Vcan018273.1
Basic Information
- Insect
- Venturia canescens
- Gene Symbol
- tfip11_1
- Assembly
- None
- Location
- scaffold:26746-30250[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-100 1.2e-96 323.8 17.1 1 275 413 680 413 680 0.98 2 2 0.0062 68 3.2 0.0 243 273 693 723 685 725 0.87
Sequence Information
- Coding Sequence
- ATGGCTGAAGATGAAATGGAAAGCTTTGAAATCACTGACTACGATTTGGATAATGAATTCAACATCAATCGACCACGACGGAAACTCACGAAACAGCAGCAAATGCTTGGTATATGGGCCGATGACAGCGATGAAGAGCAATCAACTGTTAGACAACCCAAACATTATAACAAAGGGCCCAAAAACTATACCGCTCCTGTCAATTTTGTTGCTGGTGGAATTCATAAGCCAAGTGAGAGCAAGTCTGATAAAAAGAAAGATGATAAGGATGGGAAGGCTGAAGATGATGACGAGGATCAAGAGGACGATGATGATACCCAGAGGCCACGTAGAGGGGACAATGATTATGTGCCCAACAGCTCAGACGATTCTGATAGCGAATCGATAAGTAACGTGAAGGCAAGGCCATCATTTTCAATGAATCCAAACGCGCATGGAGACATAGCAGGATTAAGAAGAAAAGGAGAAAAATTAAATCCAGCACTAATGAAGACTGGAGTGGGCAGTTGGGAAGTCCATACGAAGGGAATAGGAGCCAAGCTCTTGCTTCAGATGGGCTTTGAGCCAGGAAAAGGTTTGGGAAAGAAACTCCAAGGTATAAGCGCACCAGTGGAGGCTCATTTGCGAAGAGGGAGAGGAGCGATCGGGGCTTACGGTCCTGAAAAATTAGCTAAAATTCCTGAGAAGAAGAAAGATGAGGATGTGGAAGAGGCTAAAGAATTCAAAGTCAAATTGTCACAGTGGCGAAAGACCGATGGGGCAATTAATAATGCAAAAAAGAAGATTCGCTATCATTATCGAAGTGTTGATCAGGTTCTGGAGGAGGGGAAAGCATTACCGGACAGAAGGCCCGCAGGAGGTGCGAGCAGTGACATGAGCAGAGTGAAGGTGATAGACATGACTGGACCAGAGCAACGAGTTCTCAGTGGCTACCACGCGATTGCAAGTGGTCAAAAACGTCCCGACGAAAACCTCATTATTACCGATAAGAAAACTTCCGGCTATTTCGAACTACCTGAACTCAAGCACAATCTCAATCTTTTGGTTGATATGTGCGAACAGAATATCATTCAAAATGATAGAAGAACTCGCTGTTTGAGTGACCGTTCGGTTGCTCTCGTAGCCGAGAAAAAGAACATAACAAAAGTGGTTGGCCAGCAGGAACAATTGATCGATACACTTGCAGGAGTTCTCGCGATCATAGAAAAATTAGTTCATCAAAATGACTCGATCGCTTTGAAAGAAACTGCGGAAGCTTTCAAAAAATTACAGGACAAATATTACGAGGAATACAAACTCTACGAGTTAGGTGACCTGGCCAGTAGTTTCGTAGCTCCAAAATTAAAGGACAGTCTTGCCACGTGGAATCCACTTGTTCAGCCTAAACAACCGATCTCTCTGATCAAAGAGTGGAAGGATATTCTTGAGGTTGGAACTGGTACTCTACAGTCGAGGAACATGCAACCGTACGATCAATTGATCTGGAACGCTTGGATGCCATCGATCCGTGGAGCAGTGCAAGAATGGAAGTGTCGACAACCTGAACCAATGATCGAATTGATAGAAGATTGGATGCCACTACTTCCAGCGTGGATTTTAGAAAACATCTTAGACCTGATAGTGCTCCCAAAATTGACGCTCGAAGTCGAAGAGTGGAATCCACTGACCGACACCGTCCCTATTCACACATGGATTCATCCATGGTTGCCAATAATGCGCAATCGTTTGGACACACAAATTTATCCAATAATCCGTCGTAAATTGGGCTCGGCCTTGGGCGGTTGGCATCCGTCTGACAGATCGGCCCGACTCATGCTCCAACCTTGGTCCCAGGTCTTTGCCAAGGGTGACATGGAAGCTTTCCTCGTGAAAAACATTCTTCCCAAGCTACAAATAGCGCTCTCCGAGTTCGTTATCAACCCTCACCAGCAACATTTGGATCAGTGGAACTGGGTCTACGAATGGGCTACTTTACTACCGATACAAATAATGGTTGGATTATTAGACAAATTTTTCTTCCCCAAGTGGCTTCAGGTACTCGCGATGTGGCTCAATCACTCGCCCAATTACGATCAAATTACCAATTGGTATATGGGCTGGAAGGGTATGCTGAATGATAGATTATTGGCTGAACCAATTGTCAAAGACTACTTTAAAAAAGCACTGGATATGATGAATCGAGCTGTGGCGACTCCTCAGGCGCATCAGCCAGGAGCGATGGAGCAAGTTTCGTATCTTACGAGTTTGGAGCGAAATCAGTCGACACCATCGCAAATACCCCCAACGGCGCAACCAAGAATCGAGCGACTCGCTGAGGCTGTGCGTACTGCTTCACAAATACCTCAAGGCTTCAAGGACCTCGTGCAGAAAAAGTGTGAGGAACGAGGCATCCTTTTCATGCCTATTCCTAACAGGTATCGAGAGGCAAAACAAGTGTACAAAGTTGGTAACGTTCAGGCTTTCATCGAAGGAAATGTACTTTTCGTCTGTCACAACGGCTCGAATTGGGTACCAACGAACTTGAACGCTCTGCTTGACATGTCCGAGATGTAA
- Protein Sequence
- MAEDEMESFEITDYDLDNEFNINRPRRKLTKQQQMLGIWADDSDEEQSTVRQPKHYNKGPKNYTAPVNFVAGGIHKPSESKSDKKKDDKDGKAEDDDEDQEDDDDTQRPRRGDNDYVPNSSDDSDSESISNVKARPSFSMNPNAHGDIAGLRRKGEKLNPALMKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIPEKKKDEDVEEAKEFKVKLSQWRKTDGAINNAKKKIRYHYRSVDQVLEEGKALPDRRPAGGASSDMSRVKVIDMTGPEQRVLSGYHAIASGQKRPDENLIITDKKTSGYFELPELKHNLNLLVDMCEQNIIQNDRRTRCLSDRSVALVAEKKNITKVVGQQEQLIDTLAGVLAIIEKLVHQNDSIALKETAEAFKKLQDKYYEEYKLYELGDLASSFVAPKLKDSLATWNPLVQPKQPISLIKEWKDILEVGTGTLQSRNMQPYDQLIWNAWMPSIRGAVQEWKCRQPEPMIELIEDWMPLLPAWILENILDLIVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPIMRNRLDTQIYPIIRRKLGSALGGWHPSDRSARLMLQPWSQVFAKGDMEAFLVKNILPKLQIALSEFVINPHQQHLDQWNWVYEWATLLPIQIMVGLLDKFFFPKWLQVLAMWLNHSPNYDQITNWYMGWKGMLNDRLLAEPIVKDYFKKALDMMNRAVATPQAHQPGAMEQVSYLTSLERNQSTPSQIPPTAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAFIEGNVLFVCHNGSNWVPTNLNALLDMSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057641;
- 90% Identity
- iTF_00263462; iTF_00828774; iTF_01299175; iTF_00439468; iTF_00266451; iTF_00829496; iTF_00262655; iTF_00265690;
- 80% Identity
- -