Basic Information

Insect: Vespula pensylvanica
Gene Symbol: RREB1
Assembly: GCA_014466175.1
Location: CM025336.1:2156129-2171441[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0004 0.025 14.5 0.3 1 23 49 71 49 71 0.97

2 15 1.7e-06 0.0001 22.0 0.8 1 23 77 100 77 100 0.97

3 15 0.091 5.6 7.1 0.1 1 23 196 220 196 220 0.92

4 15 0.92 56 4.0 1.7 2 23 226 248 226 248 0.91

5 15 3.3 2e+02 2.2 1.8 1 20 304 323 304 325 0.85

6 15 0.15 9.4 6.4 0.1 1 23 440 462 440 462 0.96

7 15 2.3e-05 0.0014 18.4 0.3 1 23 471 493 471 493 0.98

8 15 0.001 0.061 13.3 2.8 1 23 499 522 499 522 0.97

9 15 0.0011 0.066 13.2 2.7 1 23 919 942 919 942 0.96

10 15 0.00054 0.033 14.1 0.1 3 23 1224 1244 1222 1244 0.97

11 15 3.8 2.3e+02 2.0 4.1 1 23 1250 1273 1250 1273 0.95

12 15 0.0034 0.2 11.6 2.2 1 23 1310 1334 1310 1334 0.97

13 15 0.64 39 4.5 7.8 1 23 1420 1443 1420 1443 0.98

14 15 0.017 1 9.4 0.3 2 23 1498 1519 1497 1519 0.92

15 15 0.0098 0.6 10.2 6.0 1 23 1525 1547 1525 1547 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0004	0.025	14.5	0.3	1	23	49	71	49	71	0.97
2	15	1.7e-06	0.0001	22.0	0.8	1	23	77	100	77	100	0.97
3	15	0.091	5.6	7.1	0.1	1	23	196	220	196	220	0.92
4	15	0.92	56	4.0	1.7	2	23	226	248	226	248	0.91
5	15	3.3	2e+02	2.2	1.8	1	20	304	323	304	325	0.85
6	15	0.15	9.4	6.4	0.1	1	23	440	462	440	462	0.96
7	15	2.3e-05	0.0014	18.4	0.3	1	23	471	493	471	493	0.98
8	15	0.001	0.061	13.3	2.8	1	23	499	522	499	522	0.97
9	15	0.0011	0.066	13.2	2.7	1	23	919	942	919	942	0.96
10	15	0.00054	0.033	14.1	0.1	3	23	1224	1244	1222	1244	0.97
11	15	3.8	2.3e+02	2.0	4.1	1	23	1250	1273	1250	1273	0.95
12	15	0.0034	0.2	11.6	2.2	1	23	1310	1334	1310	1334	0.97
13	15	0.64	39	4.5	7.8	1	23	1420	1443	1420	1443	0.98
14	15	0.017	1	9.4	0.3	2	23	1498	1519	1497	1519	0.92
15	15	0.0098	0.6	10.2	6.0	1	23	1525	1547	1525	1547	0.98

Sequence Information

Coding Sequence: ATGGATTATTCGAAAAAAGTGACCATAAAGAACGAACCGGAACAGGAACAAGAACAGGAACAAGAACAAGAACAAGAACAGACTGAGACACAGGTGGATACAGCAGCATCTCCGTCGAGCACGGAATACGGCGGTGAGGAAGACTACTGCTGTGCTATATGTCAAAAAGTATTGAGTTCGGCAAGTTCCTTGGATCGCCATGTTCTTGTACATTCGCGCGAACGACCTTTCAAGTGCAAATATTGTGATATAGCTTTCACAACGAATGGTAATATGAACAGACATGTTAAAAGTGCTCACCGCGGTGAAAGATCACCACCACAGAGTTATACCGAATCGGAAAGTACTAGTAACGACTCCGAAAACTCATCTAGAAGACAACACATAGAAGAACACAACAACAACGAGATATCGAAACAAACTTCGCCAAATTTTATGATCAGAGAAAGATTAGCGAAGAATTTAACAGCCAAACGAAAGTCGCCATCTTTTACCAGAGAAGATGAAAGCCCACGTAAACACAAGATATTGTTGAACAATTCGAGGACCGAGATCAAACGTACCCCTGTACAAACACAAAATTCTTTCAACTGTCCGGTTTGTAATCGGCAAGATTTTGCTACGAGCGGCCTCTTGGAAACGCATTTGGAACAAAATCATCCAGAATTCACGGCAAGGTGCGAACCCTGTAATCTATCTTTTAAAAATCATCGGGTTTTGAATCTACACCGTTATATGATACACTTTTCTGACTATCCCGTTGGTATCCCTACGAGAAATTTACGTAATTCCGTAGTAGGATTCGACGATTTAACTTTTGTTGACTTTACCTCGGCTAAATTCCCAACTATTGCTAGGGTGATGTGCGAGCAAGCGATGCATCGGCCAGCATCCGGAGAAGGTACCAACTTTCAATGCGCCAAGTGTTCAAGGGCATTTCCTTGTTTCAAGTCTATGAAAGAACACCAAAATGAATGTGGTAAGTGTAGGTCAAGTTTGCAATGTAGACCGATAGACGTTGGGGAATCACAGAGAGACGATTTTTTTGCGGGCCTCGAATTACACAATAAAGCTGCTTTGACAGAGGCTAAAGACGGAAAGGATTTAGCGGATATAGAAAGCATTTTGTCCGTTACGTCGGGCCCGATTTTACAAAACTTTCCCCGCTCGGATGCTAGTACACCCGAGAATAATATGAAATTTAATTCGAGCGTTGGTTCTTCTGGTTCATCAGGAACGATGTCATCGGAATATCACGAGGAAGAAGCTCAGGATTTATTCGCTGCCGAATTCAGGAAGATGAAGTTGAAAGGAGAATTCCCCTGCCGATTATGCACAGCTATATTCCCTAATTTGAGAGCATTGAAGGGACATAATCGTGCTCACATGGGTGTTGCGCCAGGAGTACCCTATCCTTGCAACATGTGTCCTTATACGAGTACGGACAAGGCCACTCTTGTAAGGCATCTCAGATCTCACAACGGCGATCGGCCGTACGAGTGTTCGCTTTGCAATTACGCTTTTACTACAAAAGCAAACTGCGAGAGGCACGTTAGAAATCGTCATGGTAAATTAACCAGGGAAGACATCAAGAGTGTTCTTATATATCACCCGAACGAGGATTCGACGAATGAGAACATCGGTAGAAGTTCGCCAAGAGTGACAAAGGACGAACCAAGAAAAAGTTTGATATATCCGAACGACCGTGAGGACTCTCATCAGCAACAGCAACGTTATCTCTCGATGCCGGTGGACTCGAAAAGTGATATTAGAGTGATAGACGAGGCAAAACTACCTAGCCCAGGATTGGCCTCGTCCCTTCGTAGTATTATCGTGAATCATTGCGAAACCAGCGATACTTACTCGAGATCGAACATACCATCGTCCGGGCTTATTCCGAGGAATATAGAAGAGGCCACTACATCTCAAGATCAAAGTGGAAGGGCTGAGGATGATCTTGAATCAAGGTCATCTAACGAAAGCGTGTCTCTAGTCAATGATACCGAATCAGATATGCACCAAAGAATTCAAGCTAGTCCGATTAACTTGAAGAAAACGTCTAACGTACCTAACGCCGGAAATTCGAACCAGGATGGCCCCTTGGACCTCAGCATGGACGTTCTAGATTTGAGTAAAAAGGCCAAGGAGAGAAACGGTGCTGGCTCTTCTAGATCGAACGAACATTATCCCGGCAATGACCGAAGAGAATTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAAGGAACTTCGCCGGGAACTTCGCCTGGAACTTCGCAAGGAACCTCGCAGGCAACCTCCCTGCAGAATTTCTACGCTAATGCCCAATTGATCTACCGTAATTTAGGATCACTTTCGGCAGGAGTAAATGCTGGAATTCTATCTCCTTATATGTTCAACCCGCACCTGTTCGGACAAGATCTTAACATCAGAGATAGAATTCAAAAGGAGTTCGCTCGGGGCCTACAATTGACCAGCGGTGGTACGTTGGTCGATCCATCTCACGGAAATACAAGTTTCGCCAGTTTTCCGCAATCTAACGAGGGCTCGTCTCAATCCGTAAACGAGCAAAACGATTATACGAAATTGCTGGCTTCTAAAATGACCAATAAGAATTTATCGCCACGCGAAAAGCCAGACAATTCGCCTTCCTCGAATTCCGTTAAAATGGTCATAAAAAATGGTGTTCTAATGCCAAAACAAAAACAACGAAGATATCGTACGGAAAGACCGTTCTCTTGCGGACATTGCTCGGCCAAGTTCACCCTGCGTAGCAACATGGAGAGACATATAAAACAGCAACATCCTGAATTTTGGAGTCAACGACCTCGAGGTGGTCATTCAACGAGAGGCAGACCACCGGCGAACCATCCGACTTTAATTAAAAATTCTGGACAGTCAAATTCGCAGCCTTCGCAGTCCTACTCCAGCATTCTACCCAAAACCGAGTCGTCATCGGCGATAGAATCTGGCAGACATTCGATTTCCGACCAAGTTAAATACGCGATATTGGCACAACAATTGAAGGCCAACAAAATGGACGACAACGACACCGACGAAGAACTCATCATCGACGAGGATCCTACCGATAAAGAGATGCAAGAATCTCAAGAACAAGGAGAACGTTCTACGAGTTTGTTGAGAGGACAATTGGAAGGAAACGAGTCCAACAGAGACGTTTTGACGGTTAAGAACGAAATCTCAGAAAGAGACTCGACCGACGTATTTCACAACGAACAGGCCGAGGAACGTAACGATACCAATGAGAACGGCCGGACTTCTAGAAACGAACATATCCCTGAAGTTAAAACTGAAGATCCATCCGGAGATAATAATTCAAGACACACCTTCAAAATGGATATCTGTAACGATACCGTTCAAGATAAACAGGAAGATAATAACGCTGATCTCGCTAGCGTTTCGGAATTATTGGACAATGCTTCTCATCAATATCAACACTTTCAACCTCAATATCTGAGCGACGAGGAAGGTTTGGTCGCATCGACGAGCGACTTCAACAATTCTGGAAGCGAGGACAAATCTGACTCGGTCAATTCCGGTAATTCGAATAACGCCTCGTCGAAAAAGAAAAAGAAGAAAAAAAAGAAGAAGAAATCTGCTTACTCGATGGCACCTAACAGAGTGATATGTCCCTATTGCGAACGGCCATTTCCATGGACTTCGTCCCTTAGACGACATATTCTTACGCACACGGGTCAAAAGCCCTATCAATGTATATACTGTTCACTTTTGTTCACGACCAAATCGAATTGCGATCGGCACCTTTTGAGAAAGCACAAAACAAATCCGAACAAAATACGACGCGTTAGAAATTCATCTTCGCCGGATAGTCAGGTTGTCAATACGAACAATACGTTCTCGATGAGAAACGTACCGGAGAGGCCGTACAAATGTAATCAGTGTCCGAGTTCGACCTTTTCGACGTTAGGTAATTTAAAGAAACATCGTTCGACCAAACACTCGCGCAAAAACAAATCGAGATCCGTATCGCCCTCGAGCGAACCACAAAACAGTCCTTTACAACCGTCGAAACAAAACGATCCTAGCGATTACGAGAGCCAATCGTCTAGCATTTCTGAAAATGTTTCTGAACAACAACAAGTGTCGCCGGTTGAAACACAAAAACAAAATTCGAATACATCACCGACTAACAACGAATTATCAAGATCACGAAGAACTTCACCTAGATCCTCGCCCGGTCCTAACGACGTTCCATTCAAATGTCATCTATGTGACTGCGGATTCGCCGATCGTCATGATTGTTTGGAACATATCAAAACGAATCATAAAAAATCGTACGAGATGTTAGTTGCTAAGGGTGCTATGGATATGGATATCGACGGTTTGGAAGATCAACCAGCACCACCACCACCGCCACCGCCGCAGCAACATCTTAGCGATGGAGAGGAAAGAAAAGGCCGATTCCCAGATTACAGTAATAGAAAAGTGGTCTGTGCCTTTTGCATAAGAAGATTCTGGTCGGCCGAGGATCTACGTCGTCACATGAGAACTCACACGGGTGAAAGACCATTCTCCTGTGACATATGCTTTCGACGATTCACTTTGAAACACAGCATGCTACGTCATCGTAAAAAGCACGAATCGGTTGACTCTACCATGTACGTTGGTACCAGCGGCGACGAAGAAAATTCACCGACTCAGCCACCAACGATAACACCGCGTACCCAACAACAACCACCCGTTTTAATGGCAACAAATATCAACAATTCGAGGATCCAAGATAGAATTACGTCGTCGGTAGCAACCGGCGATGCTCCTGGTGGTTTCATGAGATTTAATACCTTCGAAAAATTAACTACATTTACCGGCAAATTGACCACCAATACACAGCATAATGTCAATTCAGAATTATCCGAAAATACCGACAACGATTTGATCTCTAATCTTTTGGGCATACGCGATAAAAGTTTCATCGATAAGGTTCTCCAAGCATCACCGGACGATGCCGCTAAATTATTAGGCGTACAACGTAGTCACGAGTGA
Protein Sequence: MDYSKKVTIKNEPEQEQEQEQEQEQEQTETQVDTAASPSSTEYGGEEDYCCAICQKVLSSASSLDRHVLVHSRERPFKCKYCDIAFTTNGNMNRHVKSAHRGERSPPQSYTESESTSNDSENSSRRQHIEEHNNNEISKQTSPNFMIRERLAKNLTAKRKSPSFTREDESPRKHKILLNNSRTEIKRTPVQTQNSFNCPVCNRQDFATSGLLETHLEQNHPEFTARCEPCNLSFKNHRVLNLHRYMIHFSDYPVGIPTRNLRNSVVGFDDLTFVDFTSAKFPTIARVMCEQAMHRPASGEGTNFQCAKCSRAFPCFKSMKEHQNECGKCRSSLQCRPIDVGESQRDDFFAGLELHNKAALTEAKDGKDLADIESILSVTSGPILQNFPRSDASTPENNMKFNSSVGSSGSSGTMSSEYHEEEAQDLFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVAPGVPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENIGRSSPRVTKDEPRKSLIYPNDREDSHQQQQRYLSMPVDSKSDIRVIDEAKLPSPGLASSLRSIIVNHCETSDTYSRSNIPSSGLIPRNIEEATTSQDQSGRAEDDLESRSSNESVSLVNDTESDMHQRIQASPINLKKTSNVPNAGNSNQDGPLDLSMDVLDLSKKAKERNGAGSSRSNEHYPGNDRREFYXXXXXXXXXXXXXXXSQGTSPGTSPGTSQGTSQATSLQNFYANAQLIYRNLGSLSAGVNAGILSPYMFNPHLFGQDLNIRDRIQKEFARGLQLTSGGTLVDPSHGNTSFASFPQSNEGSSQSVNEQNDYTKLLASKMTNKNLSPREKPDNSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCGHCSAKFTLRSNMERHIKQQHPEFWSQRPRGGHSTRGRPPANHPTLIKNSGQSNSQPSQSYSSILPKTESSSAIESGRHSISDQVKYAILAQQLKANKMDDNDTDEELIIDEDPTDKEMQESQEQGERSTSLLRGQLEGNESNRDVLTVKNEISERDSTDVFHNEQAEERNDTNENGRTSRNEHIPEVKTEDPSGDNNSRHTFKMDICNDTVQDKQEDNNADLASVSELLDNASHQYQHFQPQYLSDEEGLVASTSDFNNSGSEDKSDSVNSGNSNNASSKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCIYCSLLFTTKSNCDRHLLRKHKTNPNKIRRVRNSSSPDSQVVNTNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSRKNKSRSVSPSSEPQNSPLQPSKQNDPSDYESQSSSISENVSEQQQVSPVETQKQNSNTSPTNNELSRSRRTSPRSSPGPNDVPFKCHLCDCGFADRHDCLEHIKTNHKKSYEMLVAKGAMDMDIDGLEDQPAPPPPPPPQQHLSDGEERKGRFPDYSNRKVVCAFCIRRFWSAEDLRRHMRTHTGERPFSCDICFRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENSPTQPPTITPRTQQQPPVLMATNINNSRIQDRITSSVATGDAPGGFMRFNTFEKLTTFTGKLTTNTQHNVNSELSENTDNDLISNLLGIRDKSFIDKVLQASPDDAAKLLGVQRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512393;
90% Identity: iTF_01513024;
80% Identity: -