATCCTAACAAAATACGACGCGTTAGAAATTCATCATCGCCGGACAGTCAGGCAATAAATACGAACAATACGTTCTCAATGAGAAATGTACCAGAGAGACCatataaatgtaatcaatgtCCGAGTTCGACCTTTTCGACGTTAGGGAATTTAAAGAAACATCGTTCGACAAAACACTCGCGCAAAACCAAATCAAGATCTGTATCGCCGTCGAGCGAACCACAAAATAGTCCTTTACAAtcaacaaaacaaaacgatcCTAGCGATTACGAGAGCCAATCGTCCAGTATATCAGAAAATACGGAACAACAGCAGGCGGTATCACCGGTAGAAACGCAAAAACCAAATTCCAATATATCACCGACTAACAATGAATTATCAAGATCACGAAGAACATCCCCTAGATCCTCGCCCGGTCCTAACGACGTACCATTCAAATGTCATCTATGTGATTGCGGATTCGCCGATCGTCACGATTGTTTGGAACATATTAAAACGAATCATAAGAAATCGTACGAAATGTTAGTTGCTAAAGGTGCAATGGATATGGATATCGATGGTTTGGAAGATCAGCCGGTACCACCGCCGCCTCCGCCACCGCCGCAGCAACATCTTAGCGatggggaagaaagaaaaggccGATTCCCAGATTACAGTAATAGAAAAGTGGTCTGTGCCTTTTGCATAAGAAGATTTTGGTCGGCCGAGGATCTCCGTCGTCACATGAGAACACACACTGGTGAAAGACCATTCTCTTGTGATATTTGCTTTCGACGATTCACATTGAAACACAGCATGCTACGTCATCGTAAAAAACACGAATCGGTCGACTCTACAATGTACGTTGGTACAAGCGGCGACGAAGAAAATTCACCTACTCAACCACCAACGATAACACCACGTACCCAACAACAACCACCGGTATTAATGGCAACAAATATCAACAATTCTAGGATACAAGATAGAATCATGTCGTCGGTAGCAACTGGCGATGCTGCTCCCGGTGGTTTCATGAGATTTAATACCTTCGAAAAATTAACTACGTTTACCGGCAAATTGACCACCAATACACAACATAATGTCAATTCTGAATTATCCGAAAATACCGACAACGATTTGATCTCTAATCTTTTGGGCATACGCGATAAAAGTTTCATCGATAAGGTTCTACAAGCATCACCGGACGATGCCGCTAAATTATTAGGCGTACAACGTAGCCACGAATGA
Protein Sequence: MVFKPPHQFQFDSQRSADPKLPGIEHFKHERRPQVDLPESAHPCPACPTILLTTHDLTNHLREHNSPRSTEYGGEEDYCCAICQKVLSSASSLDRHVLVHSRERPFKCKYCDIAFTTNGNMNRHVKSAHRGERSPPQSYTESESTSNDSENSSRRQHIEEHNNNEISKQTSPNFMIRERLAKNLTAKRKSPSFTREDDSPRKHKILLNNSRTEIKRTPVQAQNSYNCPVCNRQDFATSGLLETHLEQNHPEFTARCEPCNLSFKNHRVLNLHRYMIHFSDYPVGIPTRNLRNSVVGFDDLTFVDFTSAKFPTIARVMCEQAMHRPASGEGTNFQCAKCSRAFPCFKSMKEHQNECGTMSSEYHEEEAQDLFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVAPGVPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENIGRSSPRVTKDEPRKSLIYPNDREDSHQQQQQQQQRYLSMPMDSKSDIRVIDEAKLSSPGLASSLRNIIVNHCETSDTYSRSSIPSAGLIPRNIDEVTTSQDQSGRAEDDLESRSSNESVSLVNDTEIDMHQRIQASPINLKKTSNVPNAVNSNQDGPLDLSMDVLDLSKKAKEKNGAGSSRSNEHYTGNDRREFYDSTSQLFLTQALLQASQGTSPGTSPGTSQGTSQATSLQNFYANAQLIYRNLGSLSAGVNAGILSPYMFNPHLFGQDLNIRDRIQKEFARGLQLTSGGTLVDSSHGNTGFAGFPQSNDGSSQSVNEQNDYTKLLASKMTNKNLSPREKPDNSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCGHCSAKFTLRSNMERHIKQQHPEFWSQRPRGGHSTRGRPPANHPTLIKNSGQSNSQASQSYSNILPKTESSSAIESGRHSISDQVKYAILAQQLKANKMDDNDTDEELIIDEDPTDKEIQESQEQGERSTSLLRGQLEGNESNKDVGVKEEILERDSSDVFHNEQTEENNDTNENGRTSRNEDTLEVKTEDTSGDNNSRHTFKMDICTDTVQNKQEDNNADLASVSELLDNASQQYQHFQPQYLSDEEGLVASTSDFNNSGSEDKSDSVNSGNSNNASAKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIYCSLLFTTKSNCDRHLLRKHKTNPNKIRRVRNSSSPDSQAINTNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSRKTKSRSVSPSSEPQNSPLQSTKQNDPSDYESQSSSISENTEQQQAVSPVETQKPNSNISPTNNELSRSRRTSPRSSPGPNDVPFKCHLCDCGFADRHDCLEHIKTNHKKSYEMLVAKGAMDMDIDGLEDQPVPPPPPPPPQQHLSDGEERKGRFPDYSNRKVVCAFCIRRFWSAEDLRRHMRTHTGERPFSCDICFRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENSPTQPPTITPRTQQQPPVLMATNINNSRIQDRIMSSVATGDAAPGGFMRFNTFEKLTTFTGKLTTNTQHNVNSELSENTDNDLISNLLGIRDKSFIDKVLQASPDDAAKLLGVQRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512393;
90% Identity: iTF_01512393; iTF_01513699; iTF_01515035; iTF_01514371;
80% Identity: -