Rmeg008285.1
Basic Information
- Insect
- Rhimphoctona megacephalus
- Gene Symbol
- tfip11
- Assembly
- GCA_963989365.1
- Location
- OZ022415.1:28657440-28661718[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-99 1.7e-95 320.5 16.2 1 275 416 683 416 683 0.98 2 2 0.0063 99 3.2 0.0 243 273 696 726 688 728 0.87
Sequence Information
- Coding Sequence
- ATGGCTGAAGATGAAATGGAAAGTTTTGAAATTACCGATTACGATTTGGATAATGAATTCAATATTAATCGACCGCGACGAAAACTCACGAAACAGCAACAAATGCTCGGCATATGGGCTGACGACAGTGATGAAGAGCAACCAACCGCTAGACAATCTAAACATTTCAACAAAGGACCAAAAAATTATACAGCACCTGTTAATTTTGTAGCTGGTGGAATTCAACAGTCGGGCAAGCCCAAGCCTGATCGGAAGAAAGATGGTGAAGAGGACGAGGATGAGAAGGAGGAAGAAGACGAAGAGGACCAGGATGAGGATGATGATACCCAAAGGCCTCGCAGAGGTGATGACGACTATGTGCCAAACAGCTCGAGTGATTCTGAAGATGAAGCAATAAGTAATGCGAAAGCAAGGCCATCGTTTTCTACGAACCCAAACGCACATGGAGACATAGCAGGATTGAGAAGAAAGGGCGAAAGGTTAAATCCAGCATTGCTGAAGACTGGGGTGGGTAGTTGGGAAGTCCATACGAAGGGAATAGGAGCAAAGCTCCTGCTTCAGATGGGTTTTGAGCCTGGAAAAGGTTTGGGAAAAAAGCTCCAAGGTATAAGCGCACCGGTGGAGGCTCATTTGCGAAGAGGGAGAGGAGCAATCGGGGCTTATGGCCCAGAAAAATTGGCCAAAATTCCAGAGAAAAAGAAGGATGAGGATGCGGAGGAGGCTAAAGAGTTCAAAGTTAAATTGTCGCAGTGGCGAAAGAGTGATGGGATAAATAGCAATGCAAAAAAGAAGGTTCGCTACCATTATCGAAGTGTCGATCAGGTTTTGGAGGAGGGAAAAACAATGCCGGACAGAAGACCTGCAGGGGGTGCGAGCAGCGACATGAGTAGAGTGAAGGTGATAGATATGACGGGACCGGAGCAACGAGTTCTCAGCGGCTACCATGCGATCGCAAGTGGTCAAAAACGTCCCGATGAAACCCTCATCATAACCGATAAGAAAACTTCCGGCTATTTCGAACTGCCGGAGCTCAGGCACAATCTCAACCTGTTGGTTGACATGTGCGAACAGAATATCATTCAGAATGACAGGAGAACTCGCTGTTTGAGTGACCGTATGGTGGCTCTCGacgcggagaaaaaaaatataacaaaagtgGTTGATCAGCAGGAGCAATTGATCGATACGCTTGCAGGCGTTCTCTCGATAATTGAAAAACTAGTTCATCAAAACGACTCGATTGCCCTGAAGGAAACTGCAGAGGCTTTCAAGAAATTACAGAACAGGTATTACGAGGAGTACAAGCTTTATGAATTGGGTGATTTGGCGAGTAGTTTCGTAGCCCCGAAATTGAAGGACAGCCTTGCCACGTGGAATCCACTTGTTCAGCCTAAACAACCGATCGGACTGATCAAAGAGTGGAAGGATATTCTTGAAGTTGGAACCGGTACCCTACAGTCGAGGAACATGCAACCGTACGATCAATTGGTCTGGAACGCTTGGATGCCCTCAATTCGTGGGGCGGTACAAGAATGGAAGTGTAGACAACCTGATCCAATGATCGAATTGATAGAAGATTGGATGCCACTACTTCCAGCATGGATATTAGAAAACATATTGGACCTGATGGTGCTCCCAAAATTGACGCTCGAGGTTGAAGAATGGAATCCACTGACCGACACTGTCCCCATTCATACATGGATTCACCCTTGGTTGCCAATAATGCGCAATCGCATGGACACACAAATTTATCCAATAATCCGTCGTAAATTGGGCTCGGCTTTGGGCGGTTGGCATCCGTCCGACAGATCGGCTCGGCTTATGCTCCAACCTTGGGCCCAAGTATTTACCAAGGGCGACATGGAAGCTTTCCTCGTGAAAAATATCCTTCCCAAGCTTCAAATAGCACTCTCTGAATTCGTAATTAACCCTCATCAGCAACATTTGGATCAATGGAACTGGGTCTATGAATGGGCTACTTTGCTACCGATACAAATAATGGTTGGATTGTTAgacaaatttttctttcctaagtGGCTTCAGGTACTCGCAATGTGGCTCAATCATTCACCCAATTATGATCAAATTACCAATTGGTATATGGGCTGGAAGGGCATGCTAAATGACAGATTGTTGGCTGAACCAATTGTCAAGGactATTTCAAGAAAGCATTGGACATGATGAATCGAGCTGTGGCGACTCCACAGCCGCATCAACCAGGAGCAATGGAGCAAGTTTCGTATCTTACGAGTTTGGAGCGAACTCAGCCCACGATGTCGCAAATACCGGCAACGGCGCAGCCAAGAATCGAGCGACTTGCTGAGGCTGTGCGTGCCGCGTCGCAAATACCTCAAGGCTTCAAGGACCTCGTACAGAAAAAGTGCGAAGAACGTGGCATCCTCTTTATGCCCATTCCCAATAGATATCGAGAGGCGAAACAAGTATACAAAGTTGGCAACGTTCAGGCTTTCATCGAGGGAAATGTACTCTTCGTGTGTCACAACGGAACGAGTTGGGTACCGACAAACTTGAACGCTCTTCTCGACATGTCCGAGATGTAA
- Protein Sequence
- MAEDEMESFEITDYDLDNEFNINRPRRKLTKQQQMLGIWADDSDEEQPTARQSKHFNKGPKNYTAPVNFVAGGIQQSGKPKPDRKKDGEEDEDEKEEEDEEDQDEDDDTQRPRRGDDDYVPNSSSDSEDEAISNAKARPSFSTNPNAHGDIAGLRRKGERLNPALLKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIPEKKKDEDAEEAKEFKVKLSQWRKSDGINSNAKKKVRYHYRSVDQVLEEGKTMPDRRPAGGASSDMSRVKVIDMTGPEQRVLSGYHAIASGQKRPDETLIITDKKTSGYFELPELRHNLNLLVDMCEQNIIQNDRRTRCLSDRMVALDAEKKNITKVVDQQEQLIDTLAGVLSIIEKLVHQNDSIALKETAEAFKKLQNRYYEEYKLYELGDLASSFVAPKLKDSLATWNPLVQPKQPIGLIKEWKDILEVGTGTLQSRNMQPYDQLVWNAWMPSIRGAVQEWKCRQPDPMIELIEDWMPLLPAWILENILDLMVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPIMRNRMDTQIYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFTKGDMEAFLVKNILPKLQIALSEFVINPHQQHLDQWNWVYEWATLLPIQIMVGLLDKFFFPKWLQVLAMWLNHSPNYDQITNWYMGWKGMLNDRLLAEPIVKDYFKKALDMMNRAVATPQPHQPGAMEQVSYLTSLERTQPTMSQIPATAQPRIERLAEAVRAASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAFIEGNVLFVCHNGTSWVPTNLNALLDMSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057641;
- 90% Identity
- iTF_01508858;
- 80% Identity
- -