Basic Information

Insect: Campoplex capitator
Gene Symbol: -
Assembly: GCA_037576405.1
Location: JARBWI010000006.1:11613677-11620724[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.8e-05 0.0098 16.7 1.4 1 23 472 494 472 494 0.96

2 18 1.8e-05 0.002 18.9 1.9 1 20 500 519 500 522 0.94

3 18 2.9e-05 0.0032 18.2 0.7 1 23 528 550 528 550 0.98

4 18 7.1e-05 0.008 17.0 4.4 1 21 556 576 556 578 0.95

5 18 2.2e-05 0.0025 18.6 4.6 1 23 584 606 584 606 0.99

6 18 2.2e-05 0.0025 18.6 5.3 1 23 612 634 612 634 0.97

7 18 8.4e-06 0.00094 19.9 7.1 1 23 640 662 640 662 0.97

8 18 8.2e-08 9.1e-06 26.2 2.7 1 23 668 690 668 690 0.98

9 18 6.1e-05 0.0067 17.2 6.7 1 23 696 718 696 718 0.97

10 18 1.9e-05 0.0021 18.8 5.8 1 23 724 746 724 746 0.98

11 18 5e-07 5.6e-05 23.7 2.9 1 23 752 774 752 774 0.98

12 18 7.4e-06 0.00083 20.1 7.8 1 23 780 802 780 802 0.98

13 18 2.3e-05 0.0026 18.5 9.1 1 23 808 830 808 830 0.98

14 18 3.1e-05 0.0034 18.1 7.5 1 23 836 858 836 858 0.98

15 18 0.00058 0.065 14.1 8.9 1 21 864 884 864 886 0.94

16 18 1.1e-05 0.0013 19.5 0.4 1 23 892 914 892 914 0.98

17 18 0.027 3 8.9 4.5 1 23 924 946 924 946 0.98

18 18 4.3e-07 4.8e-05 23.9 1.3 1 23 952 974 952 974 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.8e-05	0.0098	16.7	1.4	1	23	472	494	472	494	0.96
2	18	1.8e-05	0.002	18.9	1.9	1	20	500	519	500	522	0.94
3	18	2.9e-05	0.0032	18.2	0.7	1	23	528	550	528	550	0.98
4	18	7.1e-05	0.008	17.0	4.4	1	21	556	576	556	578	0.95
5	18	2.2e-05	0.0025	18.6	4.6	1	23	584	606	584	606	0.99
6	18	2.2e-05	0.0025	18.6	5.3	1	23	612	634	612	634	0.97
7	18	8.4e-06	0.00094	19.9	7.1	1	23	640	662	640	662	0.97
8	18	8.2e-08	9.1e-06	26.2	2.7	1	23	668	690	668	690	0.98
9	18	6.1e-05	0.0067	17.2	6.7	1	23	696	718	696	718	0.97
10	18	1.9e-05	0.0021	18.8	5.8	1	23	724	746	724	746	0.98
11	18	5e-07	5.6e-05	23.7	2.9	1	23	752	774	752	774	0.98
12	18	7.4e-06	0.00083	20.1	7.8	1	23	780	802	780	802	0.98
13	18	2.3e-05	0.0026	18.5	9.1	1	23	808	830	808	830	0.98
14	18	3.1e-05	0.0034	18.1	7.5	1	23	836	858	836	858	0.98
15	18	0.00058	0.065	14.1	8.9	1	21	864	884	864	886	0.94
16	18	1.1e-05	0.0013	19.5	0.4	1	23	892	914	892	914	0.98
17	18	0.027	3	8.9	4.5	1	23	924	946	924	946	0.98
18	18	4.3e-07	4.8e-05	23.9	1.3	1	23	952	974	952	974	0.97

Sequence Information

Coding Sequence: ATGAATAACGAACAGCATACTTTGCCGGCCGCCGCACAGGCGCAGCAGGAGAGATGTCGTCCTTGGTATCAGGCAAATGTAGCTAGTAGCACGAGTCAAGGACAATTAGGAAGTACGCAGCGACAAGCTTCTACTTCGGATGTACGAGTAGGTACGGCGGCGGTGGCTCTAGCCTCCTCGGTAGCCAAGTATTGGGTCTTGACGGGTTTGTTTCCCGGGCCGATACCCCAGGTTTCGGTCCATCACGCGCATCAACAAAATTCCACCGGCTCTCAGAGGAGCGTCCAAGTACATTTACAAAATAAGGAAGCCGTCGGAACTGCTACCGGATCTCATGATACAGCTGTCGCCGCGGAAGGTGCGAACCTCGATAGCGCAAACGCCGCAGCTCGTCGGCATCATCAAAACTCGGTGGTTAACGATTCTGttatcaacaacaacaataacaatacCGGCAACATTGTTCATGCCTCGTTGCAATCGAGCACCCAGattgCAGTCTCGCTGCCGGGCCTGAATCTAGACGGGACTCACATACAGGCGAGTCATTTGCAGGCTGCTCACGCACAGATGCAGCAACAAATGCAGTCCCAACAGCAACAGCTGcatcaacagcagcagcagcagcagcagcagcagcagcaacaacaacagcaacaacaacagcaacaacaacagcaacaacaacaacaacaacagcaggcGCATCATCAAATGCAGCAAAGCCATCAGAATCCGCAAAACAATGTAACAAATTCGCAAAATCAGAACGCTCAACGGGACGAAAACAAAGTCAAGGATGAGGGTGGTAGCTGCACCACCGAACGCTGTAGCGATAATCAAGTTCATTGTCAAGTCCAGTGTGATCTTCAGCTTCAACAGCCACAAGATTTGCAACAAAGCATTatgcaacagcagcagcagcagcagcaacaaatTGGCGTTGGCATAAGCGGCAATGCCGGTGGCAACGATAATGGAAGTTCGACGAAACccgagaaagaaaaggaattgCGTCAATTGAACATGGCACAgTTTCAAGTACCGGACTTGAAACCCGGTGGTCACATGATGGACGTAAGAACGGCGGATGGTTCGGTAGTGAAGATAAGCGCCGGAAACGAGCAAGATCTCGCCAAAACTCTTGGTGTCGAAATGGTCCAAAACATGTACAAGGTCAATGTCGAGGATATAAATCAATTGCTCGCTTATCACGAAGTATTTGGAAAACTTCAGAGCGAAATAGCAGCTGGCACGACACTCGTTGGTGGAACCGTACCCACTCAGACCGTTACCACGATACAGAATGGAACACCGATCGTTCAACAAGTCCAGCTCAACAAATTCGACATAAAGACTAGCGACGGCGAAGCGACACCCGGACCAAGCGCCTCACCCGTTTCCGTTGGCAGTCACGCTTGCGAAGTTTGCGGCAAAATATTCCAGTTTCGCTATCAGCTTATCGTACACCGTAGATATCATACCGAACGAAAACCCTTCACGTGTCAgGTATGCGGCAAAGCATTCTCGAACGCCAACGATTTGACTCGTCACGGTAAATGTCATTTGGGTGGTTCGATGTTCACGTGCGCCGTATGTTTTCACGTATTTGCGAATGCGCCTTCTCTCGAGCGTCACATGAAACGTCACGCTACCGACAAACCGTACAATTGCACCGTTTGTGGCAAGAGTTTTGCACGGAAGGAGCATCTTGACAACCACACGCGTTGTCATACCGGCGAAACCCCGTACAGgtgTCAATATTGCGCAAAAACTTTCACCCGGAAAGAACATATGGTTAATCACGTGCGCAAACACACCGGTGAAACTCCTCATCGTTGTGACATTTGCAAAAAGAGCTTCACCCGAAAGGAACACTTTATGAATCATGTTATGTGGCACACCGGCGAAACACCTCACCATTGTCAAGTTTGTGGCAAAAAATATACTCGAAAGGAACATCTCGCCAATCATATGCGATCGCACACCAATGATACGCCTTTCCGCTGTGAAATATGTGGCAAATCGTTTACGAGGAAGGAGCACTTCACGAATCACATAATGTGGCACACCGGTGAGACGCCGCATCGCTGCGATTTCTGCTCAAAGACGTTCACTCGGAAGGAACATCTCCTTAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACATCGGTGCCACTTCTGCTCAAAGTCGTTCACGCGAAAGGAACACTTGACGAATCACGTGAGAATCCATACCGGGGAATCCCCCCATAGATGTGAATTCTGTCAGAGGACTTTCACCAGGAAGGAACATCTCAATAATCATCTACGTCAGCATACCGGAGATTCCTCCCACTGTTGTAACGTTTGCAACAAACCATTCACGAGAAAGgaaCATCTTGTTAATCACATGAGATGTCACACGGGTGAACGCCCCTTCGTATGCACGGAATGCGGCAAGAGTTTCCCCCTCAAGGGAAATCTTCTCTTTCATATGCGTTCGCACAACAAGGGCAGCAACGCCGAAAGACCATTCAGGTGTGATCTTTGCCCGAAAGACTTTATGTGCAAGGGCCATCTAGTTTCTCACAGGCGTTCGCATTCGGACGAGAGACCCCACAGTTGTCCCGATTGCGGTaaaacttttgtcgaaaaagGCAACATGTTGCGACATTTGAGAAAACACGCCGCCGAGGGAGCTCCGACACAAGTTACAACCGCTGCATCCGCCATTTCCCAAccaggtggtggtggtggtggtggtggtggtgctgctgctgctggtagTGCTGGTGCTGCTGGTGGTACCGGTGGTGTTCTCCCAATACCAGCGGCCGCTGTACTCGTTGGACATCCACTCGCACCCCCGGCACCACCCCCCGTTGTACCACAACACACGGTCGTTGTTCCAACACCACCGGGAGTTCTCACTTCTTattga
Protein Sequence: MNNEQHTLPAAAQAQQERCRPWYQANVASSTSQGQLGSTQRQASTSDVRVGTAAVALASSVAKYWVLTGLFPGPIPQVSVHHAHQQNSTGSQRSVQVHLQNKEAVGTATGSHDTAVAAEGANLDSANAAARRHHQNSVVNDSVINNNNNNTGNIVHASLQSSTQIAVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAHHQMQQSHQNPQNNVTNSQNQNAQRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSIMQQQQQQQQQIGVGISGNAGGNDNGSSTKPEKEKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTAASAISQPGGGGGGGGGAAAAGSAGAAGGTGGVLPIPAAAVLVGHPLAPPAPPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509042;
90% Identity: iTF_00266637;
80% Identity: -