Basic Information

Insect: Tyria jacobaeae
Gene Symbol: -
Assembly: GCA_947561695.1
Location: OX387235.1:7729243-7731591[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0028 1.9 9.1 0.6 18 43 9 31 5 32 0.93

2 17 0.00085 0.56 10.8 0.1 18 43 68 90 64 91 0.85

3 17 3.8e-05 0.025 15.1 0.7 17 44 98 122 96 122 0.94

4 17 0.003 2 9.0 2.0 18 43 129 151 127 152 0.90

5 17 1.2e-05 0.0079 16.7 1.0 15 43 157 182 153 183 0.89

6 17 5.5e-05 0.036 14.6 0.2 17 44 188 212 184 212 0.90

7 17 0.099 65 4.2 0.3 16 29 218 231 213 243 0.79

8 17 0.0062 4.1 8.0 0.2 17 44 254 278 250 278 0.94

9 17 0.26 1.7e+02 2.8 0.1 14 43 300 326 293 327 0.84

10 17 8.2 5.4e+03 -2.0 0.1 18 29 334 345 330 351 0.77

11 17 1.7 1.1e+03 0.2 0.1 15 27 360 372 356 386 0.79

12 17 0.22 1.5e+02 3.0 4.3 14 43 405 431 401 432 0.88

13 17 3 2e+03 -0.6 9.2 12 29 432 449 424 462 0.71

14 17 0.0058 3.9 8.1 3.5 12 43 461 489 449 490 0.79

15 17 0.1 68 4.1 0.8 17 44 495 519 491 519 0.85

16 17 0.00013 0.085 13.4 1.2 6 44 608 645 606 645 0.79

17 17 7.6 5e+03 -1.9 0.1 13 28 660 675 655 691 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0028	1.9	9.1	0.6	18	43	9	31	5	32	0.93
2	17	0.00085	0.56	10.8	0.1	18	43	68	90	64	91	0.85
3	17	3.8e-05	0.025	15.1	0.7	17	44	98	122	96	122	0.94
4	17	0.003	2	9.0	2.0	18	43	129	151	127	152	0.90
5	17	1.2e-05	0.0079	16.7	1.0	15	43	157	182	153	183	0.89
6	17	5.5e-05	0.036	14.6	0.2	17	44	188	212	184	212	0.90
7	17	0.099	65	4.2	0.3	16	29	218	231	213	243	0.79
8	17	0.0062	4.1	8.0	0.2	17	44	254	278	250	278	0.94
9	17	0.26	1.7e+02	2.8	0.1	14	43	300	326	293	327	0.84
10	17	8.2	5.4e+03	-2.0	0.1	18	29	334	345	330	351	0.77
11	17	1.7	1.1e+03	0.2	0.1	15	27	360	372	356	386	0.79
12	17	0.22	1.5e+02	3.0	4.3	14	43	405	431	401	432	0.88
13	17	3	2e+03	-0.6	9.2	12	29	432	449	424	462	0.71
14	17	0.0058	3.9	8.1	3.5	12	43	461	489	449	490	0.79
15	17	0.1	68	4.1	0.8	17	44	495	519	491	519	0.85
16	17	0.00013	0.085	13.4	1.2	6	44	608	645	606	645	0.79
17	17	7.6	5e+03	-1.9	0.1	13	28	660	675	655	691	0.75

Sequence Information

Coding Sequence: ATGTATCACAATCAGCTGGACTTTGTCTGTGACTACTGCTCAAGGACATTCACAAGAAAATATAATTTACAGACACACATAGAAAACTGTCATGTTAACTCATCATCCCACTGTGATATTTGTGAACAAAGTTTCGGCAGTCCGGCTGGATTACAACTCCATCTATCGAGAGGACACAACAACTATGGCCAGTCGTTTCCAGAATGCGATATATGTGGCAGAATATTTACAAGAAAGCAAAATATCACATCACATATGATCACTGTACATTTACAAGGGCTAGGTGACGATATACGATGTAAATTATGTGATAAAACATTTACCACAGAGAGGAATTTAAAGAGGCATATGAACCAACAACATAATCCAGATGTGGAGTATCCTACATGCTATTATTGCAACAAGGTTTTTAAAGGAAAACACTCTTTGATCTCACACATCCATGCAGTTCATAATGCCAACGAAAAAGATGCTATAAAATGTCATTTGTGTGAGAAAGTTTACACAAATACAAGGAATTTAAAGAGACATGTTGAAATGTTTCATGGTGAAAGAGGAGAATTCAGATGTGATATTTGCCCTAAAGTGTATACTTCAAATCAGAGTTTAAGAAGGCACCTCCGTACAGCGCATAGTACGGATAGTCACGAACAATTTACTTGCAACTCGTGCCGTAAAATTATCGTCGGTAGAGAAAACTATGAAAGTCATGTACAGTATATTCATTCAGAAGTGGAAAATAAATTTAATGTCATCGATATTGTTTGTGAAACATGCCACCAGACGTACGAAGAAGAATCACAATTACGGCAGCATATAAAGAAAGATCATTCTTTCAAAGTGTTTTATAAATACTGTAAAAGTGTGTTGTTGAAGCAGTATGGATCTGGGTTTGTTAGTAATATGTATAATTGTGAATATTGTCAGCATGCTTTCCCGAGTGTGTATGAATTGAAAGATCATATGCGGATCAATCATGATACTGAATACTCTCTATCAACTTGCAATGTATGTTTCAACAAGTTTTTCTCCAAGGAAACAATGAGCGCCCACAAGAAAGTGTGTCTACCCCCACCCAACGTAAATTCTTGCTGTCACTGCGATAAATTATTTACTGATATCTCAAGTTTAGAATTCCATACAAGGATCTTTCATCCCCAAGCTCAAATTGCTGACTCCAACATCTCTTCAACCAATGTAGAGGAAGACTTATCTACATCCTTTAAATGTCTTCATTGCGATCGGATGTATTATAGCGATCGTTCTTTGAAACATCATATAAAGTTGAAACACACGTCCGATGAGCAGGTTGAATGTGAATTCTGCGGTAAAATTTGCAGCAACAAATACTATTTGGCTTCCCATATAAAAATAGTTCACAACAATGATTCTTGGTCTCGATGCGAGTACTGCGATAAACAGTTCAAATCTAAACGGAATATTAGAAGGCATATTGAATACACTCATCTTGGGATGCAGAGATACAAATGTATAGAATGTGAGACGTTATTTAAAGAGAAGCGCAGTTTACGGAAACACGTTAGAACAAAACATCCCAATTCTGCTGCTTTTCCTCAATGTCACATATGCCACAAACGGTTCGAATCGGCAAAATCCTGTAAAATACATCTAAAACTATTACATTCTTTTAATATGAATACACATCCTTGCCATTTATGCTCTATGTCATTTAGCTCAAGTGAAGCTTTGACTATACATTTGAACACAAAACATTTAGCCGAAGACGAGATATATAAATGTGAGGAGTGTAATCTCGTTTTTAAAGGACAGGAACGCTTCGACAGACACAATGGAGTGAGCCATGTGAATCTTGTACCTAATATAAAGCAAAAAGTTTTACCCAGGTGCATTATGTGCATGAAGGATTTCAGCACTCGCAAAACATTAAAAAGGCATATTAAAAAGTTTCATAATGAGTTCGATATTGATGAATTGGCCAATTTTGGGTCGATACGACGAACATTTATTATTGATTGCGAAGATTGCATTAAAAATTTTAGTGATGAATTTCACTTTAATGTGTACCAGAAAATTAAACATTTGAAAGATTCAATTATATTCAAATGTGAAAACTGTCATTGTTCGTTCAATTCTTTAGAATATGCCATTCAAAGATATAAGATTACTAATGGAGATGCGTGTAAAACGAAAGCAATTCTGAGCGAACTTTGTACTACGGAAATGAGTGAGGAAGACTCTGTATTTTCTGGCTTCGGTTCTTTGCATCAACTACCAGAGAGCACGACGAGTGAATTTATCATCAAACAGGAACCGTTAGAAGAATTAATGAATGAAGATAATATCAAAACGGAACCCATGTCGCCATAA
Protein Sequence: MYHNQLDFVCDYCSRTFTRKYNLQTHIENCHVNSSSHCDICEQSFGSPAGLQLHLSRGHNNYGQSFPECDICGRIFTRKQNITSHMITVHLQGLGDDIRCKLCDKTFTTERNLKRHMNQQHNPDVEYPTCYYCNKVFKGKHSLISHIHAVHNANEKDAIKCHLCEKVYTNTRNLKRHVEMFHGERGEFRCDICPKVYTSNQSLRRHLRTAHSTDSHEQFTCNSCRKIIVGRENYESHVQYIHSEVENKFNVIDIVCETCHQTYEEESQLRQHIKKDHSFKVFYKYCKSVLLKQYGSGFVSNMYNCEYCQHAFPSVYELKDHMRINHDTEYSLSTCNVCFNKFFSKETMSAHKKVCLPPPNVNSCCHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNVEEDLSTSFKCLHCDRMYYSDRSLKHHIKLKHTSDEQVECEFCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTHPCHLCSMSFSSSEALTIHLNTKHLAEDEIYKCEECNLVFKGQERFDRHNGVSHVNLVPNIKQKVLPRCIMCMKDFSTRKTLKRHIKKFHNEFDIDELANFGSIRRTFIIDCEDCIKNFSDEFHFNVYQKIKHLKDSIIFKCENCHCSFNSLEYAIQRYKITNGDACKTKAILSELCTTEMSEEDSVFSGFGSLHQLPESTTSEFIIKQEPLEELMNEDNIKTEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677880;
90% Identity: iTF_00707186;
80% Identity: iTF_01502315;