Basic Information

Insect: Vespula vulgaris
Gene Symbol: RREB1
Assembly: GCA_905475345.1
Location: FR997668.1:17904695-17919646[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00039 0.025 14.5 0.3 1 23 75 97 75 97 0.97

2 15 1.6e-06 0.0001 22.0 0.8 1 23 103 126 103 126 0.97

3 15 0.089 5.6 7.1 0.1 1 23 222 246 222 246 0.92

4 15 0.89 56 3.9 1.7 2 23 252 274 252 274 0.91

5 15 3.1 2e+02 2.2 1.7 1 20 330 349 330 351 0.85

6 15 0.15 9.5 6.4 0.1 1 23 466 488 466 488 0.96

7 15 2.2e-05 0.0014 18.4 0.3 1 23 497 519 497 519 0.98

8 15 0.00098 0.062 13.2 2.8 1 23 525 548 525 548 0.97

9 15 0.001 0.066 13.2 2.7 1 23 945 968 945 968 0.96

10 15 0.00052 0.033 14.1 0.1 3 23 1249 1269 1247 1269 0.97

11 15 3.7 2.3e+02 2.0 4.1 1 23 1275 1298 1275 1298 0.95

12 15 0.0033 0.21 11.6 2.2 1 23 1335 1359 1335 1359 0.97

13 15 0.62 39 4.4 7.8 1 23 1444 1467 1444 1467 0.98

14 15 0.016 1 9.4 0.3 2 23 1522 1543 1521 1543 0.92

15 15 0.0095 0.6 10.1 6.0 1 23 1549 1571 1549 1571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00039	0.025	14.5	0.3	1	23	75	97	75	97	0.97
2	15	1.6e-06	0.0001	22.0	0.8	1	23	103	126	103	126	0.97
3	15	0.089	5.6	7.1	0.1	1	23	222	246	222	246	0.92
4	15	0.89	56	3.9	1.7	2	23	252	274	252	274	0.91
5	15	3.1	2e+02	2.2	1.7	1	20	330	349	330	351	0.85
6	15	0.15	9.5	6.4	0.1	1	23	466	488	466	488	0.96
7	15	2.2e-05	0.0014	18.4	0.3	1	23	497	519	497	519	0.98
8	15	0.00098	0.062	13.2	2.8	1	23	525	548	525	548	0.97
9	15	0.001	0.066	13.2	2.7	1	23	945	968	945	968	0.96
10	15	0.00052	0.033	14.1	0.1	3	23	1249	1269	1247	1269	0.97
11	15	3.7	2.3e+02	2.0	4.1	1	23	1275	1298	1275	1298	0.95
12	15	0.0033	0.21	11.6	2.2	1	23	1335	1359	1335	1359	0.97
13	15	0.62	39	4.4	7.8	1	23	1444	1467	1444	1467	0.98
14	15	0.016	1	9.4	0.3	2	23	1522	1543	1521	1543	0.92
15	15	0.0095	0.6	10.1	6.0	1	23	1549	1571	1549	1571	0.98

Sequence Information

Coding Sequence: ATGGATTATTCGAAAAAAGTGACCATAAAGAACGAACCGGAACAGGAACAAGAACAGGAACAAGAACAAGAACAAGAACAGGAACAGACTGAGACACAGGTGGATACAGCAGCATCTCCGTCGTCCACTTGTCCGACCATACTTTTGACAACTCACGATTTAACGAATCATCTACGAGAACATAATTCACCTAGGAGCACGGAATACGGCGGTGAGGAAGATTACTGCTGTGCTATATGTCAAAAAGTATTGAGTTCAGCAAGTTCCTTGGATCGCCATGTTCTTGTACATTCGCGCGAACGACCTTTCAAGTGCAAATATTGTGATATAGCTTTCACAACGAATGGTAATATGAACAGACATGTTAAAAGTGCTCACCGCGGTGAAAGATCACCACCACAGAGTTATACCGAATCGGAAAGTACTAGTAACGACTCCGAAAACTCATCCAGAAGACAACACATAGAAGAACACAACAACAACGAGATATCGAAACAAACTTCGCCAAATTTTATGATCAGAGAAAGATTAGCGAAGAATTTAACGGCCAAACGAAAGTCGCCATCTTTTACCAGAGAAGATGAAAGCCCACGTAAACACAAGATATTGTTGAACAATTCGAGGACCGAGATCAAACGTACCCCTGTACAAACACAAAATTCTTTCAACTGTCCGGTTTGTAATCGGCAAGATTTTGCTACGAGCGGCCTCTTGGAAACGCATTTGGAACAAAATCATCCAGAATTCACGGCAAGGTGCGAACCCTGTAATCTATCTTTTAAAAATCATCGGGTTTTGAATCTACACCGTTATATGATACACTTTTCTGACTATCCCGTTGGTATCCCTACGAGAAATTTACGTAATTCCGTAGTAGGATTCGACGATTTAACTTTTGTTGACTTTACCTCGGCTAAATTCCCAACTATTGCTAGGGTGATGTGCGAGCAAGCGATGCATCGGCCAGCATCCGGAGAAGGTACCAACTTTCAATGCGCCAAGTGTTCAAGGGCATTTCCTTGTTTCAAGTCTATGAAAGAACACCAAAATGAATGTGGTAAGTGTAGGTCAAGTTTGCAATGTAGACCGATAGATGTTGGGGAATCACAGAGAGACGATTTTTTTGCGGGCCTCGAATTACACAATAAAGCTGCTTTGACAGAGGCTAAAGACGGAAAGGATTTAGCGGATATAGAAAGCATTTTGTCCGTTACGTCGGGCCCGATTTTACAAAACTTTCCCCGCTCGGATGCTAGTACACCCGAGAATAATATGAAATTTAATTCGAGCGTTGGTTCTTCTGGTTCATCAGGAACGATGTCATCGGAATATCACGAGGAAGAAGCTCAGGATTTGTTCGCTGCCGAATTCAGGAAGATGAAGTTGAAAGGAGAATTCCCCTGCCGATTATGCACAGCTATATTCCCTAATTTGAGAGCATTGAAGGGACATAATCGTGCTCACATGGGCGTTGCGCCAGGAGTACCCTATCCTTGCAACATGTGTCCTTATACGAGTACGGACAAGGCCACTCTTGTAAGGCATCTCAGATCTCACAACGGCGATCGGCCGTACGAGTGTTCGCTTTGCAATTACGCTTTTACTACAAAAGCAAACTGCGAGAGGCACGTTAGAAATCGTCATGGTAAATTAACCAGGGAAGACATTAAGAGTGTTCTTATATATCACCCGAACGAGGATTCGACGAATGAGAACATCGGTAGAAGTTCGCCAAGAGTGACAAAGGACGAACCAAGAAAAAGTTTGATATATCCGAACGACCGTGAGGACTCTCATCAGCAACAACAACGTTATCTGTCGATGCCGGTGGACTCGAAAAGTGATATTAGAGTGATAGACGAGGCAAAACTACCTAGCCCAGGATTGGCCTCGTCCCTTCGTAGTATTATCGTGAATCATTGCGAAACCAGCGATACTTACTCGAGATCGAACATACCATCGTCCGGGCTTATTCCGAGGAATATAGAAGAGGCCACTACATCTCAAGATCAAAGTGGAAGGGCTGAGGATGATCTTGAATCAAGGTCATCTAACGAAAGCGTGTCTCTAGTCAATGATACCGAATCAGATATGCACCAAAGAATTCAAGCTAGTCCGATTAACTTGAAGAAAACGTCTAACGTACCTAACGCCGGAAATTCGAACCAGGATGGACCCTTGGACCTCAGCATGGACGTTCTAGATTTGAGTAAAAAGGCCAAGGAGAGAAACGGCGCTGGCTCCTCTAGATCGAACGAACATTATCCCGGCAATGACCGAAGAGAATTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAAGGAACTTCGCCAGGAACTTCGCCTGGAACTTCGCAAGGAACCTCGCAGGCAACCTCCCTACAGAATTTCTACGCTAATGCCCAATTGATCTACCGTAATTTAGGATCACTTTCGGCAGGAGTAAATGCTGGAATTCTGTCTCCGTATATGTTCAACCCGCACCTGTTCGGACAAGATCTTAACATCAGAGATAGAATTCAAAAGGAGTTCGCTCGGGGCCTACAACTGACCAGCGGTGGTACGTTGGTCGATCCATCTCACGGAAATACAAGTTTCGCCAGTTTTCCGCAATCAAACGAGGGCTCGTCTCAATCTGTAAACGAGCAAAACGATTATACGAAATTGCTGGCTTCTAAAATGACCAATAAGAATTTATCGCCACGCGAAAAGCCAGACAATTCGCCTTCCTCGAATTCGGTTAAAATGGTCATAAAAAATGGTGTTCTAATGCCAAAACAAAAACAACGAAGATATCGTACGGAAAGACCGTTCTCTTGCGGACATTGCTCGGCCAAGTTCACCCTGCGTAGCAACATGGAGAGACATATAAAACAGCAACATCCTGAATTTTGGAGTCAACGACCTCGAGGTGGTCATTCAACGAGAGGCAGACCACCGGCGAACCATCCGACTTTAATTAAAAATTCTGGACAGTCAAATTCGCAGCCTTCGCAGTCCTACTCCAGCATTCTACCCAAAACCGAGTCGTCATCGGCGATAGAATCTGGCAGACATTCGATTTCCGACCAAGTTAAATACGCGATATTGGCACAACAATTGAAGGCCAACAAAATGGACGACAACGACACCGACGAAGAACTCATCATCGACGAGGATCCTACCGATAAAGAGATGCAAGAATCTCAAGAACAAGGAGAACGTTCTACGAGTTTGTTGAGAGGACAATTGGAAGGAAACGAGACCAACAGAGACGTTTCGGTTAAGGACGAAATCTCAGAGAGAGACTCGTCCGACGTATTTCACAACGAACAGGCCGAGGAACGTAACGATACCAATGAGAACGGCCGGACTTCTAGAAACGAACATATCCCTGAAGTTAAAACTGAAGATCCATCGGGAGATAATAATTCAAGACACACCTTCAAAATGGATATCTGCAACGATACCGTTCAAGATAAACAGGAAGATAATAACGCTGATCTCGCTAGCGTTTCGGAATTATTGGACAATGCTTCTCATCAATATCAACACTTTCAACCTCAATATCTGAGCGACGAGGAAGGTTTGGTCGCATCGACGAGCGACTTCAACAATTCTGGAAGCGAGGACAAATCTGACTCGGTCAATTCCGCTAATTCGAATAACGCCTCGTCGAAAAAGAAAAAGAAGAAAAAAAAGAAGAAGAAATCTGCTTACTCGATGGCACCTAACAGAGTGATATGTCCCTATTGCGAACGGCCATTTCCATGGACTTCGTCCCTTAGACGACATATTCTTACGCACACGGGTCAAAAGCCCTATCAATGTATATACTGTTCGCTTTTGTTCACGACCAAATCGAATTGCGATCGGCACCTTTTGAGAAAGCACAAAACAAATCCGAACAAAATACGACGCGTTAGAAATTCATCTTCGCCGGATAGTCAGGTTGTCAATACGAACAATACGTTCTCGATGAGAAACGTACCGGAGAGGCCGTACAAATGTAATCAGTGTCCGAGTTCGACCTTTTCGACGTTAGGTAATTTAAAGAAACATCGTTCGACCAAACACTCGCGCAAAAACAAATCGAGATCCGTATCGCCCTCGAGCGAACCACAAAACAGTCCTTTGCAACCGTCGAAACAAAACGATCCTAGCGATTACGAGAGCCAATCGTCTAGCATTTCTGAAAATACCGAACAACAACAGGTGTCGCCGGTTGAAACGCAAAAACAAAATTCGAATACGTCACCGACTAACAACGAATTATCAAGATCACGAAGAACTTCACCTAGATCCTCGCCCGGTCCTAACGACGTTCCATTCAAATGTCATCTATGTGACTGCGGATTCGCCGATCGTCACGATTGTTTGGAACATATCAAAACGAATCATAAAAAATCGTACGAGATGTTAGTTGCTAAGGGTGCTATGGATATGGATATCGACGGTTTGGAAGATCAACCAGCACCACCACCACCGCCACCGCCGCAGCAACATCTTAGCGATGGGGAGGAAAGAAAAGGCCGATTCCCAGATTACAGTAATAGAAAAGTGGTCTGTGCCTTTTGCATAAGAAGATTCTGGTCGGCCGAGGATCTCCGTCGTCACATGAGAACTCACACGGGTGAAAGACCATTCTCCTGTGACATATGCTTTCGACGATTCACTTTGAAACACAGCATGCTACGTCATCGTAAAAAGCACGAATCGGTTGACTCTACCATGTACGTTGGTACCAGCGGCGACGAAGAAAATTCACCGACTCAGCCACCAACGATAACACCGCGTACCCAACAACAACCACCCGTTTTAATGGCAACAAATATCAACAATTCGAGGATCCAAGATAGAATTACGTCGTCGGTAGCAACCGGTGATGCTCCTGGTGGTTTCATGAGATTTAATACCTTCGAAAAATTAACTACATTTACCGGCAAATTGACCACCAATACACAGCATAATGTCAATTCAGAATTATCCGAAAATACCGACAACGATTTGATCTCTAATCTTTTGGGCATACGCGATAAAAGTTTCATCGATAAGGTTCTCCAAGCATCACCGGACGATGCCGCTAAATTATTAGGCGTACAACGTAGTCACGAGTGA
Protein Sequence: MDYSKKVTIKNEPEQEQEQEQEQEQEQEQTETQVDTAASPSSTCPTILLTTHDLTNHLREHNSPRSTEYGGEEDYCCAICQKVLSSASSLDRHVLVHSRERPFKCKYCDIAFTTNGNMNRHVKSAHRGERSPPQSYTESESTSNDSENSSRRQHIEEHNNNEISKQTSPNFMIRERLAKNLTAKRKSPSFTREDESPRKHKILLNNSRTEIKRTPVQTQNSFNCPVCNRQDFATSGLLETHLEQNHPEFTARCEPCNLSFKNHRVLNLHRYMIHFSDYPVGIPTRNLRNSVVGFDDLTFVDFTSAKFPTIARVMCEQAMHRPASGEGTNFQCAKCSRAFPCFKSMKEHQNECGKCRSSLQCRPIDVGESQRDDFFAGLELHNKAALTEAKDGKDLADIESILSVTSGPILQNFPRSDASTPENNMKFNSSVGSSGSSGTMSSEYHEEEAQDLFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVAPGVPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENIGRSSPRVTKDEPRKSLIYPNDREDSHQQQQRYLSMPVDSKSDIRVIDEAKLPSPGLASSLRSIIVNHCETSDTYSRSNIPSSGLIPRNIEEATTSQDQSGRAEDDLESRSSNESVSLVNDTESDMHQRIQASPINLKKTSNVPNAGNSNQDGPLDLSMDVLDLSKKAKERNGAGSSRSNEHYPGNDRREFYXXXXXXXXXXXXXXXSQGTSPGTSPGTSQGTSQATSLQNFYANAQLIYRNLGSLSAGVNAGILSPYMFNPHLFGQDLNIRDRIQKEFARGLQLTSGGTLVDPSHGNTSFASFPQSNEGSSQSVNEQNDYTKLLASKMTNKNLSPREKPDNSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCGHCSAKFTLRSNMERHIKQQHPEFWSQRPRGGHSTRGRPPANHPTLIKNSGQSNSQPSQSYSSILPKTESSSAIESGRHSISDQVKYAILAQQLKANKMDDNDTDEELIIDEDPTDKEMQESQEQGERSTSLLRGQLEGNETNRDVSVKDEISERDSSDVFHNEQAEERNDTNENGRTSRNEHIPEVKTEDPSGDNNSRHTFKMDICNDTVQDKQEDNNADLASVSELLDNASHQYQHFQPQYLSDEEGLVASTSDFNNSGSEDKSDSVNSANSNNASSKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIYCSLLFTTKSNCDRHLLRKHKTNPNKIRRVRNSSSPDSQVVNTNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSRKNKSRSVSPSSEPQNSPLQPSKQNDPSDYESQSSSISENTEQQQVSPVETQKQNSNTSPTNNELSRSRRTSPRSSPGPNDVPFKCHLCDCGFADRHDCLEHIKTNHKKSYEMLVAKGAMDMDIDGLEDQPAPPPPPPPQQHLSDGEERKGRFPDYSNRKVVCAFCIRRFWSAEDLRRHMRTHTGERPFSCDICFRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENSPTQPPTITPRTQQQPPVLMATNINNSRIQDRITSSVATGDAPGGFMRFNTFEKLTTFTGKLTTNTQHNVNSELSENTDNDLISNLLGIRDKSFIDKVLQASPDDAAKLLGVQRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512393;
90% Identity: iTF_01513024;
80% Identity: -